mRNA_E_fasciculatus_S2_contig770.15874.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig770.15874.1
Unique NamemRNA_E_fasciculatus_S2_contig770.15874.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Nephroretinin (4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAY6_ECTSI)

HSP 1 Score: 552 bits (1423), Expect = 1.420e-173
Identity = 290/320 (90.62%), Postives = 292/320 (91.25%), Query Frame = 1
Query:    1 RSIQLLPGGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLICMRG 960
            RSIQLLPGGAPEH LSK GKGSLGVG VSR+ Y VSEDGGAKYIHCVEEA HQQG        XXXXXXX XXXX          DVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELP GRACHKRIAYSNPWN+TRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAP GTN RKEAFLFVNDSEGQNEECLLICMRG
Sbjct: 2721 RSIQLLPGGAPEHRLSKRGKGSLGVGRVSREPYGVSEDGGAKYIHCVEEADHQQGADDKGRAGXXXXXXXXXXXXXXXXXXXXXDDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPLGRACHKRIAYSNPWNTTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPGGTNVRKEAFLFVNDSEGQNEECLLICMRG 3040          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU49_9STRA)

HSP 1 Score: 283 bits (725), Expect = 2.700e-80
Identity = 161/347 (46.40%), Postives = 204/347 (58.79%), Query Frame = 1
Query:    1 RSIQLLP----GGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVD--VQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLE----------------------VAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLICMR 957
            RSI+LLP    G  P    S       GV G +       +D   K++HCV+  G   G                    + G  +    D  V E+ +K RVG FPS   FYLL+YDD  +  LYE WHV+V +RLR+DVH+ LGQ S ADL+VRGDRYSR+VR F+S PA+  F+P + FQLV GAYNRV++R+RP  TG  KI VH+VDVD+ E+VGAWLATATA+PPV+TK+Y+++LP G+  HKRIAY+NPW   R FRL SSD  ++ PR+  LE                      VA GGTGF+RLW  AP+   S  E FLFVND   QNEE  +  +R
Sbjct: 2961 RSIRLLPSAGWGLLPPSEAS-------GVSGAA-------DDPAEKFVHCVDRTG---GNVVVEWRQRQQQASAPAVVGSKGHTSKLSSDPSVSEIFIKYRVGAFPSAGEFYLLLYDDRDRTRLYEIWHVMVHSRLRLDVHATLGQASAADLVVRGDRYSRRVRCFTSAPADCEFDPPSTFQLVSGAYNRVDMRYRPTRTGGSKIQVHMVDVDTQELVGAWLATATALPPVVTKTYELDLPVGKESHKRIAYANPWLQARAFRLRSSDETVMAPRHGGLEXXXXXXXXXXXXXXXXXXXXXXVAAGGTGFIRLWLHAPDAAGSA-EVFLFVNDENDQNEEYNMDMLR 3289          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CDE8_9STRA)

HSP 1 Score: 253 bits (646), Expect = 2.050e-78
Identity = 124/215 (57.67%), Postives = 153/215 (71.16%), Query Frame = 1
Query:  313 FYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLICMR 957
            FYLL++DD  +  LYE WHV+V +RLR+DVH+ LGQ S A+L+VRGDRYSR+VR FSS P +  F+P   FQLV GAYNRV                H+VDVD+ E+VGAWLATATA+PPV+TK+ +++LP G+  HKRIAY+NPW+  R FRL SSD  ++ PR+  LE A GGTGF+RLW  AP+   S  E FLFVND   QNEECLLI MR
Sbjct:    9 FYLLLHDDRDRTRLYEIWHVMVHSRLRLDVHATLGQASAANLVVRGDRYSRRVRCFSSAPGDCEFDPPTTFQLVSGAYNRV----------------HMVDVDTQELVGAWLATATALPPVVTKTNELDLPVGKESHKRIAYANPWSQARAFRLRSSDETVMAPRHGGLEAAAGGTGFIRLWLHAPDAAGSA-EVFLFVNDENDQNEECLLIRMR 206          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=2 Tax=Triparma pacifica TaxID=91992 RepID=A0A7S2QW27_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.210e-70
Identity = 134/316 (42.41%), Postives = 196/316 (62.03%), Query Frame = 1
Query:    1 RSIQLLPGGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
            RSIQLL  G+P   L  H   S GVG               KY+HCVE   ++                        GG   G  + QEVL+K R G+FPS   FY+LVYDDHYQG ++E WHV+VQ+RLR+DV++ +GQ +P++L+++GD+++R+V  +SS PAE  F+P+  FQLVPGA+NR  ++FR    GS+KIH+H+VD+D+ E+V AWL T  +  PVITK YDV++P G  C K+++++N W+ TR ++L SSDP +++PR  ++++     G++RL+F  P      +E  LFVND +  NEE  L+
Sbjct: 2189 RSIQLL--GSPTS-LDHHDYESEGVGSH-------------KYVHCVEMNSNR------------------VVVDWRGGAQAG--ETQEVLIKYRCGKFPSVGEFYILVYDDHYQGVVHECWHVVVQSRLRLDVNAAVGQSTPSELVIQGDKFARRVMVYSSSPAETFFDPSRPFQLVPGAFNRAAVKFRMKQAGSKKIHIHMVDLDTKELVCAWLVTVNSALPVITKVYDVQVPIGVGCSKKLSFTNQWDRTRRYKLMSSDPAVMKPRNPTVDIEPRAIGYMRLYFN-PIDVVGTEEVILFVNDEQDMNEEAFLL 2467          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2HFZ8_9STRA)

