mRNA_E_fasciculatus_S2_contig7713.15885.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7713.15885.1
Unique NamemRNA_E_fasciculatus_S2_contig7713.15885.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Trinucleotide (repeat containing 4, isoform CRA_d n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV60_ECTSI)

HSP 1 Score: 581 bits (1497), Expect = 3.120e-205
Identity = 338/347 (97.41%), Postives = 340/347 (97.98%), Query Frame = 1 
Query:   13 NQGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGAQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXG--TRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPD 1047
            ++GQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGG QAPGAPAQGSYVYYPYGAPGYPPQPGGPGQ YHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   TRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGF GFVSYS PSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPD
Sbjct:  112 DRGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGGQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQ-YHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGF-GFVSYSLPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPD 456
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BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BYN5_9STRA)

HSP 1 Score: 248 bits (634), Expect = 1.400e-73
Identity = 163/362 (45.03%), Postives = 206/362 (56.91%), Query Frame = 1 
Query:    4 LCYNQGQNPLQVRPAEGQ------AEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGL-IGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMS--GMPYGMAYGGAQAP---GAPAQGSYVYYPYGAPGYPPQP-----------GGPGQQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            L +  G+ P+Q+RPA G        EQENKLF+GM  ++A+E+ IR VFA +G +REI++IRN DG+NKGCAF+KY+ R SAL AI  L+ +  M G  RPL+VKFAD K   +A    +    +GSPGR  SG +P +                PY +P  P+ P+  +    P G+ +  +Q P   G  +  +++Y P G  GYP  P           GG G Q   G PS                                       TRP EGPPGANLFIYHLP DL+DADLATAFAPFG+V+SAKVY+D+ +GESKGF GFVSY   + A+AAI QMNGFQIGSKRLKVQHKR
Sbjct:  191 LTFTNGRKPVQIRPAIGSNSTPTTPEQENKLFIGMTSRNADENAIREVFASFGEIREIYIIRNADGSNKGCAFLKYSQRDSALSAITMLNNKVVMDGASRPLIVKFADTKAQRRARGNGMSSRGLGSPGRGQSGHNPSS----------------PYFIPPVPVYPNYQAQRAPPIGIPHQYSQYPPQYGQSSSQNFMYVPTGPYGYPSAPFNHNQMGNHSGGGSGAQQPGGAPSAFEPVPNPNHAVHPSRGSPRTSPAPGKVYQHRSDGPNTNTRPKEGPPGANLFIYHLPHDLTDADLATAFAPFGNVISAKVYVDKFTGESKGF-GFVSYDVVTSADAAIEQMNGFQIGSKRLKVQHKR 535
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBS7_9STRA)

HSP 1 Score: 230 bits (587), Expect = 9.670e-68
Identity = 176/354 (49.72%), Postives = 204/354 (57.63%), Query Frame = 1 
Query:   22 QNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGAQAPGAPAQGSYVYYPYGAPGYPPQP-------------------GGPGQQ--YHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            QN LQVRPAEG  E++NKLFVGM PK+ANE E+R VF+ +G LRE+H+IRN DG+NKGCAFVK+  R+ A+ AI+ALHE+YT++G PRPLVVKFADN +        L G I  PG   S P+     W                              P G A G     G   QG+ + Y YG  GY                       G  GQQ  Y   PP+      XXXXXXXXXXXXXXXXX                 RP EGP  +NLFIYHLP DL+DADLATAFA FG+V+SAKVY+DR + ESKGF GFVSY  P  A AAI  MNGFQIG+KRLKVQHKR
