mRNA_E_fasciculatus_S2_contig751.15674.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig751.15674.1
Unique NamemRNA_E_fasciculatus_S2_contig751.15674.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Basal (body protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTQ9_ECTSI)

HSP 1 Score: 781 bits (2016), Expect = 1.600e-272
Identity = 459/503 (91.25%), Postives = 470/503 (93.44%), Query Frame = 1 
Query:    1 MSASGGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERSSLLLEKRAEAEREESRCLGAQKDLRISELEAQQVDQLRTSLAGALDGAAATQEDLAGGGAGRATARRRSRVQGLNGLDREMEVSSPMLPLSSREGGGRGGVRSXXXXXXXXDGGMGMGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESREEEITRLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEAREETSKRGKAEPMTTPAELEVTRLQTLARTLEKDNARLSRRTAELETTASANSSGKGEGEEDGWEVVGEGEHDRARLEETLAETKQDLDKAAAAASEATADAETLRQRVASVQGEVARLQGEAETRTESLERLSREREELLERLKTSANDLESAEGEAASGVARERKAERQRGEEARRSR 1509
            MS S GVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERS LLLEKRAEAEREESRCLGAQKDLRISELEAQ VDQLRTSLAGALDGA ATQEDLAGG  GRATARRRSRVQGLNGLDREMEVSSPM+PLSS EGGGRGG RS        D GMG+GPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESREEEI RLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEAR+ETS RGKAEPMTT AELEVTRLQTLARTLE+DN RLSRRTAELE  ASANSSGKG GEE+GWEVVGEGEH+R++LE TL ETK+DL KAAAAASEATADAE LR+RVASVQGEVARLQGEA TRTE LE+LSREREELLERLKTSA DLESAE EAASGVARERKAERQRGEEARRSR
Sbjct:    1 MSTSAGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERSFLLLEKRAEAEREESRCLGAQKDLRISELEAQ-VDQLRTSLAGALDGATATQEDLAGGRTGRATARRRSRVQGLNGLDREMEVSSPMMPLSSHEGGGRGGARSGSGRRREDDVGMGLGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESREEEIARLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEARKETSNRGKAEPMTTTAELEVTRLQTLARTLEEDNDRLSRRTAELENKASANSSGKGGGEEEGWEVVGEGEHERSQLEATLGETKKDLVKAAAAASEATADAEALRKRVASVQGEVARLQGEAATRTERLEQLSREREELLERLKTSAKDLESAEVEAASGVARERKAERQRGEEARRSR 502
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYV9_9PHAE)

HSP 1 Score: 551 bits (1420), Expect = 2.350e-180
Identity = 329/364 (90.38%), Postives = 340/364 (93.41%), Query Frame = 1 
Query:  418 VDQLRTSLAGALDGAAATQEDLAGGGAGRATARRRSRVQGLNGLDREMEVSSPMLPLSSREGGGRGGVRSXXXXXXXXDGGMGMGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESREEEITRLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEAREETSKRGKAEPMTTPAELEVTRLQTLARTLEKDNARLSRRTAELETTASANSSGKGEGEEDGWEVVGEGEHDRARLEETLAETKQDLDKAAAAASEATADAETLRQRVASVQGEVARLQGEAETRTESLERLSREREELLERLKTSANDLESAEGEAASGVARERKAERQRGEEARRSR 1509