HSP 1 Score: 225 bits (574), Expect = 1.990e-66
Identity = 109/231 (47.19%), Postives = 152/231 (65.80%), Query Frame = 1
Query:  262 QEVLVKC-RVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLST-GSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
            QE+ +K  ++G FP R  FY+L+YDD Y   L E WHV V +RLR D+ + LGQ SP +L+VRGD Y R+V+A+SS P E+ F PA+ F L P  YN++ELR+ P  T G R++HVHLVD+ + E+V AW+ T  A PP ITK Y V++  G   HK++++ NPW+  RLFRL S+DP ++RP+ + LE+      F++L+ + P       E +L VND E QNEEC  I
Sbjct:   63 QELHLKYWKLGAFPFRADFYVLIYDDRYSARLNEIWHVTVASRLRKDIQATLGQASPMELVVRGDGYRRRVKAYSSEPREIKFLPADVFHLAPQQYNKLELRWTPFGTDGMRRVHVHLVDIQTGELVCAWIVTTVATPPAITKDYQVDVAVGEGSHKKVSFDNPWSRHRLFRLRSTDPNVMRPKTDELEIPPRDRAFIKLYIS-PFLRPGFAEVYLLVNDEEDQNEECFRI 292          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=1 Tax=Saprolegnia diclina (strain VS20) TaxID=1156394 RepID=T0RSH2_SAPDV)

HSP 1 Score: 229 bits (583), Expect = 1.690e-61
Identity = 108/229 (47.16%), Postives = 154/229 (67.25%), Query Frame = 1
Query:  262 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
            QE+ +K RVG +PS   FYLL+YDD Y   L+E W + +Q+ +R+D+H+ +GQ    +LIV+GD   R+V  FSS P E+ F+P+  FQL+P A+NR+E+RF  +   +++I VH+VDVDS ++VGAWL   T   P++TK +DV LP G    K+I+Y NPW+  R F L S+DP I++PR   L++ G G G+LRL FA P      K+ +LF+ND + QNEECLL 
Sbjct: 3386 QEIYIKYRVGDYPSLGVFYLLLYDDMYHARLHEIWRIHIQSMMRLDLHATMGQGVQNELIVKGDAMPRRVSCFSSHPTELQFKPSGIFQLIPHAFNRIEVRFATMQVCAKQIVVHVVDVDSRDLVGAWLLNTTVSEPIVTKVFDVTLPTGVPVLKKISYRNPWDEDRSFVLRSNDPSIMKPREPRLQLQGNGDGYLRLAFA-PHSLPCSKKVYLFINDHQDQNEECLLF 3613          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XUC6_9STRA)