Sbjct:   99 QNALQVRPAEGHNERDNKLFVGMVPKAANEQELRKVFSSFGELREVHIIRNSDGSNKGCAFVKFMERECAVQAIDALHERYTLEGAPRPLVVKFADNNK-RNVVPRMLTGPI--PGGTDSSPY-----WS-----------------------------PPGGALGNLALAGGSQQGAPM-YSYGG-GYXXXXXXXXXXXXXXXXXXXXXXXGSSGQQMGYPPVPPAGPSAXXXXXXXXXXXXXXXXXXXVPQGGGPSALVEELTPARPQEGPAKSNLFIYHLPHDLTDADLATAFASFGNVISAKVYVDRVTNESKGF-GFVSYDNPEAAAAAIVHMNGFQIGTKRLKVQHKR 412
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YXA3_9STRA)

HSP 1 Score: 226 bits (576), Expect = 7.550e-65
Identity = 154/341 (45.16%), Postives = 188/341 (55.13%), Query Frame = 1 
Query:   28 PLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQA----AAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMS--PHM----MSGMPYGMAYGGAQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            P QV+PAE    QENKLF+GM  + A EDE+R +FAP+G +REI++IRN DGT+K  AF++Y  R +A++AIEALH    M+G  RPL+VKFAD K         +  R    IG P     GP+P                G+  PM  PP+   PH     M   P+ M + G   PG P  G  +Y P G   YPP P  P    + G    S   G                                  RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+DR +G+SKGF GFVSY     AE+AI QMNGFQIG+KRLKVQHKR
Sbjct:  255 PAQVKPAEPSV-QENKLFIGMLSRRAGEDEVRELFAPFGEIREIYMIRNGDGTSKCAAFLRYVGRDAAVNAIEALHNNLVMEGAARPLIVKFADTKHQRHVRQMRSVRRHEMFIGGPAGGYPGPYP----------------GHHMPMGPPPVGGPPHQYAAHMGAPPHQMQHYGGPYPG-PGAGGQMYNPMG---YPPAPHYPSPHPYGGF---SERQGQGPDGGHQHQSTHPQRMKDGIRGNPRHHNQSTNPRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGDSKGF-GFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 570
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LNL8_ECTSI)

HSP 1 Score: 222 bits (566), Expect = 6.210e-64
Identity = 180/380 (47.37%), Postives = 215/380 (56.58%), Query Frame = 1 
Query:   25 NPLQVRPAEGQ--------------AEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAG-------RLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGA---------------GYPYPMPGPPMSPHMMSGMPYGMAYGGAQAPGAPA--QGSYVYYPYGAPG-YPPQ-------PGGPGQQYH--SGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            NP+QVRPA+ Q               ++ENKLFVGM P  A++  +  VF+ +G + EI+ +RN DGT KGCAFVK++TR +A+ AIEALHE+ TM G  R LVVKFAD K+  Q A G       R    +G  GR+  G     G W      GG+                 GYPY + GPP   +  S   YG  Y     PG P    G YV Y    P  YP Q         G G + H  S PP     GG  XXXXXXXXXXXX                  G RP EGPPGANLFIYHLP DL+DADLATAFAPFGHV+SAKV++D+ + ESKGF GFVSY+ P+ AE AI++MNGFQIGSKRLKVQHK+
Sbjct:   43 NPVQVRPADSQMGDDRLGPNGRVAPVDRENKLFVGMLPHDADDMTLTEVFSRFGEITEIYCMRNPDGTPKGCAFVKFSTRSAAIAAIEALHEKCTMDGATRALVVKFADVKK-AQTAKGWMVPPDARGASPLGYNGRYHGGGTSVGGYWQATGAPGGRDVYSKGREVYPDYANHRGYPYQV-GPPGGGYSQS---YGPEY--PHHPGQPQARHGGYVAYSNLNPSHYPAQVDRSLSPSSGAGDRSHNFSSPPGGPVPGGIGXXXXXXXXXXXXRGEHGG------------GARPQEGPPGANLFIYHLPNDLTDADLATAFAPFGHVVSAKVFLDKRTQESKGF-GFVSYNHPAEAEVAISKMNGFQIGSKRLKVQHKK 402
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BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: RNA-binding (domain-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FGE6_9STRA)

HSP 1 Score: 217 bits (552), Expect = 5.910e-62
Identity = 175/359 (48.75%), Postives = 208/359 (57.94%), Query Frame = 1 