            VDQLRTSLAGALDGAAATQEDLAGGG GRATARRRSRVQGLNGLDREME SSPM+PLSSREGGGRGG RS XXXXX  DGGMG+GPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESREEEI RLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAE REE S RGKAEPM TPAELEVTRLQTLARTLE+DNARLSRRTAELE TASA+SSGKG+GEE GWE VGEG H+RARLEETLA TK+DL KAAAAASEATADAETLR+RVASVQGEVARLQGEA  +TE LE+LSREREELLERLK SA DLESAE EAASG ARERKAERQRGE+ARRSR
Sbjct:    6 VDQLRTSLAGALDGAAATQEDLAGGGTGRATARRRSRVQGLNGLDREMEASSPMMPLSSREGGGRGGARSGXXXXXDDDGGMGLGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESREEEIARLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEVREEASNRGKAEPMATPAELEVTRLQTLARTLEEDNARLSRRTAELENTASAHSSGKGKGEEGGWEEVGEGAHERARLEETLAATKKDLVKAAAAASEATADAETLRKRVASVQGEVARLQGEAAAKTERLEQLSREREELLERLKASAKDLESAEVEAASGAARERKAERQRGEDARRSR 369
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRI6_9PHAE)

HSP 1 Score: 108 bits (270), Expect = 3.330e-25
Identity = 59/65 (90.77%), Postives = 61/65 (93.85%), Query Frame = 1 
Query:    1 MSASGGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQR-EDQTAAD 192
            MSAS GVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQR  +QT A+
Sbjct:    1 MSASAGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQRVREQTDAE 65
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Uncharacterized (protein n=1 Tax=Halteria grandinella TaxID=5974 RepID=A0A8J8P5R0_HALGN)

HSP 1 Score: 83.2 bits (204), Expect = 5.190e-13
Identity = 84/329 (25.53%), Postives = 158/329 (48.02%), Query Frame = 1 
Query:    1 MSASGGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERSSLLLEKRAEAEREESRCLGAQKDLRISELEAQQVDQLRTSLAGALDGAAATQ-EDLAGGGAGRATARRRSRVQGLNGLDREMEVS---SPMLPLSSREGGGRGGVRSXXXXXXXXDGGMGMGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEKQVESREEEITRLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEARE 975
            M+ +  +  +KR    + RL AL Y  P T ES AL ERL  DL+ TTE ++ L++  ++  + ++       PLKKEN R++++NN LHL++I+  ED++ +  S     K++ A+  + + L  QKDL+I EL+ ++V +++  L  AL    + Q  D+  G        R+   Q  N + R+ E++    P+    ++         +             +  E+ +R  +  +  +  + +   +   +E     +E+ VE R+ EI RL +      N E V +A   +  +  +  L  Q +F+N++    E+++ E +E
Sbjct:    1 MATTLDIHAEKRFQTLKRRLDALHYSQPLTIESAALAERLLNDLLKTTEGFQKLKKINEELKSQVSNDTLYYEPLKKENERIVKENNDLHLQIIQLKEDSAASLSSLKTSAKQSLAQLTDLQFLSNQKDLKIGELD-KRVVEMQGKLERALSKVYSPQANDIVKG-------LRKEAGQEGNVIARKQEMTLSKGPLQHFDTQNSDPNLSRHTDTSPLFTTHAQQAVWAEELRRADERTQKFKQDIIQGESARKELERRLRDVERSVELRDAEIQRLSKLYQGGQNFEGVKIAFDKQTAEDQIQTLTRQCEFVNQENHRLESEMTEIKE 321
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: centrosomal (protein of 135 kDa-like isoform X1 n=3 Tax=Petromyzon marinus TaxID=7757 RepID=UPI001401DDFB)

HSP 1 Score: 81.3 bits (199), Expect = 2.000e-12
Identity = 112/387 (28.94%), Postives = 177/387 (45.74%), Query Frame = 1 
