mRNA_E_fasciculatus_S2_contig755.15712.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig755.15712.1
Unique NamemRNA_E_fasciculatus_S2_contig755.15712.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Cation (efflux protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7A9_ECTSI)

HSP 1 Score: 784 bits (2025), Expect = 3.150e-280
Identity = 436/462 (94.37%), Postives = 441/462 (95.45%), Query Frame = 1
Query:  355 PLFHGSHGHDDHNHGPAQDGLVNINHSAAGPA---ASLAVGDTVSPSHGGHSXXXXXXXXXXXXXXXVDMATLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDLATSSQQTNIESTEAAREVDAITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIEQ 1713
            PLFHG HGHDDHNHGPAQDGL+NINHSAAG A   +SLAVGDT S SHGGHSXXXXXXXXXXXXXXXVDMATLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDLATSSQQ NIES EAAREVDAITW GALVNVGLA FKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIA+MLMGAGYGIGNHSFETLREVI+ G HAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSM GAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK      QVPGV+SFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE KPCPAMSSLRPQEDIEQ
Sbjct:   58 PLFHGGHGHDDHNHGPAQDGLLNINHSAAGGAGRASSLAVGDTFSSSHGGHSXXXXXXXXXXXXXXXVDMATLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDLATSSQQANIESAEAAREVDAITWAGALVNVGLAAFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIALMLMGAGYGIGNHSFETLREVISRGEHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMSGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRKVAEIATQVPGVLSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVEPKPCPAMSSLRPQEDIEQ 519          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DFL3_HETAK)

HSP 1 Score: 379 bits (972), Expect = 4.050e-122
Identity = 208/407 (51.11%), Postives = 282/407 (69.29%), Query Frame = 1
Query:  559 TLKKRPTLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDLATSSQQTNIESTEAAREVDAITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVI--------------NGGAHAAI--PTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIEQ 1713
            +L  + T+ RL LA+MC +++PL RR SR+E A +  VS+FL AV+  K  +S++ +Q   +   W+ H  L     Q   E     +E D +TW+G  VN+GL+ FKL AGI G SSAM+ADAGHSLSDL+SD VTL++VRL+RLPPDEDHPYGHGRFEAVGAFIIA+ML+ A YG+GNHS+E+  + I              +GG   +   PT++  VAA +SI++KE L+R T  +G+R NSQVLIANAWHHR+DA+SSV+A + I G+M G P+LD +AGLMVAGM++LTG+Q+  +++ QLTD A+ D   +      +V GV+ FD +RARRMG Q LVD+ IQ D  ISA+AA QI +R RW +L  +P V+DV+V ++ E KPCP +SSL  QE I++
Sbjct:   27 SLSSKRTIARLVLAAMCSISLPLMRRQSRVEVAVVCIVSLFLGAVECGKLMLSQVALQFSGVRRAWEEHQQLEDRMPQRLKEDANV-KEADRVTWLGVWVNIGLSVFKLVAGIAGRSSAMVADAGHSLSDLISDGVTLYSVRLARLPPDEDHPYGHGRFEAVGAFIIAMMLIAASYGLGNHSYESFLKAIGYMKIPALGIGGNLDGGVPTSELQPTKIALVAAVISIVSKELLYRVTAKVGERLNSQVLIANAWHHRSDALSSVIAFVGIGGAMMGVPVLDSLAGLMVAGMLSLTGLQLGWESVKQLTDTAENDCIDEIGAAVGKVEGVLGFDNLRARRMGSQMLVDVRIQCDPYISATAAHQIAERTRWHVLKIVPQVSDVLVTVSGEQKPCPVVSSLPTQEKIQE 432          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RMB7_9STRA)

HSP 1 Score: 345 bits (886), Expect = 4.530e-108
Identity = 201/394 (51.02%), Postives = 256/394 (64.97%), Query Frame = 1
Query:  577 TLIRLFLASMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDLATSSQQTNIESTEAA---REVDAITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHA-----AIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDR--VRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIE 1710
