prot_E_fasciculatus_S2_contig7688.15856.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7688.15856.1
Unique Nameprot_E_fasciculatus_S2_contig7688.15856.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length166
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: D8LRP2_ECTSI (Structural maintenance of chromosomes protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRP2_ECTSI)

HSP 1 Score: 320 bits (819), Expect = 4.610e-99
Identity = 162/165 (98.18%), Postives = 164/165 (99.39%), Query Frame = 0
Query:    1 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKK 165
            IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVG AQFIPLD+IKVKPI+ESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKK
Sbjct:  488 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGRAQFIPLDTIKVKPISESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKK 652          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A7S2RI11_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RI11_9STRA)

HSP 1 Score: 188 bits (478), Expect = 2.190e-52
Identity = 93/162 (57.41%), Postives = 124/162 (76.54%), Query Frame = 0
Query:    5 LRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            L  +  QL +A+ ++RM K +E+MADCL TLKR++PGV GRLVDLC+PTQRK++ AV  AAG+ M++IVVDT++   +C+ YM+ +++G A F+PLDSI  KPI E LRSLGP  RLCAD++Q  D  VR A+L+AVGNT++ DTLDAARD+CF   E  KA
Sbjct:  250 LSEVRNQLSEARYNKRMNKHEERMADCLATLKRLFPGVHGRLVDLCRPTQRKYHRAVVVAAGKAMDSIVVDTQSTGYDCIRYMREHQIGIASFVPLDSIVTKPIQERLRSLGPRSRLCADVIQC-DPEVRPAVLYAVGNTVLCDTLDAARDICFRQREKVKA 410          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A0W8DAE7_PHYNI (Structural maintenance of chromosomes protein n=21 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DAE7_PHYNI)

HSP 1 Score: 174 bits (442), Expect = 1.860e-47
Identity = 86/162 (53.09%), Postives = 119/162 (73.46%), Query Frame = 0
Query:    5 LRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            L  +N +LRD KDD+R ++ + K AD LETLKR+YPGVRGRLVDLCKPTQR++N+AVT A G++M+AIVV       EC+ Y++ ++ G+AQFIPLD I+VKPINE  R LG + ++  D+++  D  +  A+ +AVG+T+V D++D ARDLCF   E  KA
Sbjct:  454 LERVNNKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPTQRRYNMAVTVATGKHMDAIVVTDYRTGQECIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVVEC-DAEIEPALHYAVGDTVVCDSIDVARDLCFRQNEKVKA 614          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: K3WJ16_GLOUD (Structural maintenance of chromosomes protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WJ16_GLOUD)

HSP 1 Score: 174 bits (442), Expect = 1.860e-47
Identity = 83/166 (50.00%), Postives = 123/166 (74.10%), Query Frame = 0
Query:    1 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            + E L  +N +LRD KDD+R ++ + K  + +ETLKR++PGVRGRLVDLCKP QRK+N+AVT A G++M+AIVV       +C+ Y++ +++G+AQFIPLD I++KPINE  R+LGP+ +L  D+++  D  +  A+L+AVG+T+V +++D ARDLCF   E  KA
Sbjct:  465 LKEQLDRVNNKLRDLKDDKRQSQAESKKVETIETLKRLFPGVRGRLVDLCKPVQRKYNMAVTVATGKHMDAIVVADYKTGQDCIQYLRESRLGSAQFIPLDKIRIKPINERFRNLGPNIKLVVDVIEC-DQEIEPALLYAVGDTVVCESIDVARDLCFRQNEKVKA 629          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A8K1C357_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C357_PYTOL)

HSP 1 Score: 174 bits (442), Expect = 1.860e-47
Identity = 83/166 (50.00%), Postives = 123/166 (74.10%), Query Frame = 0
Query:    1 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            I E L  +N +LRD +DDRR ++ + K A+ +ETLKR++PGVRGRLVDLCKP QRK+N+A+T A G++M+AIVV+      +C+ Y++ ++ G+AQFIPLD I++KPINE  R+LG + +L  D+++   D +  A+++AVG+T+V D++D ARDLCF   E  KA
Sbjct:  480 IQEELERVNTKLRDLRDDRRQSQVESKKAETIETLKRLFPGVRGRLVDLCKPVQRKYNMAITVATGKHMDAIVVNDYKTGQDCIQYLRDSRSGSAQFIPLDKIRIKPINERFRNLGNNIKLVIDVIECDQD-IEPAVMYAVGDTVVCDSIDVARDLCFRQNEKVKA 644          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A3F2S1N6_9STRA (SMC hinge domain-containing protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2S1N6_9STRA)