Query:   16 GVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERSSLLLEKRAEAEREESRCLGAQKDLRISELEAQ---QVDQLRTSLAGALDGAAATQEDLAGGGAGRATARRRSRVQGLNGLDREMEVSSPMLPLSSREGGGRGGVRSXXXXXXXXDGGMGMGPEDEQRLSDVVETLRARLEEASQSLSGMEEERAR-------LEKQVESREEEITRLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFL---NRQLANREAQLAEAREETSKRGKAEPMTTPAEL--EVTRLQTLARTLEK--DNARLSRRTAELETTASAN 1125
            G + +++    R RL  L Y  P   E+L LVE++F DLV TTES  + Q    +T  +       + P + ENARL+RDNN LH+++I+A E+     +      +R E E  + + L  Q   ++  LE +   + D++ T     +     T      GG  R+    R R+Q    +D  +  S    P  ++                         P D   + D+V+    RLEE  + +  +++E  R       L KQVE R+ EI RLGR        + V+L     +N++++  LN QV++L   NR L  R ++L+E RE + +   AE      EL  E+T +  LA+ +E+  D+  LS R  EL+T  S N
Sbjct:    2 GSAAERKFVSLRKRLDQLGYRQPLGVETLPLVEKIFGDLVHTTESLRNAQLAAGKTEKEARNVDTLVEPYRGENARLVRDNNALHMELIRAREECERIGKDLKGTIRRLEHENADLKFLNNQYVHKVRSLEKEGRAKSDRIATLQEKNMQAVVQTP-----GGKQRSIPFHRQRMQ----IDEMVPPSVLSAPPVAQ-------------------------PHDPY-VVDIVQLTSTRLEEQEREVQRLKDELERSELGLKTLRKQVEERDREIDRLGRTLSGGLPHDVVSLEAKNRSNEKLISHLNLQVEYLQQANRDLQERTSRLSE-REHSKECEAAELSVRNEELCRELTDIDALAQQMERERDSTLLSAR-RELDTAKSEN 351
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SEJ9_9ARCH)

HSP 1 Score: 75.1 bits (183), Expect = 2.290e-12
Identity = 41/71 (57.75%), Postives = 52/71 (73.24%), Query Frame = 1 
Query:   85 FTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAED 297
            F   SL LV+RLF DLV TT+SY  +Q RE + ++DL L ++QLFPL+KENARL R+N+ LHL  IK  ED
Sbjct:   31 FLYSSLDLVDRLFSDLVATTQSYHQVQDRESRLSSDLGLIQSQLFPLRKENARLARENHDLHLDNIKLNED 101
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Uncharacterized (protein n=4 Tax=Pomacea canaliculata TaxID=400727 RepID=A0A2T7PLX9_POMCA)

HSP 1 Score: 79.7 bits (195), Expect = 6.300e-12
Identity = 85/331 (25.68%), Postives = 156/331 (47.13%), Query Frame = 1 
Query:    1 MSASGGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERSSLLLEKRAEAEREESRCLGAQKDLRISELEAQQVDQLRTSLAGALDGAAATQEDLAGGGAGRATARRRSRVQGLNGLDREMEVSSPMLPLSSREGGGRGGVRSXXXXXXXXDGGMGMGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLEK-------QVESREEEITRLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEAR 972
            M+ +     Q++ ++ R RL  L Y  P   ESL LVE+LF DL+ TTES ++ +Q+  Q   +     + + P + +NARL+++NN LH++VIK  EDA    R      ++ E E  + + L  Q   ++ +LE +  ++    L        A  +    GG  +    RR R+        E++ + P     S                        + P ++  ++D+++   +++ +    +S +E+E+  +++       QVE+R+EEI RL +        + V+L     AN+R++  LN QVDFL ++  + E +L++ R
Sbjct:    1 MATTATAQAQQKFTNLRRRLDQLGYQQPLGIESLPLVEKLFADLIHTTESLKNAKQQLGQKQTESLDLESAVAPYRSDNARLIKENNDLHMQVIKQKEDADAVVRELKASLRKLEHENADLKFLNNQYVHKVRQLERESKEKSERILQLQEKNFQAVVQTP--GGRKKTIPFRRQRM--------EIDATVPDTYSGSS---------------------FRVPPPEDPYVADLLQVADSKIAQLEAEVSRIEDEKDIMDRKLKNFRQQVEARDEEIDRLTKMLDGGRPSDVVSLDAKNRANERMISHLNIQVDFLQQKNRDLERKLSDYR 300
