mRNA_E_fasciculatus_S2_contig7526.15689.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Nitrite (transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSE1_ECTSI) HSP 1 Score: 389 bits (1000), Expect = 3.460e-123 Identity = 198/204 (97.06%), Postives = 202/204 (99.02%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 614
SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKAT ANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKV+SPFL TFLKG+VCNWMVCMAVWVAAGA+SLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQD+FVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK
Sbjct: 126 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATVANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVSSPFLPTFLKGIVCNWMVCMAVWVAAGATSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDLFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 329
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Formate/nitrite (transporter n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZQ31_9STRA) HSP 1 Score: 284 bits (726), Expect = 1.410e-84 Identity = 140/206 (67.96%), Postives = 166/206 (80.58%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK*R 620
+ NPGLQKL FG FGLPFGLFMVLVAGGELFTGN A+V+AA EGKA+ L+K+W+ S+ GN +G++L+ KL+VAAG+ P A IAV+KVA PFL TFL+G+VCNWMVCMAVWVA+G S+L EKYLAM+LPVSAFVAFGAEHS+ANM L+PLG+ GA V W D KN+LPVTLGNIVGGALCQ PY +VYG+L K R
Sbjct: 55 TLNPGLQKLFFGAFGLPFGLFMVLVAGGELFTGNVAMVSAAFFEGKASLEGLLKSWSISFIGNFIGTILVCKLIVAAGMLTVPAIATEIAVAKVAKPFLTTFLRGIVCNWMVCMAVWVASGCSTLGEKYLAMVLPVSAFVAFGAEHSIANMALIPLGMAGGAK--VKWIDFLTKNLLPVTLGNIVGGALCQAAPYGSVYGTLGKKR 258
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Nitrite (transporter NAR1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G4R6_ECTSI) HSP 1 Score: 236 bits (601), Expect = 7.010e-66 Identity = 113/202 (55.94%), Postives = 148/202 (73.27%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGSL 608
+ NPGLQK++FG FGLPFGLFM +V GGELFTGNTA+VTAA++EGKA+ L+KNW S+ GN +GS+LL L V G+ PG+A IA +K + F+Q F +G++CNW+VCMAVW++ AS K+ A+ LP+SAFVA G +HSVANMFL+PLG+ GA V+W + N+LPVTLGNIVGGA+ Y+ +GSL
Sbjct: 140 ATNPGLQKIIFGAFGLPFGLFMTVVGGGELFTGNTAVVTAAVIEGKASIGGLLKNWVFSYLGNFVGSLLLVFLAVQGGVVVNPGSAMGIATAKTSLTFVQAFARGILCNWLVCMAVWMSVSASDAAGKFFAIFLPISAFVALGLDHSVANMFLIPLGMALGAG--VTWSQFLLANLLPVTLGNIVGGAVAVCGLYSGAFGSL 339
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Putative (formate/nitrite transporter n=1 Tax=Emiliania huxleyi TaxID=2903 RepID=R1B4P7_EMIHU) HSP 1 Score: 233 bits (594), Expect = 1.460e-65 Identity = 122/202 (60.40%), Postives = 152/202 (75.25%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAA-IAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGS 605
+NPGL KL+ G FGLPFGL M L++G ELFTGNTALVT AL+EGKAT A LVK+W S+AGNL GS+LLA LV AAG+ A G AAA +AV+K + FL T LKGV+CNW+VCMAV++A+ A K + + +S+FVA G EHSVANMFL+PLG+ SGA VSW+ +KN+LPVTLGNIVGGA+C + +V+GS
