mRNA_E_fasciculatus_S2_contig759.15752.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIPF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRQ4_ECTSI) HSP 1 Score: 279 bits (713), Expect = 3.870e-92 Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1
Query: 1 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLG VAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY
Sbjct: 211 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 345
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIPF n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG11_9PHAE) HSP 1 Score: 279 bits (713), Expect = 4.120e-92 Identity = 134/135 (99.26%), Postives = 134/135 (99.26%), Query Frame = 1
Query: 1 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLG VAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY
Sbjct: 213 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGFVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 347
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIPF n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6H4_9STRA) HSP 1 Score: 194 bits (493), Expect = 2.170e-60 Identity = 89/135 (65.93%), Postives = 110/135 (81.48%), Query Frame = 1
Query: 1 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
D+TDLAGPLVF L FG CLLL GK HFGYIYGFG FGC A ++VLNL+G++PID W+TTSVLGYCLLPV+ L+A+GI DL G +G L AVAW +AT+LFE+YL+MR QR+L+AYP+GLLY CFVL+ ++
Sbjct: 91 DETDLAGPLVFALVFGTCLLLAGKLHFGYIYGFGAFGCGALSLVLNLMGDRPIDAWRTTSVLGYCLLPVVLLSAVGIALDLSGRVGLALAGAAVAWSCTAATKLFEQYLDMRHQRWLIAYPIGLLYCCFVLMAIF 225
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA) HSP 1 Score: 175 bits (443), Expect = 2.030e-53 Identity = 78/134 (58.21%), Postives = 102/134 (76.12%), Query Frame = 1
Query: 4 DTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
D D+AGPL FCL G CLLLTGK HFGYIYGFG+ GC+ ++LNL+ ++ ID+++T S+LGYCLLP++ LAA IV +L+G +G V + WCT++ATR E L+MR QRYLVAYP+ LLY+CF LITV+
Sbjct: 46 DADMAGPLFFCLLLGFCLLLTGKVHFGYIYGFGLIGCLGMYIILNLMSDRSIDIYRTASILGYCLLPIVSLAAASIVFNLKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIPF n=3 Tax=Monodopsidaceae TaxID=425072 RepID=W7U1N9_9STRA) HSP 1 Score: 174 bits (442), Expect = 2.770e-52 Identity = 84/135 (62.22%), Postives = 103/135 (76.30%), Query Frame = 1
Query: 1 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
DD DLAGPL F L FG+ LL+TGK HFGYIYGFG+ GCIA +VLNL+ K ID+W+ S+LGY LLPVIGLA +GI L+G +G L + +AW T ++TRLFE+ L M +QRYLVAYPV L+YA FVLITV+
Sbjct: 120 DDADLAGPLFFLLSFGIFLLMTGKVHFGYIYGFGVSGCIAMYLVLNLLSPKDIDVWRVCSILGYGLLPVIGLAFLGIAVSLKGGVGQGLATLTIAWSTYASTRLFEKALNMSQQRYLVAYPVALVYAIFVLITVF 254
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIPF n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TR42_9EUKA) HSP 1 Score: 166 bits (419), Expect = 1.040e-49 Identity = 80/136 (58.82%), Postives = 99/136 (72.79%), Query Frame = 1
Query: 4 DTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGE--KPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
D D+AGPLVFCL G CL+L K HFGYIYGFG+ GC+ +LNL+ + K ID+++T S+LGYCLLP++GLAA+ V L+G LG L V WCTI+ATR E L MR QRYLVAYP+ LLY+CF LITV+
Sbjct: 49 DADMAGPLVFCLLLGFCLMLRLKMHFGYIYGFGLIGCLGMYTILNLMSDPDKSIDIFRTISILGYCLLPIVGLAALSTVLSLKGYLGFGLTAFTVLWCTIAATRFVEATLGMRDQRYLVAYPLMLLYSCFALITVF 184
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Yip1 (domain-containing protein n=1 Tax=Stereum hirsutum (strain FP-91666) TaxID=721885 RepID=UPI000444A1BD) HSP 1 Score: 165 bits (417), Expect = 1.060e-49 Identity = 76/135 (56.30%), Postives = 99/135 (73.33%), Query Frame = 1