HSP 1 Score: 173 bits (438), Expect = 6.380e-47
Identity = 85/166 (51.20%), Postives = 121/166 (72.89%), Query Frame = 0
Query:    1 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            + E L+ +N +LRD KDDRR ++ + +  + LETLKR+YPGVRGRLVDLCKP QRK+N+AVT A GR+M+AIVV       +C+ Y++ +++G+AQFIPLD I+VKPINE  R LG + ++  D+++  D  +  A+ +AVG+T+V D++D ARDLCF   E  KA
Sbjct:  499 LSEQLKRVNNKLRDLKDDRRQSQAEARKTETLETLKRLYPGVRGRLVDLCKPIQRKYNLAVTVATGRHMDAIVVTDYRTGQDCIKYLRDSRLGSAQFIPLDKIRVKPINERFRDLGSNIKMVIDVIEC-DAEIEPALQYAVGDTVVCDSIDLARDLCFRRNEKVKA 663          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A0P1A6V7_PLAHL (Structural maintenance of chromosomes protein n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1A6V7_PLAHL)

HSP 1 Score: 170 bits (431), Expect = 5.620e-46
Identity = 84/162 (51.85%), Postives = 119/162 (73.46%), Query Frame = 0
Query:    5 LRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            L  ++ +LRD KDD+R ++ + K AD LETLKR+YPGVRGRLVDLCKP QRK+N+AVT A G++M+AIVV       +C+ Y++ ++ G+AQFIPLD I+VKPINE  RSLG + ++  D+++  D  +  A+ +AVG+T++ D++D ARDLCF   E  KA
Sbjct:  494 LEIVSYKLRDLKDDKRQSQAEAKRADTLETLKRLYPGVRGRLVDLCKPIQRKYNMAVTVATGKHMDAIVVTDYRTGQDCIQYLRESRAGSAQFIPLDKIRVKPINERFRSLGNNIKMVIDVIKC-DSEIEPALHYAVGDTVICDSIDVARDLCFRQNEKVKA 654          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A6A3J9J0_9STRA (Structural maintenance of chromosomes protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3J9J0_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.430e-45
Identity = 83/166 (50.00%), Postives = 120/166 (72.29%), Query Frame = 0
Query:    1 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            + + L  +N +LRD KDD+R ++ + + A+ LETLKR+YPGVRGRLVDLCKP QRK+N+AVT A G++M+AIVV       +C+ Y++ ++ G+AQFIPLD I+VKPINE  R LG + ++  D+++  D  +  A+ +AVG+T+V D++D ARDLCF   E  KA
Sbjct:  496 LSQQLDRVNNKLRDLKDDKRQSQAEARKAETLETLKRLYPGVRGRLVDLCKPIQRKYNMAVTVATGKHMDAIVVTDYRTGQDCIQYLRDSRAGSAQFIPLDKIRVKPINERFRGLGNNIKMVVDVIEC-DAEIEPALHYAVGDTVVCDSIDIARDLCFRQNEKVKA 660          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A5D6YAM5_9STRA (Structural maintenance of chromosomes protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YAM5_9STRA)

HSP 1 Score: 168 bits (426), Expect = 2.640e-45
Identity = 80/166 (48.19%), Postives = 123/166 (74.10%), Query Frame = 0
Query:    1 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            + + L+ +N +LRD KDD+R ++ + + A+ +E L+R++PGVRGRLVDLCKP QRK+N+AVT A G++M+AIVV       +C+ Y++ +++G+AQFIPLD I++KPINE  R+LG + +L  D+++  D  +  A+L+AVG+T+V D++D ARDLCF   E  KA
Sbjct:  476 LKDQLQRVNTKLRDLKDDKRQSQAESRKAETIEALRRLFPGVRGRLVDLCKPVQRKYNMAVTVATGKHMDAIVVADYKTGQDCIQYLRESRLGSAQFIPLDKIRIKPINERFRTLGDNIKLVVDVIEC-DAEIEPALLYAVGDTVVCDSIDVARDLCFRQHEKVKA 640          
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Match: A0A662WZB6_9STRA (Structural maintenance of chromosomes protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WZB6_9STRA)