            TL+R    +  +L +P   R SRL+ A    V  FL AV   K  + K+R ++  LYS + AH   +T    T +ES EAA   +  + ITW G  VN+ LAGFKL AG+ G S+AMIADAGHSLSDLLSD VTLWAVRLSRLPPD DHPYGHGRFEA+GA  IA +L    +G G H++ +L E     A       + PT L   AA VSI++KE L+RAT  +G+R NSQVLIANAWHHR+DA SSVVAL+ I G++ G P+LDP+AGL VAGMVA+TG+QV  D++ QLTD  D +  ++         GVVS D+  VRARRMG   LVDL +Q    + AS A QI + VRW IL  +P V++V+V++  + + CP M+ LRP E IE
Sbjct:   84 TLVRSAAVTSILLLLP--PRHSRLKMALSIAVGCFLVAVGSGKSLVLKVRWRLSSLYSSFLAH-QTSTGPSATFVESPEAAMSRKAANRITWAGVFVNLALAGFKLAAGVFGQSAAMIADAGHSLSDLLSDGVTLWAVRLSRLPPDSDHPYGHGRFEALGALAIAALLASTAFGFGGHAYHSLTEFSRASAAGMDLATSTPTLLAVAAAVVSILSKEVLYRATAVVGQRLNSQVLIANAWHHRSDAFSSVVALVGIVGALLGQPILDPLAGLCVAGMVAITGLQVGWDSLTQLTDTVDDEAVKRASEIAMNCDGVVSVDQKNVRARRMGSDILVDLRVQISPHVPASGANQIAEAVRWRILESMPAVSEVLVHVVSQPQSCPMMAQLRPAEAIE 474          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RL19_9STRA)

HSP 1 Score: 317 bits (811), Expect = 6.300e-99
Identity = 171/305 (56.07%), Postives = 212/305 (69.51%), Query Frame = 1
Query:  835 ITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHA-----AIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDR--VRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIE 1710
            ITW G  VN+ LAGFKL AG+ G S+AMIADAGHSLSDLLSD VTLWAVRLSRLPPD DHPYGHGRFEA+GA  IA +L    +G G H++ +L E     A       + PT L   AA VSI++KE L+RAT  +G+R NSQVLIANAWHHR+DA SSVVAL+ I G++ G P+LDP+AGL VAGMVA+TG+QV  D++ QLTD  D +  ++         GVVS D+  VRARRMG   LVDL +Q    + AS A QI + VRW IL  +P V++V+V++  + + CP M+ LRP E IE
Sbjct:    9 ITWAGVFVNLALAGFKLAAGVFGQSAAMIADAGHSLSDLLSDGVTLWAVRLSRLPPDSDHPYGHGRFEALGALAIAALLASTAFGFGGHAYHSLTEFSRASAAGMDLATSTPTLLAVAAAVVSILSKEVLYRATAVVGQRLNSQVLIANAWHHRSDAFSSVVALVGIVGALLGQPILDPLAGLCVAGMVAITGLQVGWDSLTQLTDTVDDEAVKRASEIAMNCDGVVSVDQKNVRARRMGSDILVDLRVQISPHVPASGANQIAEAVRWRILESMPAVSEVLVHVVSQPQSCPMMAQLRPAEAIE 313          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V756_9STRA)

HSP 1 Score: 301 bits (771), Expect = 5.260e-93
Identity = 172/354 (48.59%), Postives = 223/354 (62.99%), Query Frame = 1
Query:  802 ESTEAAREVDAITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVIN----------------------GGAHAAI----------------------PTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRK------QVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE-TKPCPAMSSLRPQEDIE 1710
            E ++A +E D +TW+G   N+ LA FKLFAGI+G SSAMIADAGHSLSDL+SD VTLWAVR++RLP D DHPYGHGRFEAVGAF+I+VMLM AGY +GNH++E+    +                       G A A++                      P ++  VAA VSI++KE L+R T  +GK+ NSQVLIANAWHHR+DA+SS VA+  I G+  G P+LDP+AGLMV+ M+ LTG+Q   D++  LTD AD  +  K      QV GV    ++RAR MG  TLVD+ I T   ISASAA Q+ +R RW +L  +P V+DV+V +     K CP  ++LRP  +IE
Sbjct:    1 EVSDAGKESDRVTWLGVWCNIFLAAFKLFAGIVGRSSAMIADAGHSLSDLVSDGVTLWAVRVARLPADADHPYGHGRFEAVGAFVISVMLMSAGYSLGNHAYESFLRALPYSGIPTSLAGWKVGLLSMMGHMGAASASVTGSAXXXXXXXXXXXVEGFAGMPGKIALVAALVSIVSKELLYRVTARVGKKLNSQVLIANAWHHRSDALSSFVAVGGIVGATMGLPVLDPLAGLMVSAMLTLTGLQCGWDSVKALTDTADTAMVSKLGALLDQVEGVQGHSQLRARSMGSDTLVDVKIHTHPRISASAAHQVAERARWHLLRNVPMVSDVLVTLDTSGDKICPVTATLRPHSEIE 354          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Cation (efflux protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U980_9STRA)

HSP 1 Score: 295 bits (755), Expect = 1.150e-87