HSP 1 Score: 227 bits (579), Expect = 4.690e-61
Identity = 135/327 (41.28%), Postives = 191/327 (58.41%), Query Frame = 1
Query:    1 RSIQLLPGGA-PEHHLSKHGKGSL-GVGGVSR-DSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRP--LSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPE-GTNSRKEAFLFVNDSEGQNEECLLICMRGV 963
            R IQL+  GA P   +     G L G G V+R D++ +     A ++H ++ +G+ +                        G +G G +  EV +K RV  FP    FY+LVY D YQ  L E WHV V ARLR+D+H+  GQ   ADL+VRGD ++R+VRA+SS P EVSF+ A  F LV G+YNR+ LR+RP  LS+ +++I VHL+D D+ ++V  W+ATAT   PV+T+++DV++       KRI YSNPW+  R F+L SS+P ++RPR   LEV    +G++RL          + +E  LFVND E   EEC L+ +RGV
Sbjct: 1249 RCIQLVYDGASPGIGIPSDPDGELLGDGAVARYDAFGMKAPRSALFLHTIDLSGNNR-----------------VVVEWREGVSGAGAN-PEVWLKYRVPPFPGTGEFYVLVYRDPYQAQLRELWHVHVNARLRLDLHATAGQAVTADLVVRGDSFTRRVRAYSSLPKEVSFDQAGEFALVAGSYNRIGLRYRPTGLSSVTKRISVHLIDADTQQLVCGWIATATTAAPVVTRTFDVDVTVDDEASKRIPYSNPWSRRRAFKLISSNPGLVRPRSARLEVEARASGYIRLALNGDAIDAGAVEEVLLFVNDDEDNTEECFLLRLRGV 1557          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=2 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XXV1_9STRA)

HSP 1 Score: 226 bits (575), Expect = 1.890e-60
Identity = 114/229 (49.78%), Postives = 151/229 (65.94%), Query Frame = 1
Query:  262 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
            QE+ VK RVG++PS   FYLL+Y+D Y   L+E W + VQA LR+D+ + +GQ    +LI++GD   R+VR +SS P EV F P   FQL+P A+NR+EL F  +    ++I V+LVDVDS E+VG+WL   T   PV+TK +DV LP G    K+I+Y NPW+  RLF L SSDP I++PR   L + G G GFLRL FA P      K+ +LF+ND   QNEECLL+
Sbjct: 3054 QEIFVKYRVGEYPSTGEFYLLLYEDMYHARLFEIWRICVQAMLRLDLQASMGQGVRNELIIKGDTMPRRVRCYSSQPHEVQFNPDRIFQLLPHAFNRIELLFCSMEIRIKQIVVNLVDVDSYELVGSWLLNTTTTEPVVTKVFDVTLPLGVPVLKKISYRNPWDDDRLFILRSSDPSIMKPRERKLLLPGYGDGFLRLAFA-PHSIACSKKVYLFINDGSDQNEECLLL 3281          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Uncharacterized (protein n=11 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H6W9_9STRA)

HSP 1 Score: 225 bits (574), Expect = 2.590e-60
Identity = 108/229 (47.16%), Postives = 155/229 (67.69%), Query Frame = 1
Query:  262 QEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
            QE+  K RVG++PS   FYLL+Y+D Y   LYE W + VQ+ LR+D+H+ +GQ    +LI++GD   R+VR +SS PA+V F P   FQL+P A+NR+EL +  +  G+ ++ +++VDVDS E++G+WL  A    P++TK +DV LP G    K+I+Y NPW S R+F L +SDP I++PR  +L ++GG  GFLRL FA P      K+ +LF+ND   QNEECLL+
Sbjct: 3377 QEIYFKYRVGEYPSSGEFYLLLYEDMYHAVLYEIWRLCVQSMLRLDLHATMGQGVRNELILKGDTMPRRVRCYSSQPAKVHFNPERIFQLLPHAFNRIELLYCSMDVGALQVLINVVDVDSHELIGSWLLNANTSEPLVTKVFDVTLPLGVPVLKKISYRNPWESDRMFVLRTSDPSIMKPREPTLRLSGGSDGFLRLAFA-PYSIPCTKKVYLFINDGSDQNEECLLL 3604          
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2C1Z8_9STRA)