Query:   28 PLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGR----------LGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYP----MPGPPMSPHMMSGMPYGMAYGGAQAPGAPAQGS--YVYYP-YGAPGYPPQPGGPGQQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-----------GTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            P QV+PAE     ENKLFVGM  + A EDEIR +FAP+G +REI++IRN DG++K  AF++Y  R SA+ AIE LH    ++G  RPL+VKFADNK   Q    R          +G  +G PG +  G H       G P        + YP    M GPP + H+         Y GA  PG P  G    +Y P Y +P           Q++ GPP P   GG             XXXXXXXXXXXXXXXXXXX             RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+DR + ESKGF GFVSY     AE+AI QMNGFQIG+KRLKVQHKR
Sbjct:  158 PAQVKPAEPSVP-ENKLFVGMLSRKAGEDEIRELFAPFGEIREIYMIRNADGSSKCAAFLRYIDRDSAIQAIEMLHNNLVLEGAARPLIVKFADNKHQRQQRHMRNVRRQELMTVMGPGVGYPGIY-PGHHMAMAPLPGAPS-------HQYPPHHQMGGPPHAHHLPQ-------YHGAPYPGGPGGGGPPAMYNPMYPSP-----------QHYGGPPHPYGAGGFQDPNQNNRQGSHXXXXXXXXXXXXXXXXXXXXXXXXXPNQAANPRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTDESKGF-GFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 488
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Rna (binding protein n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U5L7_9STRA)

HSP 1 Score: 214 bits (545), Expect = 9.170e-61
Identity = 173/415 (41.69%), Postives = 211/415 (50.84%), Query Frame = 1 
Query:   22 QNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAG--------RLGG--------------------LIGSPGRHGSGPHPE------------AGGWMG----HPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMA--YGGAQAPGA-PAQGSYV-----------YYPYGAPGYPPQ--------PGGPGQQYHSGPP----------------SPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            QN LQVRPA+   E+ENKLFVGM PK+ +E  +  +FAP+G ++EIH+IR+ +G  KGCAF+K+  R SA+ AIEAL+E+  ++G  RP+VV+FA++KR  +   G        R GG                    ++  PG  G   HP             AGG +G     P   G+G       PG   SP+  SG PY M   +G  QA    P Q   V           Y PYGA   PP         PGGP  Q H                    SP   GG                             XXXG++P EGP GANLFIYHLP DL+DADLATAF PFG V+SAKVY+D+ SGESKGF GFVSY  P  A+AAI  MNGFQIG+KRLKVQHKR
Sbjct:  106 QNALQVRPADLHTERENKLFVGMLPKNVDEGLVEGLFAPFGKIKEIHIIRSVEGEGKGCAFLKFVERSSAIQAIEALNERQVVEGASRPMVVRFAESKRSGEGGQGAGVXXXXXRRGGXXXXXXXXXXGPMEGLLMAPMMMVPGPLGHSLHPPNLPLRGGSEGGAAGGGLGVAGLSPTGRGKGXXXXXEAPGGGSSPY--SGAPYWMLGPHGQPQASAHFPFQAGPVPMGMLGLPHHQYLPYGAVRAPPYLYYPPYFGPGGP--QGHGAAADGXXXXXXXXXXXXXGSPFVYGGGVPGGMRVNTAVGAPHGAGHAGAFASRGGXXXGSKPLEGPAGANLFIYHLPHDLTDADLATAFNPFGTVVSAKVYVDKNSGESKGF-GFVSYDSPLAADAAIKAMNGFQIGTKRLKVQHKR 515
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FPP7_PHATC)

HSP 1 Score: 210 bits (534), Expect = 5.170e-60
Identity = 153/344 (44.48%), Postives = 185/344 (53.78%), Query Frame = 1 
Query:   34 QVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNK-----------RGTQAAAGRLGGLIGSPGRHGSGPHPEAG-GWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYG---GAQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            QV+PAE     ENKLFVGM  + A E EIR +F P+G +RE+++IRN DG++K  AF++Y  R +A+ AIE L+  Y M+G  RPL+V+FADNK           R  +  A   GG    P      PH +   G  GHPGA  Q   Y  P+P     PH +       AYG   GA  PG P    Y+Y P              QQY    P+P+                                      RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+D+ SGESKGF GFVSY     AEAAI QMNGFQIG+KRLKVQHKR