Sbjct: 95 ESNPGLHKLVLGAFGLPFGLMMTLLSGAELFTGNTALVTMALIEGKATTAGLVKSWVSSYAGNLAGSLLLAGLVSAAGVLAGGGAAAAKVAVAKTSGAFLPTLLKGVLCNWLVCMAVYLASFAKDAAGKMVIIGFIISSFVAMGLEHSVANMFLIPLGILSGAD--VSWKAFLLKNLLPVTLGNIVGGAVCVGAAFCSVFGS 294
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Hypothetical (protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A6U5HVT6_9STRA) HSP 1 Score: 233 bits (593), Expect = 6.570e-65 Identity = 110/201 (54.73%), Postives = 153/201 (76.12%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGS 605
S+NPGLQK++FG FGLPFGL M L+ GGELFTGNTALVTAA EGK + ++L+KNW+ S+ GN +GS+LLA L G + +AAIA +K + PFL F++G++CNW+VCMAV++A+G S++ K +A+ P+SAFVA G +HS+ANMFL+PLG+ GA +++ MF+KN++PVTLGNIVGGALC + + +G+
Sbjct: 129 SSNPGLQKIIFGSFGLPFGLIMTLITGGELFTGNTALVTAAYAEGKTSMSDLIKNWSASYLGNFVGSLLLAYLAYTGGTLGSAPASAAIATAKCSMPFLTAFVRGILCNWLVCMAVYMASGISTMGGKMVAVYFPISAFVALGLDHSIANMFLIPLGMMRGAEVTIA--QMFMKNLIPVTLGNIVGGALCVAGGFGSAFGN 327
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Hypothetical (protein n=2 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0GAY3_9STRA) HSP 1 Score: 231 bits (588), Expect = 1.550e-64 Identity = 115/201 (57.21%), Postives = 148/201 (73.63%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGS 605
+ANPGLQK++FG FGLPFGL M LV G ELFTGNTALVTAA +EGK T +L+K+W S+ GN +GS+LLA L G AAAIA +K + PF F++G++CNW+VCMAV +A+G SS+ K A+ P+SAFVA G +HSVANMFL+PLG+ GA +++ DMF+KN++PVTLGNIVGGA+C PY +GS
Sbjct: 106 AANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAARMEGKITTKDLIKSWVSSYLGNFVGSLLLAYLAFNGGTLGNGPAAAAIATAKCSLPFKVAFIRGILCNWLVCMAVLMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFLIPLGMMRGAEITIA--DMFIKNLIPVTLGNIVGGAVCVMAPYGKTFGS 304
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Hypothetical (protein n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6S9B5G3_9STRA) HSP 1 Score: 229 bits (583), Expect = 6.900e-64 Identity = 115/204 (56.37%), Postives = 147/204 (72.06%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 614
SANPGLQK++ G FGLPFGL M LV GGELFTGNTALVTAA+ EGKAT +L KNW S+AGN +GS+LLA L +G A A+A +K + PF F++G++CNW+VCMAV++A+G +SL K A+ P+SAFVA G +HSVANMF++PL + GA +V +DMFVKN++PVTLGNIVGGA P+ +G K
Sbjct: 103 SANPGLQKIILGAFGLPFGLIMTLVTGGELFTGNTALVTAAVAEGKATKQDLAKNWIASYAGNFVGSLLLAYLAFKSGTLGDAPAAVAVATAKCSLPFDVAFVRGILCNWLVCMAVYMASGCTSLVGKMTAVWFPISAFVALGLDHSVANMFMIPLAILRGAEITV--KDMFVKNLIPVTLGNIVGGAFFVMAPFGTTFGKWFK 304
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Formate/nitrite (transporter family member n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BXN4_THAPS) HSP 1 Score: 227 bits (579), Expect = 8.040e-64 Identity = 112/204 (54.90%), Postives = 148/204 (72.55%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 614
ANPGLQK++FG FGLPFGL M LV G ELFTGNTALVTAA++EGK T +L+KNW S+AGN++GS++LA L +G + AIA +K + PF F++G++CNW+VCMAV++A+G +SL K +A+ P+SAFVA G +HSVANMF++PLG+ GA +V D KN++PVTLGNIVGGALC Y + +G K