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TZX6_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.040e-11
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1 
Query:   25 VQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKA 288
            + +RL   +++L  L Y D    +S+ LVE+LF+DLV T+ESYE LQ RED  + DLALS+ Q+ PL+K  ARL R+NN LH +V+ A
Sbjct:   33 LHRRLHVLQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHDLALSQDQILPLRKTIARLTRENNDLHSQVLHA 120
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D8X6_9STRA)

HSP 1 Score: 78.6 bits (192), Expect = 1.450e-11
Identity = 44/88 (50.00%), Postives = 61/88 (69.32%), Query Frame = 1 
Query:   25 VQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKA 288
            + +RL   +++L  L Y D    +S+ LVE+LF+DLV T+ESYE LQ RED  + DLALS+ Q+ PL+K  ARL R+NN LH +V+ A
Sbjct:   33 LHRRLHVLQSKLALLGYKDVVGTDSIELVEKLFDDLVATSESYERLQHREDLLSHDLALSQDQILPLRKTIARLTRENNDLHSQVLHA 120
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Match: CEP135 (n=2 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7IS38_BUGNE)

HSP 1 Score: 78.2 bits (191), Expect = 1.960e-11
Identity = 91/327 (27.83%), Postives = 147/327 (44.95%), Query Frame = 1 
Query:   25 VQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTESYEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDASGAERSSLLLEKRAEAEREESRCLGAQKDLRISELEAQQVDQLRTSLAGALDGAAATQEDLAGGGAGRATARRRSRVQGLNGLDREMEVSS----PMLPLSSREGGGRGGVRSXXXXXXXXDGGMGMGPEDEQRLSDVVETLRARLEEASQSLSGMEEERARLE-------KQVESREEEITRLGRQTGSDTNIEKVTLAHAYEANQRIVDQLNDQVDFLNRQLANREAQLAEAR 972
            VQ++ S+ R RL  L Y  P   ESL LVERLF DL+ TTES ++ +    ++  + A   AQ+ P K +N RL+++NN LH+++I+A E+A           ++ E E  + + L  Q   +I  +E Q  ++    L   L            GG  +    RR R+     LD  + VS     P +P                             P D+  ++D+++   +R+ E  Q L    +    LE       +QVE+R+ EI RLGR        + V L     +N++++  LN Q+D+L ++    E +L E+R
Sbjct:    6 VQEKFSNVRRRLDQLGYRQPLGIESLPLVERLFADLLHTTESLKNAKLSSAKSPREKADVDAQIEPYKNDNGRLVKENNDLHMQLIRAKEEADRKVAEYKAAVRKFEHENNDLKFLNNQYVHKIRAMERQSNEKSDHMLK--LQEKNFNAVIQTPGGKKKHVPFRRQRLL----LDSTLPVSETSTLPSIP-----------------------------PRDDPFVADLLKVADSRIAELEQQLELTRDRNVALEGKMSTYSRQVEARDAEIERLGRVLDGGRPYDVVALEAKNRSNEKLISHLNIQIDYLQQKNKELERKLGESR 297
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig751.15674.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Basal1.600e-27291.25body protein n=1 Tax=Ectocarpus siliculosus TaxID=... [more]