Identity = 176/437 (40.27%), Postives = 252/437 (57.67%), Query Frame = 1
Query:  565 KKRPTLIRLFLASMCVLAVPLW---RRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYSGWKAHSDLATSSQQTNIES--------TEAAREVDAITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLR-----------------------------EVINGGAHAAI---------PTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYD----VRR--KQVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQEDIE 1710
            +K+ T+  + L ++ V+AV  +   RR S  +   LG ++ F+ AV+ +K  ++ LR  + Q+ + W+AH  L     +  + +           A E D +TW+G   N+GL   K  AG+LG S+AM+ADAGH+LSDL+SD VTLWAVR+S LPPD+DHPYGHGRFEAVG+  ++ +L+   + I  H+++ L+                              ++  G H A          P+ L  VAA+ SI+ KE L++ T ++G + NSQV++ANAWHHR+DA+SS++AL  I  +  G   LDPIAG++V  M+ LTG+Q+  D+M QLTD  + D    +RR    V GV     VRARRMGPQ LVDL I  D  ISASAAQQ+  +VRW +  + P V++V+V+   E  PCP    LR   DIE
Sbjct:  176 QKKQTIAGVLLGAVAVVAVRSYQGVRRFSGADVGMLGLIATFVLAVESTKSYLNTLRENIAQIAAAWRAHRSLRLLHSERPLATGGPAVSQLAAGAAESDRVTWLGIYANLGLFAIKATAGVLGRSAAMVADAGHTLSDLVSDMVTLWAVRMSALPPDDDHPYGHGRFEAVGSLGVSALLLLTAWHIAAHAYDKLQCTLALPSLGPLPFSSFSLSALRSSVPWMQGLLARGGHMAASVGASCEAAPSALAVVAATASIVVKELLYQITASVGIKHNSQVVLANAWHHRSDAISSIMALGGIVAARAGLAALDPIAGILVTAMIGLTGMQIFLDSMNQLTDTVESDAIPGIRRVAASVEGVRDTSDVRARRMGPQLLVDLRILVDSQISASAAQQVADQVRWRVRRDFPNVSEVLVHTVTEPLPCPLAMELRQPSDIE 612          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Hypothetical (protein n=1 Tax=Calcidiscus leptoporus TaxID=127549 RepID=A0A7S0IUC4_9EUKA)

HSP 1 Score: 269 bits (688), Expect = 1.110e-79
Identity = 149/312 (47.76%), Postives = 216/312 (69.23%), Query Frame = 1
Query:  775 ATSSQQTNIESTEAAREVDAITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRR------KQVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNI--AVETKPCPAMSS 1686
            A S ++ +  S +AAR    ITW+GA VN+ LA FK+FAG++GHS+AM++DAGHS SDL+SDA+TL  + +S+LPPD+DHPYGHGRFE++G+  IA +L+ AG   G +++  +          A   ++  VAA  SI++KE LFRAT  IG++ +S +LIANAWHHR+DA+SSVVAL  + G+M G P+LDP+AGL+VAGMV   GV++  +A+ QL+D +D    +      ++VPGV    +VRAR MG   LVDL IQ +  +SASAA ++ + VRWE+L ++P V++V+V++  AV    CP  ++
Sbjct:  134 AASQEKASYASGDAAR----ITWLGAAVNLALAIFKVFAGVVGHSAAMMSDAGHSFSDLISDALTLITLNMSQLPPDDDHPYGHGRFESLGSLAIAGLLLLAGCSFGANAYSEIMHP-----SPAPLGKIALVAALASIVSKEFLFRATERIGEQISSPMLIANAWHHRSDALSSVVALAGVGGAMLGVPILDPLAGLVVAGMVTTMGVRIGIEAVMQLSDTSDLVATQSVHSIAREVPGVQRAWQVRARSMGGSYLVDLAIQVESRLSASAAHKVAEEVRWEVLNKVPRVSEVLVHVDTAVHDVDCPLQTA 436          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Cation (transporter n=5 Tax=root TaxID=1 RepID=A0A3D5HED6_9DELT)

HSP 1 Score: 261 bits (666), Expect = 3.750e-78
Identity = 138/282 (48.94%), Postives = 193/282 (68.44%), Query Frame = 1
Query:  835 ITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTD-AADYDVRRKQ------VPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVE 1659
            +TW+G   N+ LA  K F GI+ +SSA+IADAGHS+SDLLSD +TLWAVR+S +P D++HPYGHG+FE VG FIIA++L+  G G+  H F  +   +       +P  +    A ++II KEALF  T  +G+R  S+VL+ANAWHHR+DA+SSV ALL IAG+  G P++DPIAG++VAG++  TG+ +  +++ +LTD   + DV  +       + GV  +  +RARRMGP  LVDL IQ D M+S SAA Q+ +RVR EIL +LP V +V+V++  E