Sbjct:  198 QVKPAEPSVP-ENKLFVGMLSRKATEVEIRELFEPFGEIREVYMIRNADGSSKCAAFLRYMKRGAAVQAIETLNNIYMMEGAARPLIVRFADNKHQRHQRQIRNIRRHEMIAAMGGGYATYP------PHVQVQMGMPGHPGASPQ---YTVPVP-----PHYVEA-----AYGPPNGAPMPGHP----YMYPP--------------QQYA---PTPA----------------------YIYPEHTSEETKPTNNRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDKYSGESKGF-GFVSYDSVIAAEAAIEQMNGFQIGNKRLKVQHKR 477
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Hypothetical (protein n=1 Tax=Pseudo-nitzschia australis TaxID=44445 RepID=A0A7S4AS97_9STRA)

HSP 1 Score: 213 bits (543), Expect = 6.030e-60
Identity = 163/342 (47.66%), Postives = 196/342 (57.31%), Query Frame = 1 
Query:   28 PLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGR-------LGGLIGSPGRHG-SGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGAQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX---GTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            P QV+PAE     ENKLF+GM  + A E+E+R +FAP+G +REI++IRN DGT+K  AF++Y  R SA+ AIE+LH    M+G  RPL+VKFADNK   Q    R       +  ++G P   G  GPH      MG P  G     + YP        HM  G+   M    A  PG P  G+ +Y P   P            +H G   P   GG               XXXXXXXXXXX           RP EGP GANLF+YHLP DL+DADLATAF PFG+V+SAKVY+DR +GESKGF GFVSY     AE+AI QMNGFQIG+KRLKVQHKR
Sbjct:  275 PAQVKPAEPSVP-ENKLFIGMLSRKAGEEEVRELFAPFGEIREIYMIRNADGTSKCAAFLRYIGRDSAITAIESLHNNLVMEGAARPLIVKFADNKHQRQQRHMRNVRRQELMTAVMGPPYPGGYPGPHMP----MGPPPVG---LAHQYPT-------HM--GIHQHMTQFSAPYPG-PGGGAQIYNPMAYPA----------PHHYGTSQPHPYGGFNRQQVPGGGRGDRHXXXXXXXXXXXGIPNNNQGNNPRPREGPAGANLFVYHLPHDLTDADLATAFNPFGNVISAKVYVDRYTGESKGF-GFVSYDSVISAESAIEQMNGFQIGNKRLKVQHKR 587
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CK81_9STRA)

HSP 1 Score: 211 bits (538), Expect = 6.290e-60
Identity = 170/332 (51.20%), Postives = 203/332 (61.14%), Query Frame = 1 
Query:   25 NPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTLREIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVKFADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYPYPMPGPPMSPHMMSGMPYGMAYGGAQAPGAPAQGSYVYYPYGAPGYPPQPGGPGQQYHSGPPSPSRGGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASGESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKR 1020
            N LQVR AE QAE+E KLFVGM   +A+E+++R +F+ YG +RE+H+IRN DG+NKGCAFVKY +R+ A  AI+AL+EQ TM+G PRPL+V+FAD+ +                     G HP  G         G  + Y  P  G   SP   +  PYG   GGA A  APA  +                                  XXXXXXXXXXXXXXXXXXXXXXXXXXXXX    +RP EGP  +NLFIYH P DL+DADLATAFA FG+V+SAKVY+DR + ESKGF GFVSY  P  A  AIA MNGF IG+KRLKVQ+KR
Sbjct:   90 NALQVRAAEAQAEREVKLFVGMVASTADEEDVRGIFSVYGEIREVHIIRNADGSNKGCAFVKYASREHAAAAIDALNEQMTMEGAPRPLLVRFADSSK--------------------RGAHPLRGA--------GDSSPYWSPAAGAIASPAASATNPYGEDSGGAYAAAAPADYAGAXXXXXXX--------------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRDHPSRPQEGPARSNLFIYHWPADLTDADLATAFASFGNVISAKVYMDRLTNESKGF-GFVSYDNPESAAVAIAHMNGFAIGNKRLKVQYKR 372
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7713.15885.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Trinucleotide3.120e-20597.41repeat containing 4, isoform CRA_d n=2 Tax=Ectocar... [more]