Uncharacterized2.350e-18090.38protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.330e-2590.77protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized5.190e-1325.53protein n=1 Tax=Halteria grandinella TaxID=5974 Re... [more]
centrosomal2.000e-1228.94protein of 135 kDa-like isoform X1 n=3 Tax=Petromy... [more]
Uncharacterized2.290e-1257.75protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A48... [more]
Uncharacterized6.300e-1225.68protein n=4 Tax=Pomacea canaliculata TaxID=400727 ... [more]
Uncharacterized1.040e-1150.00protein n=1 Tax=Nannochloropsis gaditana TaxID=725... [more]
Uncharacterized1.450e-1150.00protein n=1 Tax=Nannochloropsis salina CCMP1776 Ta... [more]
CEP1351.960e-1127.83n=2 Tax=Bugula neritina TaxID=10212 RepID=A0A7J7IS... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig751contigE_fasciculatus_S2_contig751:986..8421 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeMetazoa
Stop0
Start1
Seed ortholog score86.7
Seed ortholog evalue3.5e-14
Seed eggNOG ortholog7897.ENSLACP00000003524
Preferred namecep135
Model size1509
KEGG koko:K16461
Hectar predicted targeting categoryother localisation
Exons11
EggNOG free text desc.centriole-centriole cohesion
EggNOG OGs28KKT@1,2QT27@2759,39TRE@33154,3BAMT@33208,3CY2F@33213,48A3F@7711,48Y54@7742
Ec32 ortholog descriptionbasal body protein
Ec32 orthologEc-28_003160.1
Cds size1509
COG Functional cat.S
Best tax levelVertebrata
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig751.15674.1prot_E_fasciculatus_S2_contig751.15674.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig751 986..8421 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842412.7635674-CDS-E_fasciculatus_S2_contig751:985..11801696842412.7635674-CDS-E_fasciculatus_S2_contig751:985..1180Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 986..1180 -
1696842412.7767816-CDS-E_fasciculatus_S2_contig751:1708..18161696842412.7767816-CDS-E_fasciculatus_S2_contig751:1708..1816Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 1709..1816 -
1696842412.7902079-CDS-E_fasciculatus_S2_contig751:2184..23461696842412.7902079-CDS-E_fasciculatus_S2_contig751:2184..2346Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 2185..2346 -
1696842412.8042483-CDS-E_fasciculatus_S2_contig751:2718..27961696842412.8042483-CDS-E_fasciculatus_S2_contig751:2718..2796Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 2719..2796 -
1696842412.8166828-CDS-E_fasciculatus_S2_contig751:3317..34281696842412.8166828-CDS-E_fasciculatus_S2_contig751:3317..3428Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 3318..3428 -
1696842412.8290913-CDS-E_fasciculatus_S2_contig751:4077..42541696842412.8290913-CDS-E_fasciculatus_S2_contig751:4077..4254Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 4078..4254 -