Sbjct:   14 VTWLGLAANLILALAKGFIGIIANSSALIADAGHSVSDLLSDGITLWAVRMSGIPKDKNHPYGHGKFETVGTFIIALLLLFTGIGVAGHVFNRMDAPV-------VPGTIALWMAGIAIIVKEALFHVTRMVGRRTGSRVLMANAWHHRSDAISSVAALLGIAGAQLGIPLMDPIAGMLVAGLIIKTGIDIGYESIRELTDETVEEDVISELGKIMSGIEGVDHYHEMRARRMGPHLLVDLHIQVDSMMSISAAHQVAERVRLEILEKLPAVNEVLVHVDAE 288          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Cation (diffusion facilitator family transporter n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0JN73_9EUKA)

HSP 1 Score: 260 bits (665), Expect = 1.000e-77
Identity = 155/314 (49.36%), Postives = 208/314 (66.24%), Query Frame = 1
Query:  778 TSSQQTNIESTEAAREVDAITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAV-AASVSIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRR------KQVPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKP----CPAMSS 1686
            T SQQ   E  E       ITWVGA VN+ L  FK FAG+ GHS+AMIADAGH+ SDL SD +TL +VR+S LP D DHPYGHGRFE+VG+  I  +LMG G   G  +   LR      A A  P    A+ AA VS+++KEAL++AT A+G+R  S VL+ANAWHHR+DA+SSVVA++ I GSM G  +LDP+AGL+V  MVA  G+++S +A+AQLTD +DY V +      + V GV   D+VR+R MG  +L+DL I+ D  +SAS+A ++ +  R  +L E+P V++V+V+  V+T P    CP  +S
Sbjct:   19 TRSQQKKAEYEENGSR---ITWVGAWVNLFLGVFKAFAGVYGHSTAMIADAGHTFSDLFSDGLTLLSVRMSSLPADVDHPYGHGRFESVGSLAIGTLLMGVGGSFGASAIAALR------APAVAPLGSVALWAAIVSVVSKEALYQATAAVGRRVRSPVLLANAWHHRSDALSSVVAVVGIGGSMIGWRVLDPLAGLLVGLMVAWMGLRISLEALAQLTDTSDYGVMQAAGDAARAVVGVEHVDQVRSRTMGGSSLIDLAIRVDPRLSASSAHRLAEEARLAVLKEVPEVSEVLVH--VDTSPHDVSCPLQTS 321          
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4B4U6_CHRCT)

HSP 1 Score: 259 bits (663), Expect = 3.740e-76
Identity = 145/295 (49.15%), Postives = 210/295 (71.19%), Query Frame = 1
Query:  835 ITWVGALVNVGLAGFKLFAGILGHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGAFIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASV-SIIAKEALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPMLDPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRKQ------VPGVVSFDRVRARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNIAVETKPCPAMSSLRPQ 1698
            ITW+GA VN+ L   KL AG+LG+SSAM++DAGHSLSDL+SD +TL  +R+S+LPPD+DHPYGHGRFE++G+  IA +L+ AG+  G  +++ LR        +  P    A+ A+V SI++KE LFRAT  IG+R NSQ+L+ANAWHHR+DA+SSVVA+L IAG+M G P+LDPIAGL+VAGMV+  G+++  +A+ +LTD  D++  +        +PGV    ++R+R MG  +LVDL IQ +  ++AS+A ++ + VR E+L  +P V++V+V+  V+T P  A   L+ Q
Sbjct:  138 ITWIGAAVNLFLTFVKLLAGLLGNSSAMLSDAGHSLSDLISDGLTLITLRMSQLPPDDDHPYGHGRFESLGSLGIAGLLLLAGFSFGASAYDALRRP------SLKPLGSIALFAAVASILSKEILFRATARIGRRLNSQMLMANAWHHRSDALSSVVAVLGIAGAMLGLPVLDPIAGLLVAGMVSSMGLRIGIEAVMELTDTHDFEATQSVHRVATGIPGVQRAWQIRSRSMGGASLVDLAIQVEPKLTASSAHKVAEEVRMEVLNSVPRVSEVLVH--VDTAPHDASCPLQTQ 424          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig755.15712.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Cation3.150e-28094.37efflux protein n=2 Tax=Ectocarpus siliculosus TaxI... [more]
Hypothetical4.050e-12251.11protein n=1 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
Hypothetical4.530e-10851.02protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical6.300e-9956.07protein n=1 Tax=Rhizochromulina marina TaxID=10348... [more]
Hypothetical5.260e-9348.59protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
Cation1.150e-8740.27efflux protein n=1 Tax=Nannochloropsis gaditana Ta... [more]
Hypothetical1.110e-7947.76protein n=1 Tax=Calcidiscus leptoporus TaxID=12754... [more]
Cation3.750e-7848.94transporter n=5 Tax=root TaxID=1 RepID=A0A3D5HED6_... [more]