Hypothetical1.400e-7345.03protein n=1 Tax=Corethron hystrix TaxID=216773 Rep... [more]
Uncharacterized9.670e-6849.72protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized7.550e-6545.16protein n=1 Tax=Pseudo-nitzschia multistriata TaxI... [more]
Uncharacterized6.210e-6447.37protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
RNA-binding5.910e-6248.75domain-containing protein n=1 Tax=Fragilariopsis c... [more]
Rna9.170e-6141.69binding protein n=3 Tax=Monodopsidaceae TaxID=4250... [more]
Predicted5.170e-6044.48protein n=1 Tax=Phaeodactylum tricornutum (strain ... [more]
Hypothetical6.030e-6047.66protein n=1 Tax=Pseudo-nitzschia australis TaxID=4... [more]
Uncharacterized6.290e-6051.20protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7713contigE_fasciculatus_S2_contig7713:5281..6545 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start0
Seed ortholog score592.8
Seed ortholog evalue1.1e-166
Seed eggNOG ortholog2880.D7FV60
Preferred nameCELF2
Model size1065
KEGG rclassRC00002,RC00017
KEGG koko:K00852,ko:K02177,ko:K13207
KEGG ReactionR01051,R02750
KEGG Pathwayko00030,ko04320,map00030,map04320
Hectar predicted targeting categoryother localisation
GOsGO:0000003,GO:0000166,GO:0000245,GO:0000375,GO:0000377,GO:0000380,GO:0000381,GO:0000398,GO:0000900,GO:0001889,GO:0002376,GO:0003006,GO:0003674,GO:0003676,GO:0003723,GO:0003729,GO:0003730,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005654,GO:0005737,GO:0006139,GO:0006376,GO:0006396,GO:0006397,GO:0006401,GO:0006402,GO:0006417,GO:0006725,GO:0006807,GO:0006928,GO:0006950,GO:0006952,GO:0006955,GO:0006996,GO:0007010,GO:0007088,GO:0007096,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007292,GO:0007319,GO:0007346,GO:0007368,GO:0007389,GO:0007568,GO:0008016,GO:0008150,GO:0008152,GO:0008219,GO:0008340,GO:0008380,GO:0009056,GO:0009057,GO:0009314,GO:0009416,GO:0009626,GO:0009628,GO:0009648,GO:0009653,GO:0009790,GO:0009791,GO:0009792,GO:0009799,GO:0009855,GO:0009887,GO:0009889,GO:0009890,GO:0009892,GO:0009893,GO:0009894,GO:0009896,GO:0009966,GO:0009967,GO:0009987,GO:0010228,GO:0010259,GO:0010467,GO:0010468,GO:0010556,GO:0010558,GO:0010564,GO:0010604,GO:0010605,GO:0010608,GO:0010629,GO:0010638,GO:0010646,GO:0010647,GO:0010927,GO:0012501,GO:0012505,GO:0014743,GO:0014881,GO:0016020,GO:0016043,GO:0016049,GO:0016070,GO:0016071,GO:0016246,GO:0016441,GO:0016458,GO:0016477,GO:0016604,GO:0017148,GO:0019219,GO:0019222,GO:0019439,GO:0019827,GO:0019953,GO:0022412,GO:0022414,GO:0022607,GO:0022613,GO:0022618,GO:0023051,GO:0023056,GO:0030029,GO:0030036,GO:0030154,GO:0030239,GO:0030371,GO:0030718,GO:0031016,GO:0031032,GO:0031047,GO:0031090,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031329,GO:0031331,GO:0031369,GO:0031536,GO:0031965,GO:0031967,GO:0031974,GO:0031975,GO:0031981,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032504,GO:0032535,GO:0032989,GO:0032991,GO:0033043,GO:0033554,GO:0034050,GO:0034248,GO:0034249,GO:0034622,GO:0034641,GO:0034655,GO:0035194,GO:0035239,GO:0035295,GO:0035770,GO:0036002,GO:0036094,GO:0036099,GO:0036464,GO:0040007,GO:0040008,GO:0040011,GO:0040014,GO:0040018,GO