1696842412.8403976-CDS-E_fasciculatus_S2_contig751:4875..49991696842412.8403976-CDS-E_fasciculatus_S2_contig751:4875..4999Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 4876..4999 -
1696842412.8517087-CDS-E_fasciculatus_S2_contig751:5348..54881696842412.8517087-CDS-E_fasciculatus_S2_contig751:5348..5488Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 5349..5488 -
1696842412.8630059-CDS-E_fasciculatus_S2_contig751:6186..63241696842412.8630059-CDS-E_fasciculatus_S2_contig751:6186..6324Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 6187..6324 -
1696842412.8741467-CDS-E_fasciculatus_S2_contig751:7035..71401696842412.8741467-CDS-E_fasciculatus_S2_contig751:7035..7140Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 7036..7140 -
1696842412.8904757-CDS-E_fasciculatus_S2_contig751:8250..84211696842412.8904757-CDS-E_fasciculatus_S2_contig751:8250..8421Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig751 8251..8421 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig751.15674.1

>prot_E_fasciculatus_S2_contig751.15674.1 ID=prot_E_fasciculatus_S2_contig751.15674.1|Name=mRNA_E_fasciculatus_S2_contig751.15674.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=503bp
MSASGGVSVQKRLSDQRARLLALDYHDPFTAESLALVERLFEDLVTTTES
YEDLQQREDQTAADLALSRAQLFPLKKENARLLRDNNLLHLKVIKAAEDA
SGAERSSLLLEKRAEAEREESRCLGAQKDLRISELEAQQVDQLRTSLAGA
LDGAAATQEDLAGGGAGRATARRRSRVQGLNGLDREMEVSSPMLPLSSRE
GGGRGGVRSSSGRRREDDGGMGMGPEDEQRLSDVVETLRARLEEASQSLS
GMEEERARLEKQVESREEEITRLGRQTGSDTNIEKVTLAHAYEANQRIVD
QLNDQVDFLNRQLANREAQLAEAREETSKRGKAEPMTTPAELEVTRLQTL
ARTLEKDNARLSRRTAELETTASANSSGKGEGEEDGWEVVGEGEHDRARL
EETLAETKQDLDKAAAAASEATADAETLRQRVASVQGEVARLQGEAETRT
ESLERLSREREELLERLKTSANDLESAEGEAASGVARERKAERQRGEEAR
RSR
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mRNA from alignment at E_fasciculatus_S2_contig751:986..8421-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig751.15674.1 ID=mRNA_E_fasciculatus_S2_contig751.15674.1|Name=mRNA_E_fasciculatus_S2_contig751.15674.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7436bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig751:986..8421- (Ectocarpus fasciculatus EfasUO2)
ATGAGCGCTTCTGGTGGAGTCAGCGTGCAGAAGAGGCTCTCTGACCAGAG
GGCCAGGCTGCTGGCTTTGGATTACCATGACCCCTTCACCGCCGAGTCGC
TCGCGTTGGTGGAACGACTGTTTGAGGATCTTGTCACCACTACTGAGAGC
TACGAAGACCTGCAACAGCGGGTGAGAGAGCACAGCGATGCAGAGAGCAC
GTTGTGCGGGAGGACCCACACCCATGTACGGTGCTGCTGGCGCCGGTGCT
ACGCACTGCCACACATGTAGCCTTTGGGATGTGGTGTGCCATGTTTCTTT
TTCTCTTGCCTCGGAAGCAACCGGGCGAAGGGTGCGCGGGTACTCTGTGC
TACAGCAGTACTGCTGCTTGTACTATTGCTCGCAACAAGGAATCACGCCG
CACCCTATTTAGCTCCTTTAGTCGCGCCTCACCAGATACGCCTTTTTCTG
TACGACTAAGCTATGGTCTGCTGCTGTACAGCGGTGCCGGCCCGCAGGTC