Cation1.000e-7749.36diffusion facilitator family transporter n=1 Tax=C... [more]
Hypothetical3.740e-7649.15protein n=1 Tax=Chrysotila carterae TaxID=13221 Re... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig755contigE_fasciculatus_S2_contig755:21109..28012 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score791.2
Seed ortholog evalue3.2e-226
Seed eggNOG ortholog2880.D7G7A9
Model size1713
Hectar predicted targeting categorychloroplast
Exons10
EggNOG free text desc.cation transmembrane transporter activity
EggNOG OGsCOG0053@1,KOG1485@2759
Cds size1713
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig755.15712.1prot_E_fasciculatus_S2_contig755.15712.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig755 21109..28012 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842416.2806044-CDS-E_fasciculatus_S2_contig755:21108..212731696842416.2806044-CDS-E_fasciculatus_S2_contig755:21108..21273Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 21109..21273 +
1696842416.2939212-CDS-E_fasciculatus_S2_contig755:21822..222441696842416.2939212-CDS-E_fasciculatus_S2_contig755:21822..22244Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 21823..22244 +
1696842416.3081725-CDS-E_fasciculatus_S2_contig755:23044..232001696842416.3081725-CDS-E_fasciculatus_S2_contig755:23044..23200Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 23045..23200 +
1696842416.3291633-CDS-E_fasciculatus_S2_contig755:23689..238281696842416.3291633-CDS-E_fasciculatus_S2_contig755:23689..23828Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 23690..23828 +
1696842416.3411784-CDS-E_fasciculatus_S2_contig755:24457..246061696842416.3411784-CDS-E_fasciculatus_S2_contig755:24457..24606Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 24458..24606 +
1696842416.356398-CDS-E_fasciculatus_S2_contig755:25428..256121696842416.356398-CDS-E_fasciculatus_S2_contig755:25428..25612Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 25429..25612 +
1696842416.3673804-CDS-E_fasciculatus_S2_contig755:26153..263421696842416.3673804-CDS-E_fasciculatus_S2_contig755:26153..26342Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 26154..26342 +
1696842416.3767128-CDS-E_fasciculatus_S2_contig755:26662..267221696842416.3767128-CDS-E_fasciculatus_S2_contig755:26662..26722Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 26663..26722 +
1696842416.385858-CDS-E_fasciculatus_S2_contig755:27195..273121696842416.385858-CDS-E_fasciculatus_S2_contig755:27195..27312Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 27196..27312 +
1696842416.3955061-CDS-E_fasciculatus_S2_contig755:27880..280121696842416.3955061-CDS-E_fasciculatus_S2_contig755:27880..28012Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig755 27881..28012 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig755.15712.1

>prot_E_fasciculatus_S2_contig755.15712.1 ID=prot_E_fasciculatus_S2_contig755.15712.1|Name=mRNA_E_fasciculatus_S2_contig755.15712.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=571bp
MRFNSVGAAAAATAAAGLAGCAAFGGGGGGGGRGGAPHLRPRLPTAPSCG
SSRGRTTMSLHRDISRAAAAAAAAAAAVEEHGHSSRGAGLRRRDDDGNGR
GEGDRYFRRLRRRRRGGGPLFHGSHGHDDHNHGPAQDGLVNINHSAAGPA
ASLAVGDTVSPSHGGHSHGGGMGHSHSHAHFHVDMATLKKRPTLIRLFLA
SMCVLAVPLWRRSSRLEWAALGGVSMFLAAVDMSKFAISKLRVQVGQLYS
GWKAHSDLATSSQQTNIESTEAAREVDAITWVGALVNVGLAGFKLFAGIL