HSP 1 Score: 224 bits (571), Expect = 5.640e-60
Identity = 128/318 (40.25%), Postives = 178/318 (55.97%), Query Frame = 1
Query:    1 RSIQLLPGGAPEHHLSKHGKGSLGVGGVSRDSYVVSEDGGAKYIHCVEEAGHQQGGXXXXXXXXXXXXXXAXXXXAMGGCAGGGVDVQEVLVKC-RVGQFPSRKGFYLLVYDDHYQGSLYETWHVIVQARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQLVPGAYNRVELRFRPLST-GSRKIHVHLVDVDSMEIVGAWLATATAMPPVITKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVAGGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLI 948
            R ++LLPGG      +  G G++G       ++V   +G  KY+H V+  G                        +  G        QE+L+K  ++G FPS   FY+L++DD ++  L E WHVIV +RLR DV + LGQ SP +  V GD + R VRA++S   E  F P++ FQLVP A N  +  F PL   G+RK HVHLVDVD+ ++V AW+ T  A PP +TK YDV++  G A HK+I+Y NPWN  R ++L SSDP ++RP+   L++   G  F+RL+ A P     R E FL VND  GQNE+C  +
Sbjct: 1569 RCVRLLPGGGTVD--AARGAGAVGP------THVPGANG-RKYVHLVDHGGR----------------VVVEWRESTDGA-------QEILIKYWKLGAFPSMGDFYILIFDDPWRCRLSEIWHVIVASRLRKDVQAKLGQASPIEFTVPGDNHLRHVRAYASNELETRFLPSSVFQLVPNAVNSFKASFTPLGAPGTRKTHVHLVDVDTKQLVAAWILTCVAAPPQVTKDYDVDVRVGEAAHKKISYENPWNRRRSYQLMSSDPNVMRPKVNELQIQPHGREFMRLYIA-PLDRAGRVEVFLMVNDERGQNEDCFRV 1853          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig770.15874.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Nephroretinin1.420e-17390.634 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=... [more]
Uncharacterized2.700e-8046.40protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Uncharacterized2.050e-7857.67protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical1.210e-7042.41protein n=2 Tax=Triparma pacifica TaxID=91992 RepI... [more]
Hypothetical1.990e-6647.19protein n=1 Tax=Dictyocha speculum TaxID=35687 Rep... [more]
Uncharacterized1.690e-6147.16protein n=1 Tax=Saprolegnia diclina (strain VS20) ... [more]
Hypothetical4.690e-6141.28protein n=1 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized1.890e-6049.78protein n=2 Tax=Aphanomyces euteiches TaxID=100861... [more]
Uncharacterized2.590e-6047.16protein n=11 Tax=Aphanomyces astaci TaxID=112090 R... [more]
Hypothetical5.640e-6040.25protein n=1 Tax=Florenciella parvula TaxID=236787 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig770contigE_fasciculatus_S2_contig770:19202..21299 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score474.6
Seed ortholog evalue2.9e-131
Seed eggNOG ortholog2880.D8LAY6
Model size1517
KEGG koko:K02183
KEGG Pathwayko04014,ko04015,ko04016,ko04020,ko04022,ko04024,ko04070,ko04114,ko04218,ko04261,ko04270,ko04371,ko04626,ko04713,ko04720,ko04722,ko04728,ko04740,ko04744,ko04745,ko04750,ko04910,ko04912,ko04915,ko04916,ko04921,ko04922,ko04924,ko04925,ko04970,ko04971,ko05010,ko05031,ko05034,ko05133,ko05152,ko05167,ko05200,ko05214,ko05418,map04014,map04015,map04016,map04020,map04022,map04024,map04070,map04114,map04218,map04261,map04270,map04371,map04626,map04713,map04720,map04722,map04728,map04740,map04744,map04745,map04750,map04910,map04912,map04915,map04916,map04921,map04922,map04924,map04925,map04970,map04971,map05010,map05031,map05034,map05133,map05152,map05167,map05200,map05214,map05418
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005215,GO:0005432,GO:0005488,GO:0005509,GO:0006810,GO:0006811,GO:0006812,GO:0006814,GO:0006816,GO:0008150,GO:0008324,GO:0015075,GO:0015077,GO:0015081,GO:0015085,GO:0015291,GO:0015297,GO:0015298,GO:0015318,GO:0015368,GO:0015491,GO:0015672,GO:0022804,GO:0022857,GO:0022890,GO:0030001,GO:0034220,GO:0035725,GO:0042592,GO:0043167,GO:0043169,GO:0046872,GO:0046873,GO:0048878,GO:0050801,GO:0051179,GO:0051234,GO:0055065,GO:0055074,GO:0055080,GO:0055085,GO:0065007,GO:0065008,GO:0070588,GO:0070838,GO:0072507,GO:0072511,GO:0098655,GO:0098660,GO:0098662,GO:0098771,GO:0099516
Exons4
EggNOG free text desc.Ca2 -binding protein (EF-Hand superfamily
EggNOG OGsCOG5126@1,KOG0027@2759
Cds size738
COG Functional cat.DTZ
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01009,ko03036,ko04131,ko04147
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig770.15874.1prot_E_fasciculatus_S2_contig770.15874.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig770 19753..21071 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842433.1775038-UTR-E_fasciculatus_S2_contig770:19201..197521696842433.1775038-UTR-E_fasciculatus_S2_contig770:19201..19752Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig770 19202..19752 -
1696842433.2420468-UTR-E_fasciculatus_S2_contig770:21071..212991696842433.2420468-UTR-E_fasciculatus_S2_contig770:21071..21299Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig770 21072..21299 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842433.1904263-CDS-E_fasciculatus_S2_contig770:19752..198961696842433.1904263-CDS-E_fasciculatus_S2_contig770:19752..19896Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig770 19753..19896 -
1696842433.2017143-CDS-E_fasciculatus_S2_contig770:20132..204031696842433.2017143-CDS-E_fasciculatus_S2_contig770:20132..20403Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig770 20133..20403 -
1696842433.213084-CDS-E_fasciculatus_S2_contig770:20609..208361696842433.213084-CDS-E_fasciculatus_S2_contig770:20609..20836Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig770 20610..20836 -
1696842433.2239223-CDS-E_fasciculatus_S2_contig770:20975..210711696842433.2239223-CDS-E_fasciculatus_S2_contig770:20975..21071Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig770 20976..21071 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig770.15874.1