:0040029,GO:0042692,GO:0042802,GO:0042803,GO:0042835,GO:0043170,GO:0043186,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043484,GO:0043933,GO:0044057,GO:0044085,GO:0044237,GO:0044238,GO:0044248,GO:0044260,GO:0044265,GO:0044270,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0044703,GO:0045087,GO:0045182,GO:0045214,GO:0045495,GO:0045595,GO:0045597,GO:0045787,GO:0045840,GO:0045927,GO:0045931,GO:0045935,GO:0046011,GO:0046483,GO:0046700,GO:0046983,GO:0048024,GO:0048232,GO:0048468,GO:0048477,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048546,GO:0048565,GO:0048568,GO:0048573,GO:0048580,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048731,GO:0048732,GO:0048856,GO:0048869,GO:0048870,GO:0050684,GO:0050789,GO:0050793,GO:0050794,GO:0050896,GO:0051094,GO:0051128,GO:0051130,GO:0051146,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051239,GO:0051240,GO:0051246,GO:0051248,GO:0051252,GO:0051254,GO:0051674,GO:0051704,GO:0051716,GO:0051726,GO:0051783,GO:0051785,GO:0055001,GO:0055002,GO:0055123,GO:0060255,GO:0060293,GO:0061008,GO:0061013,GO:0061014,GO:0061031,GO:0061061,GO:0061113,GO:0061458,GO:0065003,GO:0065007,GO:0065008,GO:0070013,GO:0070925,GO:0071704,GO:0071826,GO:0071840,GO:0080090,GO:0080151,GO:0090066,GO:0090068,GO:0090079,GO:0090257,GO:0090304,GO:0097159,GO:0097435,GO:0098727,GO:1901265,GO:1901360,GO:1901361,GO:1901363,GO:1901575,GO:1901987,GO:1901989,GO:1901990,GO:1901992,GO:1903311,GO:1903313,GO:1903522,GO:1990402,GO:1990904,GO:2000026,GO:2000028,GO:2000031,GO:2000112,GO:2000113,GO:2000241,GO:2000736,GO:2000738,GO:2001023,GO:2001025,GO:2001038,GO:2001040
Exons2
EggNOG free text desc.RNA binding
EggNOG OGsKOG0144@1,KOG0144@2759
Ec32 ortholog descriptionNucleotide-binding alpha-beta plait domain
Ec32 orthologEc-12_007440.1
EC2.7.1.15
Cds size1065
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03019,ko03041
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842434.2129636-CDS-E_fasciculatus_S2_contig7713:5280..54291696842434.2129636-CDS-E_fasciculatus_S2_contig7713:5280..5429Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7713 5281..5429 -
1696842434.2270954-CDS-E_fasciculatus_S2_contig7713:5629..65451696842434.2270954-CDS-E_fasciculatus_S2_contig7713:5629..6545Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7713 5630..6545 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7713.15885.1prot_E_fasciculatus_S2_contig7713.15885.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7713 5281..6545 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7713.15885.1

>prot_E_fasciculatus_S2_contig7713.15885.1 ID=prot_E_fasciculatus_S2_contig7713.15885.1|Name=mRNA_E_fasciculatus_S2_contig7713.15885.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=355bp
VLCYNQGQNPLQVRPAEGQAEQENKLFVGMAPKSANEDEIRAVFAPYGTL
REIHVIRNQDGTNKGCAFVKYTTRQSALDAIEALHEQYTMQGGPRPLVVK
FADNKRGTQAAAGRLGGLIGSPGRHGSGPHPEAGGWMGHPGAGGQGAGYP
YPMPGPPMSPHMMSGMPYGMAYGGAQAPGAPAQGSYVYYPYGAPGYPPQP
GGPGQQYHSGPPSPSRGGGGYGGGGHPRSPSGSDRHRARGMHEGEAGGGG
GGTRPAEGPPGANLFIYHLPQDLSDADLATAFAPFGHVLSAKVYIDRASG
ESKGFAGFVSYSQPSHAEAAIAQMNGFQIGSKRLKVQHKRRGQSTDDPDD
RDEGG