GHSSAMIADAGHSLSDLLSDAVTLWAVRLSRLPPDEDHPYGHGRFEAVGA
FIIAVMLMGAGYGIGNHSFETLREVINGGAHAAIPTRLTAVAASVSIIAK
EALFRATNAIGKRRNSQVLIANAWHHRTDAVSSVVALLAIAGSMCGAPML
DPIAGLMVAGMVALTGVQVSTDAMAQLTDAADYDVRRKQVPGVVSFDRVR
ARRMGPQTLVDLTIQTDDMISASAAQQIGQRVRWEILGELPFVADVMVNI
AVETKPCPAMSSLRPQEDIEQ
back to top

mRNA from alignment at E_fasciculatus_S2_contig755:21109..28012+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig755.15712.1 ID=mRNA_E_fasciculatus_S2_contig755.15712.1|Name=mRNA_E_fasciculatus_S2_contig755.15712.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=6904bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig755:21109..28012+ (Ectocarpus fasciculatus EfasUO2)
ATGCGCTTCAATAGCGTCGGGGCCGCGGCAGCTGCTACGGCGGCGGCGGG CCTCGCTGGTTGCGCCGCATTTGGAGGAGGAGGAGGAGGAGGAGGGCGGG GGGGCGCGCCGCACCTTCGCCCTCGCCTGCCGACTGCGCCGTCCTGCGGA TCTTCCCGTGGGCGGGTGAGTGCGTCGGCGACTCTTGCGTGGCTTCAGCA ACATTTTATTTTGCTCTCGGGGAGAGTGCGCAACTGCAACGCAGCATGGT ACATGTACATGTTATCTCATCTCAGTAGCAGACGACGGCTCTTTTTTTAT CTCTGCTTTTTTGGAATCCCGAGCAAGAATGAGAAAGACGTGAGCGGTCG CATGTTCTGTGCGATGGGAGCTCGTGCTGCCACTCTATAGCTCTACAGCA GTGTGTTGGCTTTCCGCGAGCCGGTAGTCAATCCAGCAGCTGAAAAGGGG TTACAATCCGCAATGCCTGCTGGCCGATCTACAGCAGCGGCAGGATGGCG CCGCTTCGAACACCGGTCTGCACACACAAAGAGACGCAGCAGTCGGCCGA GAGCACCGAATGCACTTGCACCATTGCCCAACACCAGCAGCGGTCGCCGT ACGCTGCTCTTCATCTGGCGGCTCAACCCTCTAGACCTTACTGATGCAAC AAACAACCCCCCGGGGGTGCCTGCCCGTGCTGTAACGCCCCCTGCCGCCC CCCTTCGAAAACAGACGACGATGAGCCTCCATCGCGATATCTCGCGAGCG GCGGCGGCGGCGGCGGCAGCAGCAGCGGCGGTGGAGGAACACGGGCACAG CAGTCGGGGCGCGGGGCTTCGGCGACGAGACGACGACGGAAACGGCAGGG GCGAAGGCGACCGCTATTTCCGGCGGCTCCGGCGCAGGCGGCGAGGCGGA GGGCCGCTCTTCCACGGGAGCCACGGGCACGACGACCACAACCACGGCCC CGCCCAAGACGGGCTCGTCAACATCAACCACAGCGCGGCAGGCCCAGCCG CTTCTCTCGCCGTTGGGGACACGGTGTCGCCTTCCCACGGGGGTCACTCG CACGGCGGCGGGATGGGCCACAGCCATAGCCACGCCCACTTCCACGTCGA CATGGCCACGCTCAAGAAACGACCAACCCTCATCAGGTACGGGGGATGCT GGTGTGGGGGGCGATCTCCCCCGTGGTTTGTGTATCTCCGCTTGCTGGAA GCTAGCATTGTGGGTTGTGTTGCATGATTCCTCTGCGCTTGTTGTCGCAG ATTCTCTTCCGCGTCTATTCCGCGTCTCTCCCCCCCCCCCCGTGTTCATG TAGTTGCGGCATGCTCGTTGTACAAGGAGGAGAGGGAATTGTACATGACT GAGCTGGGAAAATAGAAGGAAGGTACAGGAAGATGTTTGAGGTGTGGAAC AGGGAGGACAAGACAATAGCTGCTGGGGCATAGCAAGTGGGTAGAAAAGG CGGGAAGTGACATCGGTAGGATAGATAGACTAGGGGAGAAATGTTTTAGG CGCCTTTGGCACAAAAGGAAGGAACGGTTGGCCATCGGTGATCGGTCCTG TGGGAACAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCTAACGA CTAAGGCATGACAAACATATGAGCACCCACCCCCCCCCCCCCCCCCACAC AAAACATACTATAANNNNNNNNNNACGCTCATGTACCCGTTTTCCCTGAC CGGCGCTTTTGGGATTTTTGTGCGATTTTGTTTTCCGCGTCTTTTCCGCG GGCCCCCCCCCCCCCCCCGATATTCAAAGTCGAATATGTGCACACCGTGG TTACGACGAAAATGTACCACGGTCGAATATTCTTGAACATACGACGCAGC AGCAATGGGAATTCGCGGAGGAGCCACCCGTCACCCACACGCGTACCGCA ACGTATGCATAAACGATGGTTTTTGTCTCCCCGCAGGCTATTCTTGGCTT CGATGTGCGTTCTCGCGGTTCCGCTCTGGCGGCGCAGCAGTCGGCTGGAG TGGGCGGCCCTGGGAGGGGTCTCGATGTTCTTGGCCGCCGTGGACATGAG CAAGTTCGCCATCAGCAAGCTGAGGGTGCAAGTCGGACAGCTGTGAGTGT TGGTTGGTCGAGAAGGAGCACGCCACTCTTGGCGACGCTGTCGTGCTGTT TCGTTTTGCGTCTTTGGGGAGTAAACAAGAGAGACAGGTGCCGTGCTGGC TTTTGGTGACGGACGAAGAACCTGGCCGGTGTGTCGCGCTTGAGGTTGAG AGTGGTAAACTGATTCATGCTCTTCTTGCACACGTATTCTCTAGAGTGTG TTTTTGTGTTACGTCATGGACGTCTGTCTGGCACATACTTTCTTCCTTGT CCGAGATGTCGCCCGTAGCTCGTTCGCGTCGTTGGTTTGTTTGCGGTTTG TTTCTAGCCCGCTTTGAAACGGGAAGCCGTCGCCAGCAGCATCTTCCAAG CCAGCAGCTGGAGAAGCTAGCGTGCGGCGTTAGGGCGAGAGAGTGGTATG CTACAACGAGGACTCTTGTTGATTTTCGCTCTACTCTCTCATTTGTTTGT