>prot_E_fasciculatus_S2_contig770.15874.1 ID=prot_E_fasciculatus_S2_contig770.15874.1|Name=mRNA_E_fasciculatus_S2_contig770.15874.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=246bp
MGGCAGGGVDVQEVLVKCRVGQFPSRKGFYLLVYDDHYQGSLYETWHVIV
QARLRMDVHSLLGQQSPADLIVRGDRYSRKVRAFSSCPAEVSFEPANAFQ
LVPGAYNRVELRFRPLSTGSRKIHVHLVDVDSMEIVGAWLATATAMPPVI
TKSYDVELPHGRACHKRIAYSNPWNSTRLFRLASSDPRILRPRYESLEVA
GGGTGFLRLWFAAPEGTNSRKEAFLFVNDSEGQNEECLLICMRGV*
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mRNA from alignment at E_fasciculatus_S2_contig770:19202..21299-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig770.15874.1 ID=mRNA_E_fasciculatus_S2_contig770.15874.1|Name=mRNA_E_fasciculatus_S2_contig770.15874.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2098bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig770:19202..21299- (Ectocarpus fasciculatus EfasUO2)
AGGTCCATTCAACTCCTCCCGGGTGGGGCCCCCGAGCACCATCTCTCCAA GCACGGCAAGGGATCCCTCGGCGTGGGGGGGGTCTCGCGAGATTCCTACG TTGTGTCCGAAGATGGAGGCGCGAAGTACATACACTGCGTGGAGGAGGCG GGTCACCAACAAGGGGGTGATGACAAGGACAGGGCTGGCGGTGGGGTGGT AATCGAGTGGGCTCGGCGGGCCGCTGCGATGGGAGGCTGCGCGGGGGGTG GTGTCGATGTCCAGGAGGTGCTCGTGAAGTGCAGGGTCGGGCAATTCCCT TCGCGGAAGGGCTTTTATTTACTTGTGAGTCGTTTTCAAGCTTTCTCTGA TTCCCTCATCGAGTACTCATTGCGCTGACAATCACCGATTAGACTAGACT TCACGGGGACTTGACTGTGTTGCTCAATGCACGAATGGTGTGCGCCGATG GCTCTCTTCGCAGGTGTACGACGACCACTACCAGGGGTCGCTGTATGAAA CGTGGCATGTCATCGTACAGGCAAGGCTGCGGATGGATGTGCATTCCCTG CTCGGACAGCAGAGCCCTGCCGATCTCATTGTACGCGGCGACCGTTACAG TCGAAAAGTCCGAGCATTCTCCTCTTGCCCAGCCGAGGTATCGTTCGAGC CGGCGAACGCCTTCCAACTCGTCCCTGGAGCATACAATCGGTGAGGTTTG AGATTTGAGAGTCTGGCCGAAGAAAACCGTCGTTGTGGACGGTGACTGGC AAAGGTGAGCGAGCGCCTCTGCGGCGCCTAAGTCTTAGCCGAACACCGAT TTAACACCTCCCGATTCGGTTGATGCGACATCTCCACGTTGAATCAAACC CTTCGAAGGGTACCCCCGTCGCCCCCGTCTCTGCGCCTTTCGTTAGGGTG GAGTTGCGCTTCCGTCCCCTCTCGACTGGCAGCCGAAAAATCCATGTCCA CCTCGTCGATGTGGACTCAATGGAGATAGTCGGTGCCTGGCTCGCGACGG CCACCGCGATGCCTCCTGTGATCACCAAGTCGTACGACGTTGAGCTTCCA CACGGACGTGCTTGCCACAAACGAATAGCCTACTCAAATCCTTGGAACTC CACAAGGCTTTTCCGGCTTGCTTCTTCGGACCCAAGGATTCTCCGGCCGC GCTACGAGAGCCTGGAGGCAAGATTTTTGGCGTGAAAAACAATATGGGGG GTAGCGAGAGGGACGCAAATGCGAGTTACATGTACTGTAGGTCGCACTTC GCCTGAAGACGTGGAAAAACTGCTAACTCGATGAGGGCCAAGATTTCGAC CGCGAATGCGCCCGGCGCGACCGTGGCTTTTGTTTTTGCTCTCCTCAACG AATGCTGTGTATTCCGCTGACATGCTACCCGGTTTCCACGCTGCAATGAC CAGGTGGCCGGCGGTGGAACAGGTTTCCTCCGCTTGTGGTTCGCTGCCCC AGAGGGCACCAACAGCAGAAAAGAGGCTTTCCTGTTCGTAAACGATAGCG AGGGACAAAACGAGGAGTGTCTCCTGATCTGTATGCGAGGGGTATGACGT GAAAAACCTTCCACGTAGTTTTTACCATCGCCTTGGGGTACTACCGTGAA ACTGTAGCTGCAGTACAAGTGTGCAACGGTGGTCACTAGTTTGTGATTGG CAGCGTAGGCAATGCCATCTATGAATGACCTGGTGGGGGTGGATCGAATT CGCAGTTGCCTCCGACATTTGATTTGTATCATGGCACTGGCCTTCTCGGA GTTCACGCTCCGAGCGTGTGAAGAAAATGCATTCCGACAGAGGGTGAGTT TTATCTCTGTACTACTGAGGTTGTGTGGTGGTCTTTGGCTGTAATAGTTT GAAGTCCCGGCTGTGCGAGGGTGAGTTCCGGCGGAATATATACTTCCACG ACGAAGCATGGCAACTTCATGGTTTGGCTTTCTTTCGTGGATTTTTCACA GGACCTTCACGGACGGAAGTGGATTCAGCTCTCACGCCGGAAGTCAAATA TGGTTGTCCGTGTCTGGGAAGATCACCGCGGAGCTCAGCACGTACCTACC AAAAAGGCAGCCTACCATGGTACTAAGTTTATGTGCATTCGATCGTCT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig770:19202..21299-