HSP 1 Score: 167 bits (424), Expect = 4.900e-45
Identity = 83/166 (50.00%), Postives = 120/166 (72.29%), Query Frame = 0
Query:    1 IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLCKPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPLDSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTLDAARDLCFGSGEDKKA 166
            + E L  ++ +LRD KDD+R ++ + +  + LETLKR+ PGVRGRLVDLCKP QRK+N+AVT A G++M+AIVV       EC+ Y++ ++ G+AQFIPLD I+VKPINE  R+LG + ++  D+++  D  +  A+L+AVG+T+V D++D ARDLCF   E  KA
Sbjct:  425 LSEQLDRVSNKLRDLKDDKRQSQAETRRTETLETLKRLCPGVRGRLVDLCKPIQRKYNMAVTVATGKHMDAIVVTDYKTGQECIQYLRDSRSGSAQFIPLDKIRVKPINERFRNLGNNIKMVVDVIEC-DTEIEPALLYAVGDTVVCDSIDVARDLCFRQNEKVKA 589          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7688.15856.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LRP2_ECTSI4.610e-9998.18Structural maintenance of chromosomes protein n=1 ... [more]
A0A7S2RI11_9STRA2.190e-5257.41Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A0W8DAE7_PHYNI1.860e-4753.09Structural maintenance of chromosomes protein n=21... [more]
K3WJ16_GLOUD1.860e-4750.00Structural maintenance of chromosomes protein n=1 ... [more]
A0A8K1C357_PYTOL1.860e-4750.00Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2S1N6_9STRA6.380e-4751.20SMC hinge domain-containing protein n=4 Tax=Phytop... [more]
A0A0P1A6V7_PLAHL5.620e-4651.85Structural maintenance of chromosomes protein n=1 ... [more]
A0A6A3J9J0_9STRA1.430e-4550.00Structural maintenance of chromosomes protein n=6 ... [more]
A0A5D6YAM5_9STRA2.640e-4548.19Structural maintenance of chromosomes protein n=1 ... [more]
A0A662WZB6_9STRA4.900e-4550.00Structural maintenance of chromosomes protein n=2 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 5..25
NoneNo IPR availableGENE3D1.20.1060.20coord: 20..100
e-value: 1.8E-24
score: 88.0
NoneNo IPR availableGENE3D3.30.70.1620coord: 101..161
e-value: 1.8E-24
score: 88.0
NoneNo IPR availablePANTHERPTHR18937STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBERcoord: 2..163
IPR010935SMCs flexible hingeSMARTSM00968SMC_hinge_2coord: 40..157
e-value: 9.3E-24
score: 94.9
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 40..156
e-value: 7.7E-23
score: 81.0
IPR036277SMCs flexible hinge superfamilySUPERFAMILY75553Smc hinge domaincoord: 3..161

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7688contigE_fasciculatus_S2_contig7688:1736..4047 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7688.15856.1mRNA_E_fasciculatus_S2_contig7688.15856.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7688 1736..4048 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7688.15856.1 ID=prot_E_fasciculatus_S2_contig7688.15856.1|Name=mRNA_E_fasciculatus_S2_contig7688.15856.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=166bp
IDEALRSINEQLRDAKDDRRMTKQQEKMADCLETLKRIYPGVRGRLVDLC
KPTQRKFNVAVTTAAGRYMEAIVVDTKAECLECLSYMQTNKVGTAQFIPL
DSIKVKPINESLRSLGPSHRLCADIMQGGDDGVRKAILFAVGNTIVSDTL
DAARDLCFGSGEDKKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036277SMC_hinge_sf
IPR010935SMC_hinge