TGTCTCGACGATACAATCCCGGATACGGCAGGTACTCGGGCTGGAAAGCC CACTCCGACCTGGCCACTAGCAGCCAGCAGACAAATATAGAGTCGACGGA GGCGGCTCGGGAAGTGGACGCCATCACGTGGGTTGGGGCGCTCGTTAACG TCGGTCTCGCAGGTTTCAAGGTGAGCTAGATGGGTGTTTTACTCGGTGGC GCTGAGTTGTTCGGCCTTGTGTAGCTGCCCATCTGTTTGGATACTGCTGT ACGATGAAATTTTCCTTTGTTTTTTCTGGTGCTGGTGGTGGTAAACTGTT GGTGGTTGTGGTGACGGCGACGGCGTTGGTGTCTGCTACTTTCGCCTGTT GTTCCGTTGCCGCTGCCTGGCGCAGACGGCGGGCTTCGTCTCTCCTTTTC TTGCTCCCTCTCTCCCTGACGCCTCCCCATCTCTTTTCTCTTTTCCCACC TTGTCGTTGTCCCTCCCTCTGCTGCCATTTGTACTCATTCGTTTGCTTCA AAACCGACCATCGTTTCCTACTTTTTTTTGTATCGTTGTGTGTGCTTCAA ACCCTCGACGCCTCCTAATTTTTCATTTATTTCCATGTGTGAGTGTTTCA ACCTCCACGCTTTCAAAGTTTCCACTGGTATTATTGTGCGAGTGCTTCAA AACCTCCACGCTTCCTACGTTTATATTTATTTTCATGTGTGCGTTGGAAA TCTCTCATTTTTTTTTCTTCCTACAATTGGCATGTATACTCCATGATGTG TGTGTGAGTGTGTTTCAAAACTTGCATCACTTGCCTAAATTCTTTCCAGC TATTCGCGGGCATCTTGGGGCACTCTTCGGCGATGATCGCGGACGCCGGC CACTCCCTGTCGGACCTCCTCTCCGATGCCGTCACCCTCTGGGCCGTCCG CCTGAGCCGGTTGCCCCCGGACGAGGACCACCCTTATGGCCACGGCCGGT GAGAGGAGGGGGGTGGGGGGGCAGGGGGAGGGGCGTGCGATATCTGTCTA TCGGGCGTGTCATGGAGAGGCTTGTGTGTGGGGGGGGAGTCGGGAAGGTA TTGAGCGTTTGGTGTGGCTCCGTGTCGCGTTGACCATGGGGTCGTGGTTC TGTTGCGAGAGATGCCAACAGCAGGGAGGGGTGGCTGGGTGTGTTGACCA CTCGTGCATGGCGAGATGGGACGGCAAGAGCGGGGCCGGGGGGGCGGAGG GACATACAGCCAACAAAGATGAGGCATAAAATCATGTACCGTGCAATTCC TTCGAAGCGGAGCGGGAGTTGGGTGGAAGATTGTGCTGAATTGCACTCAC TAGGCTGTGCGGAATTCGCATACCATTGAACTTCTGTGAAGAAGCTACAA CCGGCCGAGCCGGGTCAGCATAAGAGTAGACCGTCGATGGTTGCAGCTAC AGCCGACGCTCGTGCCAAGCGCGGTGATCGAGCAACGACGGTGTGCGTCG CCCCTCGATGGGTCTCATTATTGTGTGGTGCTTTCCGTTGCCCAGCCCAA CGAGCGTCGAGAGTGGCGGCCAATAACTTGTCTCCCCCCCCCCCCCGGAA ACCTGTATATGACCATGGTACAGGAACGGCCTGGGGCAGACGTTTTGTAG ATTGAAAGTACACATGCATACTTGAGGATGCGCTTCTTTGTCTAGGACGC ACATGAAGCACATGGTCCATATGGCAGTGACGGCGGCTGAAGACTGATTT TTTCCATCGCATTATTGCGCGCGTTCTTGTGATGTGCCCCCGCCCGTGTG TGTTTTTTTGCGGTGCACAGGTTTGAAGCGGTGGGTGCGTTTATCATCGC AGTGATGCTCATGGGGGCAGGGTATGGCATCGGCAACCACTCGTTCGAGA CGCTCAGGGAGGTCATCAACGGAGGCGCGCACGCGGCGATACCGACGCGC TTGACGGCGGTGGCGGCTAGCGTCAGCATCATCGCCAAGGAGGCATTGTT CCGGGTAGGGGGTGTTTGCTCCTGTGGGTTGTTGTAGGTGTCGTAGTGGT CGTCGTCGTTGTTGCTGTTATTGTTGGTGGTGGTGGTGTTCGCTGTCGCC GCTGCTGCTGTTGGTGGTGGCGGTGTGGTGTTGACATTGCTGATGGTGCT GCTACTGCTGTTGCTGTTGTTGTTGTTGTTGTTGTTGTCACCGTCGTCGT CGTCGTCGTTGTTATTGTTGCCGTTTTCGTGGGCGCTATGAGTGCATCGA GAGGGTTGGTTGTGGTTTGGTGCTGGCTGTTACCCGTTGGAGGTGAACAA TGCGGAAGGTGGAGGAACCCCGTCCAGGAAGTGGCCGATGCACGAAGGCG CTATCGAAGGGTAGTGATAGTGTAAAGCCCATGTGAAATGTGCCACCGTC CATGTACATGTTGCGCGCGTTCGAGACGACGATGGTCGTAGATGGCATGG CCGTGAGCGCTGCCTTATCCTGCCGATCAATACCACCCACCCACGCCACG CATACCCTAACGAGCCAAATCTCCCTGCGCCCCCCTCCTCCTCAGGCGAC CAACGCCATAGGCAAGAGGCGGAATTCCCAGGTGCTGATCGCGAACGCGT GGCACCACCGCACCGACGCCGTGTCCTCGGTGGTCGCTCTGCTCGCCATC GCGGGCTCCATGTGCGGCGCTCCGATGCTGGACCCGATTGCCGGGCTCAT GGTGGCGGGGATGGTGGCCCTGACCGGGGTTCAGGTGTGTTGTGCGCGGC TTTGGGGCCGTTTGATGGAGATGTGTGTCCGCTTGCCGCCTGGGATGTTA TTTTTCGGGCGTGTGCTGTATGCTTTGTTTTGCGTGTTTCGGATGTGGAA GGCACGCAAGCAATTGAAGGTCCCCGCCGCCTGAAGGGCGTAGACCCTGA GCACGGCGCTCGAAATCGATCCGCCTCTTGCTCCACGCGTCGTTTGCGAA ACTCGATTGATTTGGGCTATATGTTTTTTTATTTTTTTTCTTGGATACAT GCGCAACCCGACTGTTGTTTTCTCATTCCTGTCGTTGTGTCTGTTTATTC CCAGGTATCGACGGACGCCATGGCGCAGCTAACAGATGCCGCTGACTATG ACGTCCGCCGCAAGGTTGCGGAGATAGCCACGCAGGCAAGCCAAAAAAAA ACTACTTATTAAATCGTTTGCTACGGGAAGCAAGCGCAGTTCTTAACTTC TATTTGGCCATGGCCTGTCTGGCGGATGAATCGATCGCGTCGCGTGCGAC