CTGGCGTCCGTTGGTGCTGCAATCATAGCGAGATGGACAGTAGGGGTGCC
TGTATTGCAGATGGTCGCATGGTTCGTTAACCTCGGTTGGTGTGTTTGTC
ATGGCCAAGCCATTCTTGGAGGATGTCTGGTGTACATTCTTAGTGTACGA
GTAACGTTTCGACCGACCAGTCGGCGGCAGCCCCACCCTCTCCTATCTGT
CGCTGGTGCCCATGATCCCCCTGCAGTTGCCCCCGAAACCAACCTTGGCT
GTGCCACGCGCATGTAGATATATCGCGTTACTGAAAACCATACATACATA
TTGTACGCCTACAGGGCGGAGGCGATCCAAGTATCCCGGGTAGGCAACAC
GGAGTACTTGCAACTGAAGTTGTTGGGTTGTGAGGTACCATATGTTTACC
GACACCAAATCCCGTGGTCTCGTTGTATGTAGACTATACCCATAGGAACA
GGTGGGACCTTTTGGGCTTGCTCGGACACAGGAAAATCAAACCTTTCCGA
AAGTTTCCCATCTGTATTCGTCAAAATGTCAGAGGGTACATCATCAGAGC
ATGTTGGGCGTTTTCGTTCTCTCGCGTTTGGTCCGTGTGTACTTCTAGCA
TGGTCTGCGGTGACGATGTGATTTACAGGAGTTTTTGTGTGCATCCGTGT
TTGTGTTTGCTGCCGCTGTTGCATCTTTTTTCTGTCTATGTGCCATCCTC
TCTCTGTATCGTATTGCACGAGTTTTGACGTCTTTTGGTTGTCGGCTTAC
ATACATCGTGCCTGCCAACGATGCTTCGCAGGAGGATCAGACGGCCGCCG
ACCTGGCCCTCAGCCGCGCACAGCTCTTCCCGCTCAAGAAGGAGAACGCT
CGCCTTCTACGGGACAACAACCTGCTGCACCTCAAGGTGCGGTGCCGTAA
CAGGGGGTCTCTCACCGCAGGCTTGTAGTCGTGTTTGCTGACGCTGCTGT
CGTTACTGCTTGGTCCGAACAACAAGTAAACGTAGAGTCCGACGTATTAT
TTTGTTGACCAATGGCTGCGAACGCGTATAGTATGTATACAATGTTTGTA
TTGTCTCATACCTCAGCGTGTGCAAGAAGCTCTTTTCCACCAGAGGGTGT
GCAGTAGTTCTCTGGGTGCCGTGTGGTGACGGCGACTGCAGCGTCCCGGC
TATGAACGCGTGTCGATTGTTGCCCGTGACCAACGGCTGGGAAGTTTATC
GTTTTCGGAAATTACACTGCGGCAGAGCGTACAAATTCGTCTCGCGAGTC
CCCTTGTTGGGGCTAATCGGTTGATGTCGTACCCGCTGGCCAGCCCTACC
ACGGCCTACGGTACCCCGATCATGCTTTCGCGCCCAAAGGGGGACGCAGT
TGCTTGGTACGATTCACCTTTAAACGGAAACCCTTTGTGCCTCTTTCGTT
TGTCTACCGACAAAACCTCCTCAGGTTTTCACCACGTATCGAAGACCCAG
CGTAGCACTAGCCCGCAACAAATTGAAACCGAAAGCTCTGCATAGCGTGG
ACAACAACGCCTCCCCCTTGCCTAGTTGTCCCTAATGGCAACACGCATCC
CTGCCCGTGCTCCATTGACATCCGACCAACCAAAATTTCCTCGATAGGTG
ATCAAAGCGGCGGAGGACGCAAGCGGGGCGGAGCGGTCCTCCTTGCTCCT
GGAGAAAAGGGCCGAGGCAGAGCGCGAGGAAAGCAGGTGCTTGGGAGCGC
AGAAAGATCTCAGGATCTCGGAGCTGGAAGCGCAGGTGCTTATCGCTGTC
AAGCATTGATGTGGATAGCAGGCATGATGCCTCTTTAGTGTTTGGGGTCT
AAGCTAGATTCCGCGTAGATCCGGGACTTGTATCATGGCTAGATGTAGAC
CCTTGTTTGGTCAGCGCGTGCGTAGACTCGGCAGGCTTGAGCAGCAGCGT
AAGACTCTCCCCATAGGCCGCAGTGCTACAGTGGCCACGTGTACTCGGTG
TGCGAAGCATGTGGCCTTCGTGAAAGGCATGGCGCTTTTCACGAGGCACG
TCGCTCTTGAAGCGTTCTTGCGTATGTGGGCGATCCCCTGACGAACAAGA
AAAAAAACACTGCAGTTTCTAGCCGGCATCTGGTGAAGTGACACTGGATA
GTAGTGGGGGGCCTACAGTGCACAACGCAGCCAACAAACGTGTCAGGCTT
CATGCATGACGACACTGCTACAGCAGTCCCGCTCACGATAACCGTCGGAA
AAATCGCGGCAATGTGCTGAGCTCTCTCCTCGATCAAAAGTTGCCCTTTT
TCATTTCCTTCTGGACTCGGTGCGGCTTTTGGTGTAATGTAGAGCCCCTT
CCTGTGGACGCGGCCATCTCATCCGTACTATTGTATTCAGTATCTTCTTG
TTCTTCCTCGCATGTCGGTTTTAGTACGAAATTCCCGCCAACGCTGTGTG
AATCGTTCACTCGCACACCAAATGTCAACCGAGCAGGTGGACCAACTTAG
GACCAGCTTGGCCGGAGCGCTAGACGGCGCTGCCGCGACCCAGGAAGACC
TTGCAGGCGGAGGCGCTGGGAGAGCTACGGCGAGGCGGCGTAGCCGTGTG
CAGGGTCTGAATGGGCTCGACAGGTGCGGCGGTGATGGTGGGTGGTAGTT
CTTGCCCTTCTTCTGATACTGTAGTAGTGAATAAGTTGTTGTTGATATGT