Query: 1 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
DD DLAGPL+FC CFG LL +GKP FGYIYG G+ G + +LNL+ EK ID ++ +SVLGYCLLP++G+ A+ ++ L G LG+VL LV+V WCT +A+ +F L M QR LVAYPVGLLY CF L++V+
Sbjct: 16 DDADLAGPLLFCFCFGTFLLFSGKPQFGYIYGVGLLGSASIYTLLNLMSEKGIDAYRVSSVLGYCLLPMVGVGALSVLVTLDGLLGYVLALVSVTWCTYAASGIFVAVLRMSDQRLLVAYPVGLLYGCFALLSVF 150
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIP (Fragment) n=1 Tax=Heterobasidion irregulare (strain TC 32-1) TaxID=747525 RepID=W4K4H1_HETIT) HSP 1 Score: 166 bits (421), Expect = 4.380e-49 Identity = 73/135 (54.07%), Postives = 101/135 (74.81%), Query Frame = 1
Query: 1 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
DD DLAGPL+FC CFG+ LL +GKP FGYIYG G+ G ++ ++LNL+ EK ID ++ SVLGYCLLP++G+ A+ ++ L G +G+ L LV++AWCT +A+ +F L M QR LVAYPVGLLY CF +++V+
Sbjct: 120 DDADLAGPLLFCFCFGISLLFSGKPQFGYIYGVGLLGSMSVYLLLNLMSEKAIDAYRVASVLGYCLLPMVGVGALSVLVTLDGLVGYALSLVSIAWCTYAASGIFVTVLRMTDQRLLVAYPVGLLYGCFAMLSVF 254
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Protein (YIP n=2 Tax=Gigaspora TaxID=4873 RepID=A0A8H3X8E3_GIGMA) HSP 1 Score: 166 bits (420), Expect = 4.940e-49 Identity = 76/134 (56.72%), Postives = 99/134 (73.88%), Query Frame = 1
Query: 4 DTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
DTDLAGPL+FCL FG+CLLLTGK HFGYIYG + GC + M+LNL+ E ID ++T SVLGYCLLP++ L+ +G+V L G +G +AV WCT S++ +F L+M QR LVAYPVG+LY CF L+T++
Sbjct: 115 DTDLAGPLLFCLIFGVCLLLTGKIHFGYIYGVALLGCFSIYMILNLMSESGIDGYRTASVLGYCLLPMVLLSCVGVVVPLSGPIGLFASALAVGWCTYSSSTMFVTVLQMSEQRILVAYPVGMLYVCFALMTIF 248
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Match: Yip1-domain-containing (protein n=1 Tax=Punctularia strigosozonata (strain HHB-11173) TaxID=741275 RepID=UPI000441865B) HSP 1 Score: 164 bits (415), Expect = 7.090e-49 Identity = 74/135 (54.81%), Postives = 101/135 (74.81%), Query Frame = 1
Query: 1 DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEKPIDLWKTTSVLGYCLLPVIGLAAMGIVTDLRGNLGHVLGLVAVAWCTISATRLFEEYLEMRRQRYLVAYPVGLLYACFVLITVY 405
DD DLAGPL+F LCFG+ LLL+GKP FGYIYG G+ G ++ M+LNL+ E ID ++ SVLGYCLLP++G+ A+ ++ L G LG +L ++++AWCT +A+ +F L M QR LVAYPVGLLY CF L++V+
Sbjct: 61 DDADLAGPLLFILCFGMFLLLSGKPQFGYIYGVGLLGSMSVYMLLNLMSETGIDAYRVVSVLGYCLLPMVGVGAVSVMVTLDGLLGSILSIISIAWCTYAASGIFVAVLRMSDQRLLVAYPVGLLYGCFALLSVF 195 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig759.15752.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig759.15752.1 >prot_E_fasciculatus_S2_contig759.15752.1 ID=prot_E_fasciculatus_S2_contig759.15752.1|Name=mRNA_E_fasciculatus_S2_contig759.15752.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=136bp DDTDLAGPLVFCLCFGLCLLLTGKPHFGYIYGFGMFGCIATAMVLNLIGEback to top mRNA from alignment at E_fasciculatus_S2_contig759:26070..27699- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig759.15752.1 ID=mRNA_E_fasciculatus_S2_contig759.15752.1|Name=mRNA_E_fasciculatus_S2_contig759.15752.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1630bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig759:26070..27699- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig759:26070..27699- >mRNA_E_fasciculatus_S2_contig759.15752.1 ID=mRNA_E_fasciculatus_S2_contig759.15752.1|Name=mRNA_E_fasciculatus_S2_contig759.15752.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=408bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig759:26070..27699- (Ectocarpus fasciculatus EfasUO2)back to top |