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mRNA from alignment at E_fasciculatus_S2_contig7713:5281..6545-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7713.15885.1 ID=mRNA_E_fasciculatus_S2_contig7713.15885.1|Name=mRNA_E_fasciculatus_S2_contig7713.15885.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1265bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7713:5281..6545- (Ectocarpus fasciculatus EfasUO2)
GTGCTTTGCTATAACCAGGGTCAGAATCCGCTGCAGGTGCGACCCGCGGA
AGGCCAGGCTGAGCAGGAGAACAAACTTTTCGTCGGGATGGCTCCCAAGT
CAGCCAACGAGGACGAGATTCGGGCCGTATTCGCGCCGTACGGCACGCTC
CGCGAGATTCATGTCATTCGTAACCAGGACGGCACCAACAAGGGCTGTGC
GTTCGTCAAGTACACCACTCGCCAGAGCGCTCTCGACGCTATCGAAGCCC
TCCACGAGCAATACACGATGCAGGGCGGGCCTCGCCCGCTGGTGGTTAAG
TTTGCCGACAACAAGCGCGGAACGCAGGCCGCGGCGGGTCGTCTCGGCGG
CCTCATTGGCTCCCCCGGCCGCCACGGGAGCGGCCCCCACCCCGAGGCTG
GCGGTTGGATGGGTCACCCGGGAGCAGGCGGGCAAGGCGCGGGGTACCCG
TACCCCATGCCGGGGCCACCGATGTCTCCTCACATGATGAGTGGCATGCC
ATACGGAATGGCTTACGGGGGTGCGCAGGCTCCGGGCGCCCCGGCGCAAG
GGAGCTACGTCTACTACCCCTACGGCGCACCGGGGTACCCCCCTCAGCCG
GGCGGACCCGGACAGCAGTACCACTCTGGACCACCGAGTCCATCACGGGG
AGGTGGGGGCTACGGTGGTGGAGGGCACCCGCGGTCTCCATCTGGGTCCG
ACCGCCACAGGGCGCGCGGTATGCACGAAGGTGAAGCTGGTGGGGGCGGG
GGTGGCACCCGGCCGGCCGAGGGCCCCCCGGGGGCGAACCTGTTCATTTA
CCACCTGCCCCAGGATCTTTCGGACGCGGATTTGGCCACTGCATTCGCAC
CCTTTGGGCATGTGCTGAGCGCCAAGGTGTACATCGACCGGGCTTCGGGG
GAAAGCAAGGGCTTCGGTGAGGAGGCTTCGGTGTCGTTATTGCTAAATAG
TCGGGTATCTAGGTACTGCACCTATAGTGTTTTTGTAGATAATACTCCGG
AGAACTACACACCTAGTAGGTTGCCTAGCTGGTCGTTGTTGTAACCAATC
CATTTTACCATGAATAAACGGTTTTATGTGCCTGTCGGGCCGGGTCATAT
GGATGTGATGCACGAGCAGGTTTCGTGTCCTACAGCCAGCCATCGCACGC
AGAGGCCGCCATCGCGCAGATGAATGGCTTCCAGATCGGGTCTAAGAGGC
TCAAAGTGCAGCACAAGCGCCGTGGGCAGTCGACCGATGACCCAGACGAT
CGCGACGAGGGAGGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7713:5281..6545-

>mRNA_E_fasciculatus_S2_contig7713.15885.1 ID=mRNA_E_fasciculatus_S2_contig7713.15885.1|Name=mRNA_E_fasciculatus_S2_contig7713.15885.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1065bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7713:5281..6545- (Ectocarpus fasciculatus EfasUO2)
GTGCTTTGCTATAACCAGGGTCAGAATCCGCTGCAGGTGCGACCCGCGGA
AGGCCAGGCTGAGCAGGAGAACAAACTTTTCGTCGGGATGGCTCCCAAGT
CAGCCAACGAGGACGAGATTCGGGCCGTATTCGCGCCGTACGGCACGCTC
CGCGAGATTCATGTCATTCGTAACCAGGACGGCACCAACAAGGGCTGTGC
GTTCGTCAAGTACACCACTCGCCAGAGCGCTCTCGACGCTATCGAAGCCC
TCCACGAGCAATACACGATGCAGGGCGGGCCTCGCCCGCTGGTGGTTAAG
TTTGCCGACAACAAGCGCGGAACGCAGGCCGCGGCGGGTCGTCTCGGCGG
CCTCATTGGCTCCCCCGGCCGCCACGGGAGCGGCCCCCACCCCGAGGCTG
GCGGTTGGATGGGTCACCCGGGAGCAGGCGGGCAAGGCGCGGGGTACCCG
TACCCCATGCCGGGGCCACCGATGTCTCCTCACATGATGAGTGGCATGCC
ATACGGAATGGCTTACGGGGGTGCGCAGGCTCCGGGCGCCCCGGCGCAAG
GGAGCTACGTCTACTACCCCTACGGCGCACCGGGGTACCCCCCTCAGCCG
GGCGGACCCGGACAGCAGTACCACTCTGGACCACCGAGTCCATCACGGGG
AGGTGGGGGCTACGGTGGTGGAGGGCACCCGCGGTCTCCATCTGGGTCCG
ACCGCCACAGGGCGCGCGGTATGCACGAAGGTGAAGCTGGTGGGGGCGGG
GGTGGCACCCGGCCGGCCGAGGGCCCCCCGGGGGCGAACCTGTTCATTTA
CCACCTGCCCCAGGATCTTTCGGACGCGGATTTGGCCACTGCATTCGCAC
CCTTTGGGCATGTGCTGAGCGCCAAGGTGTACATCGACCGGGCTTCGGGG
GAAAGCAAGGGCTTCGCAGGTTTCGTGTCCTACAGCCAGCCATCGCACGC
AGAGGCCGCCATCGCGCAGATGAATGGCTTCCAGATCGGGTCTAAGAGGC
TCAAAGTGCAGCACAAGCGCCGTGGGCAGTCGACCGATGACCCAGACGAT
CGCGACGAGGGAGGG
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