Sbjct: 66 EANPGLQKIIFGAFGLPFGLIMTLVTGAELFTGNTALVTAAVMEGKTTTKDLIKNWVASYAGNVVGSLILAYLAFKSGTLGNAPASVAIATAKCSLPFETAFVRGILCNWLVCMAVYMASGCASLAGKMVAVWFPISAFVALGLDHSVANMFIIPLGMMRGAQITVG--DFITKNLIPVTLGNIVGGALCVMGIYGSAFGKWFK 267
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Hypothetical (protein n=1 Tax=Helicotheca tamesis TaxID=374047 RepID=A0A7S2DZW8_9STRA) HSP 1 Score: 228 bits (581), Expect = 1.300e-63 Identity = 113/204 (55.39%), Postives = 148/204 (72.55%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGSLLK 614
+NPGLQK++ G FGLPFGL M LV+GGELFTGNTALVTAA+ EGKAT +L KNW S+ GN +GS+LLA L + A A+A +K + PF F++G++CNW+VCMAV++A+G SS+ K A+ P+SAFVA G +HSVANMF++PLG+ GA +++ DMF KN++PVTLGNIVGGALC P+ +GS K
Sbjct: 102 QSNPGLQKIILGAFGLPFGLIMTLVSGGELFTGNTALVTAAVNEGKATKKDLAKNWIASYLGNFVGSLLLAFLAYKSQTLGTGPAAVAVATAKCSLPFEVAFVRGILCNWLVCMAVYMASGCSSMIGKMTAVWFPISAFVALGLDHSVANMFMIPLGIMRGAEITIA--DMFTKNLIPVTLGNIVGGALCVMAPFGTTFGSWFK 303
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZQ46_9STRA) HSP 1 Score: 228 bits (580), Expect = 2.140e-63 Identity = 112/201 (55.72%), Postives = 151/201 (75.12%), Query Frame = 3
Query: 3 SANPGLQKLLFGLFGLPFGLFMVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAKLVVAAGINAAPGTAAAIAVSKVASPFLQTFLKGVVCNWMVCMAVWVAAGASSLTEKYLAMILPVSAFVAFGAEHSVANMFLLPLGLFSGASKSVSWQDMFVKNILPVTLGNIVGGALCQTMPYAAVYGS 605
+ NPGLQK++FG FGLPFGL M LV GGELFTGNTALVTAA EGK + +L+KNW S+ GNL+GS+LLA L +G AA +AAIA +K + P+ F++G++CNW+VCMAV++A+G +S+ K A+ P+SAFVA G +HSVANMF++PLG+ GA ++ + +KN++PVTLGNIVGGALC P+ +V+GS
Sbjct: 109 AENPGLQKIIFGSFGLPFGLIMTLVTGGELFTGNTALVTAAYKEGKISGKDLIKNWVSSYTGNLVGSLLLAYLAYKSGTLAASPASAAIATAKCSLPWDVAFVRGILCNWLVCMAVYMASGCASMAGKMTAVYFPISAFVALGLDHSVANMFIIPLGMLRGADITI--KAFLMKNLIPVTLGNIVGGALCVMAPFGSVFGS 307 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7526.15689.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7526.15689.1 >prot_E_fasciculatus_S2_contig7526.15689.1 ID=prot_E_fasciculatus_S2_contig7526.15689.1|Name=mRNA_E_fasciculatus_S2_contig7526.15689.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=184bp MVLVAGGELFTGNTALVTAALVEGKATFANLVKNWTCSWAGNLLGSVLLAback to top mRNA from alignment at E_fasciculatus_S2_contig7526:1619..6634- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7526.15689.1 ID=mRNA_E_fasciculatus_S2_contig7526.15689.1|Name=mRNA_E_fasciculatus_S2_contig7526.15689.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5016bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7526:1619..6634- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7526:1619..6634- >mRNA_E_fasciculatus_S2_contig7526.15689.1 ID=mRNA_E_fasciculatus_S2_contig7526.15689.1|Name=mRNA_E_fasciculatus_S2_contig7526.15689.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=552bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7526:1619..6634- (Ectocarpus fasciculatus EfasUO2)back to top |