>mRNA_E_fasciculatus_S2_contig770.15874.1 ID=mRNA_E_fasciculatus_S2_contig770.15874.1|Name=mRNA_E_fasciculatus_S2_contig770.15874.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=738bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig770:19202..21299- (Ectocarpus fasciculatus EfasUO2)
ATGGGAGGCTGCGCGGGGGGTGGTGTCGATGTCCAGGAGGTGCTCGTGAA
GTGCAGGGTCGGGCAATTCCCTTCGCGGAAGGGCTTTTATTTACTTGTGT
ACGACGACCACTACCAGGGGTCGCTGTATGAAACGTGGCATGTCATCGTA
CAGGCAAGGCTGCGGATGGATGTGCATTCCCTGCTCGGACAGCAGAGCCC
TGCCGATCTCATTGTACGCGGCGACCGTTACAGTCGAAAAGTCCGAGCAT
TCTCCTCTTGCCCAGCCGAGGTATCGTTCGAGCCGGCGAACGCCTTCCAA
CTCGTCCCTGGAGCATACAATCGGGTGGAGTTGCGCTTCCGTCCCCTCTC
GACTGGCAGCCGAAAAATCCATGTCCACCTCGTCGATGTGGACTCAATGG
AGATAGTCGGTGCCTGGCTCGCGACGGCCACCGCGATGCCTCCTGTGATC
ACCAAGTCGTACGACGTTGAGCTTCCACACGGACGTGCTTGCCACAAACG
AATAGCCTACTCAAATCCTTGGAACTCCACAAGGCTTTTCCGGCTTGCTT
CTTCGGACCCAAGGATTCTCCGGCCGCGCTACGAGAGCCTGGAGGTGGCC
GGCGGTGGAACAGGTTTCCTCCGCTTGTGGTTCGCTGCCCCAGAGGGCAC
CAACAGCAGAAAAGAGGCTTTCCTGTTCGTAAACGATAGCGAGGGACAAA
ACGAGGAGTGTCTCCTGATCTGTATGCGAGGGGTATGA
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