GCCTCACGCACCGCTCATGATACAGTGAGAGCGGGGGGCACGCAAACGTG CAGTTTTGCATTACGGATGTTGTATTTCATGTACAAGATGTTACGGCCCT TTGCACGTGCTTGATGGAGCAAATCCTTACTGCCGCTGTCAATGACGACG GCTGTGCACCTATCACTATCCACTGCTCTTGCGCGCCTATCCCTCTCGAG AGCTTGTTACGTCACGCTTGCCTCTATGGACAATCCTGGTCGCGTTGCTT ACTCGTGAATTCGTCGAATTCCCTCTCTGACGTCAATCAACCCGTGATGC GATTGATTTCATTTTGTACAACCGCCCGCGCGGAGAGCAGGTGCCCGGGG TGGTGTCCTTCGACCGCGTGCGAGCACGAAGGATGGGTCCGCAGACCCTG GTAGACCTCACCATACAGACGGACGACATGATCTCAGCCTCGGCGGCACA GCAGGTGATTGGTTGGTTGGTTGGTGAGGTGGGGGGTCGGCGGGGCCCCC TCGGATACATATTCTGTCAAGGCGCTTGACGTAATAACCAGGAACATCGG AAGGGAGACAAAAAGTCATAATAGTTTGCAGCTCGCTCACAGCAGTGTGT GTGTGTTTTGTGTTTTCGACCTTTAAATACTGGCGACACCAGTCCCCCCA TTTTCCTTGGTGAGACGTGCACTACACTTTTCAGTGTTTTTTTCGTACAA CTACAACCACCACAGGGTCACACGGAAGGGGGTAACCACCAGGGCTTTTA TCTTCTTTTTGTTTATTTTCGTGCCCCACCTTCCTCCTGCGGTGCGTCCT GAAATTTATTTTTATAGAGAGATTCATTTTGGCGTTCGCATTCAGAGGAT TTTTTTTAATTTTGCCCCCCCTTCAAGGGACCTTGGTTTTACGTACCCGC TGGCACCACGACATTTTGTTTTTGCTCAGGCAATCGGCGCGGTCGATGAT AGTATCAAAGACATGTGTCGGCATACTCTAGTGTCTAAGGGACCCCCCCC CTCTCTCTCCGAAACAATGCAGATTGGCCAGCGAGTGAGGTGGGAGATCT TGGGAGAGCTCCCCTTCGTGGCGGACGTGATGGTCAACATCGCAGTCGAG ACTAAGCCCTGCCCGGCGATGAGCAGCCTTCGACCGCAGGAGGACATCGA GCAG
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig755:21109..28012+

>mRNA_E_fasciculatus_S2_contig755.15712.1 ID=mRNA_E_fasciculatus_S2_contig755.15712.1|Name=mRNA_E_fasciculatus_S2_contig755.15712.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1713bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig755:21109..28012+ (Ectocarpus fasciculatus EfasUO2)
ATGCGCTTCAATAGCGTCGGGGCCGCGGCAGCTGCTACGGCGGCGGCGGG
CCTCGCTGGTTGCGCCGCATTTGGAGGAGGAGGAGGAGGAGGAGGGCGGG
GGGGCGCGCCGCACCTTCGCCCTCGCCTGCCGACTGCGCCGTCCTGCGGA
TCTTCCCGTGGGCGGACGACGATGAGCCTCCATCGCGATATCTCGCGAGC
GGCGGCGGCGGCGGCGGCAGCAGCAGCGGCGGTGGAGGAACACGGGCACA
GCAGTCGGGGCGCGGGGCTTCGGCGACGAGACGACGACGGAAACGGCAGG
GGCGAAGGCGACCGCTATTTCCGGCGGCTCCGGCGCAGGCGGCGAGGCGG
AGGGCCGCTCTTCCACGGGAGCCACGGGCACGACGACCACAACCACGGCC
CCGCCCAAGACGGGCTCGTCAACATCAACCACAGCGCGGCAGGCCCAGCC
GCTTCTCTCGCCGTTGGGGACACGGTGTCGCCTTCCCACGGGGGTCACTC
GCACGGCGGCGGGATGGGCCACAGCCATAGCCACGCCCACTTCCACGTCG
ACATGGCCACGCTCAAGAAACGACCAACCCTCATCAGGCTATTCTTGGCT
TCGATGTGCGTTCTCGCGGTTCCGCTCTGGCGGCGCAGCAGTCGGCTGGA
GTGGGCGGCCCTGGGAGGGGTCTCGATGTTCTTGGCCGCCGTGGACATGA
GCAAGTTCGCCATCAGCAAGCTGAGGGTGCAAGTCGGACAGCTGTACTCG
GGCTGGAAAGCCCACTCCGACCTGGCCACTAGCAGCCAGCAGACAAATAT
AGAGTCGACGGAGGCGGCTCGGGAAGTGGACGCCATCACGTGGGTTGGGG
CGCTCGTTAACGTCGGTCTCGCAGGTTTCAAGCTATTCGCGGGCATCTTG
GGGCACTCTTCGGCGATGATCGCGGACGCCGGCCACTCCCTGTCGGACCT
CCTCTCCGATGCCGTCACCCTCTGGGCCGTCCGCCTGAGCCGGTTGCCCC
CGGACGAGGACCACCCTTATGGCCACGGCCGGTTTGAAGCGGTGGGTGCG
TTTATCATCGCAGTGATGCTCATGGGGGCAGGGTATGGCATCGGCAACCA
CTCGTTCGAGACGCTCAGGGAGGTCATCAACGGAGGCGCGCACGCGGCGA
TACCGACGCGCTTGACGGCGGTGGCGGCTAGCGTCAGCATCATCGCCAAG
GAGGCATTGTTCCGGGCGACCAACGCCATAGGCAAGAGGCGGAATTCCCA
GGTGCTGATCGCGAACGCGTGGCACCACCGCACCGACGCCGTGTCCTCGG
TGGTCGCTCTGCTCGCCATCGCGGGCTCCATGTGCGGCGCTCCGATGCTG
GACCCGATTGCCGGGCTCATGGTGGCGGGGATGGTGGCCCTGACCGGGGT
TCAGGTATCGACGGACGCCATGGCGCAGCTAACAGATGCCGCTGACTATG
ACGTCCGCCGCAAGCAGGTGCCCGGGGTGGTGTCCTTCGACCGCGTGCGA
GCACGAAGGATGGGTCCGCAGACCCTGGTAGACCTCACCATACAGACGGA
CGACATGATCTCAGCCTCGGCGGCACAGCAGATTGGCCAGCGAGTGAGGT
GGGAGATCTTGGGAGAGCTCCCCTTCGTGGCGGACGTGATGGTCAACATC
GCAGTCGAGACTAAGCCCTGCCCGGCGATGAGCAGCCTTCGACCGCAGGA
GGACATCGAGCAG
back to top