prot_E_fasciculatus_S2_contig7533.15699.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7533.15699.1
Unique Nameprot_E_fasciculatus_S2_contig7533.15699.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length251
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7533.15699.1 vs. uniprot
Match: A0A6H5KTG8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KTG8_9PHAE)

HSP 1 Score: 429 bits (1103), Expect = 1.430e-147
Identity = 215/252 (85.32%), Postives = 233/252 (92.46%), Query Frame = 0 
Query:    1 MIIRPRQSSLSPVAVAAASAALLLG-SSPAALGAPVVVTDYKQLVGTIGSNDDYGTGERFSREGIVLVHKGDESCSPDFDLLGLSGFDKHPEMYSLVSVDAEHADKELLDKLGVDPAILSKPSKCPSLSVVPRRSTVEAPAVSLPALDKKGSYHLNAVKTQQVSVGIVNEMDFPLDIHYQWWDDPARPTHIRTLSPGTENWMLSFKTTVVLALNKETQEEVSRFLVKGHGLFTVAERSCTAETCGTSEGAET 251
            M +RPRQSSL+PVAVA ASAALLL  SSP   GAPVVVTDYKQLVGTIGSN+DY TGERF+REG+VLVHKGDESC+PDFD LGLS F  HP+MYSLVSVDA+HADKELLDKLGVDPA LS+P KCPSLS+VPRRSTVEAPAV LP LDK+GSYHLNAVKTQQVSVGIVNEMDF LDIHYQWW++P +PTHIRTL+PGTENWMLS+KTT+VLALNKETQEEVSR+LVKGHGLFTVAERSCTAETCGTSEG ET
Sbjct:    1 MSVRPRQSSLNPVAVALASAALLLSTSSPVVSGAPVVVTDYKQLVGTIGSNNDYDTGERFAREGMVLVHKGDESCAPDFDTLGLSVFGDHPDMYSLVSVDADHADKELLDKLGVDPATLSEPKKCPSLSIVPRRSTVEAPAVILPTLDKRGSYHLNAVKTQQVSVGIVNEMDFDLDIHYQWWNEPVKPTHIRTLAPGTENWMLSYKTTLVLALNKETQEEVSRYLVKGHGLFTVAERSCTAETCGTSEGTET 252
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7533.15699.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5KTG8_9PHAE1.430e-14785.32Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..12
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..32
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 13..24
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 33..251
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..32
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..32
score: 0.565

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7533contigE_fasciculatus_S2_contig7533:3455..7348 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7533.15699.1mRNA_E_fasciculatus_S2_contig7533.15699.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7533 3455..7348 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7533.15699.1 ID=prot_E_fasciculatus_S2_contig7533.15699.1|Name=mRNA_E_fasciculatus_S2_contig7533.15699.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=251bp
MIIRPRQSSLSPVAVAAASAALLLGSSPAALGAPVVVTDYKQLVGTIGSN
DDYGTGERFSREGIVLVHKGDESCSPDFDLLGLSGFDKHPEMYSLVSVDA
EHADKELLDKLGVDPAILSKPSKCPSLSVVPRRSTVEAPAVSLPALDKKG
SYHLNAVKTQQVSVGIVNEMDFPLDIHYQWWDDPARPTHIRTLSPGTENW
MLSFKTTVVLALNKETQEEVSRFLVKGHGLFTVAERSCTAETCGTSEGAE
T
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