TTGTTGGTGTTGTTGTTGTTGTTGGTAGTGGTGGTGGTGGTATTGGCTGC
TGCTGCTGCTGCTGCTGCTGCTGCTGCAGTTTCTCGTGTCAATCAAGAGA
ACCCCGTCGTCGCGGAAACAGACGCGCTATCCCCTCGATGTCACTCCCTC
CCATTTCAAAGAGAGGAGACGAGGTTCGCTAGCGGCACCCAGAATGTGCG
TGGCTCTGTCGGGGCGGTTTCACGTGTTCTGGGACTGAAACTATTACGCT
GTGATTCTTCCCCGTAACTCAGGGAGATGGAGGTGTCCAGTCCGATGCTG
CCTCTGTCGTCTCGTGAGGGAGGGGGGCGAGGAGGGGTGAGGAGCAGCAG
CGGGAGGAGGCGTGAAGACGACGGCGGGATGGGGATGGGGCCTGAGGTAG
GGCTGTTGCGTTAGGGTAGAGGGGTATACGCGAAATGAAGTGGGTCGTGA
TCCCGCTGGGGGGTCACGTTCCACATGGCAGGACCAAGTTTAGTCCCGGC
CAAGAGAGCACGCGGGGAACGGGCCTGCTATTTTTGGCGAACGGTGCGAG
AGTGTGAATATTGGGTGCATTGTCAGGTTGAAACGAACGAGGGGGTGATT
TCTGAGGGTGGGACAGGAGGTAGGTACAGTACAGTTTGGGTATCATCTCC
GTCGCCTGAGGAAGAAATCAAGCTTTGCTGGCCTTGATGTTGGGCTGGAA
GCACCGTTGGCAGGATGGAGATGTCCTAGAAGCCGTGGTCCGTGCCAGGG
TGATCGATCGCGTGAGCGTCAGACTGTACGGGACCGTGGCAAGGTGCTCC
CCGTATGTGGCTAGCGAGACACCAGTAAAAAAATGAGGACCGAGCGCCCC
CACCCGTTAGCTTCAGTCCCGACAGAAATTTACCAACGGCGTTGCTGTAG
CCGTGGATCGAGAGATCGACCTGCTGCAACGTTCGGGTTTTTCGAAGACC
CATTCACCCATCCACCCTTCACCCAACCACCCTTCGTCTTTCTGTGTTGG
ACAACGGATCCGTTCAGGACGAACAACGCCTGTCGGACGTAGTGGAGACC
CTTCGAGCGAGGCTGGAGGAGGCGTCTCAGTCTCTGTCGGGCATGGAAGA
GGAGAGGGCGCGGCTGGAGAAACAGGTCGAGTCCCGGGAAGAAGAGATAA
CCCGCCTCGGCAGGCAGACCGGCAGCGACACCAACATCGAGAAGGTACTC
GGAAATATTTATTAAACACATGGACATTGGACCGCGTTACATACACATGG
ACCGCTTTCGTCGTTTCATTTTAAATCCGGGGAGTAACCCGAGAGTGGTG
ATGTTACCGAGCTCGAAAGGGTAGTGCTCACTTGTGGGTCTCTCGGATGA
CGCCACCCTCCTGAGTGTTTGTTCGGCAAGCGCTGGCACCGCGAAACGAA
GTGTTTTTCTGAGGGGTGTACATGATTCTACAATGTACCATCTATCTCAT
TTTCGATTTGACCGGTTTGTCTTAGAGCTGTTCAAAGTCGAGAAGAGAGA
AGGGACGCGTTGCTCCGCATGCTGTGAGAATTTATTTCCCATCACCGTTG
GCTAAGATGCCCGAGACAAGCCTTATAATGGGTATGTACGTCTCCCCCGA
AAGCACTGTCTGTCTTGAAGTGCATTTGTGGCCATTGGTGGATCGAATAG
GGAACACCAAGGGAGTGAGTTTTTCCCCTATTCCTTCCGATTCGCGGAAC
TCCGCATTGGCGTGCTCCGTCCCGGCTCAGTCCGTTTCGAGGAGCTACAG
CCAAACGCTCCTTATACTTTCACTCACCCCCACGCCCAATGCTGAACACC
ACGCACGATCGTGCTCCATGGCACCTTGCGTGGTGTATCACAGGTGACGC
TGGCGCACGCTTACGAAGCGAACCAGCGCATCGTGGACCAGCTCAACGAC
CAGGTCGATTTCTTGAACAGGCAGCTGGCCAACAGGGAAGCCCAGCTGGC
TGAGGTGGGTCAGAAACGAAAAAGGTAGATGGAATAAAATTACACGAGTG
AAATACGAAGACGTTTTTGTTTCCGAATGAGTTCCCGACGTCCGCACCTG
CTCCGTCCTCTCGAGGACGCGTGTTCAATGGTCTAAGAACTAAAGCATGC
CAAACATGTTTACGCTCCCGGCCGTAGGGTGGGCGTCGCGCTTGGTCCCA
GTAACCGAACGCTTTGCGTGCAGGGGGGTTGCGACGACGTGAAACAAGAG
AGGCAACAGGGTTGACCATGGGCTGGTTCCTGTCTTTGTGCAATAGAGCG
TAGGAAAAATGCTCGCACAAAGCCCGAAAAAAGGCGTCCAGGGTTAAAAC
TGCAGTTATTTATCTTCTTGGCGTTCTTCAGCTGCTTACTTACACACACC
GCGTGCTCGGCGAGCGGCTAACCCACTTGCCCTTCCTGATCCTTTCGAGG
GACTCCATGCAACAATCTGTGTGTTTCGCGCAGAGAAGTATACACGCTCT
CTTCCCCTCGGTTTCTGTCGGACAGGCCCGAGAAGAGACGTCTAAAAGGG
GGAAGGCGGAGCCAATGACGACGCCGGCCGAGCTGGAAGTGACTCGTCTG
CAGGTGAACCATATCTGCCGCTGTCGTATGGTCTCTCTGTCTGTCTCTCT
GTCTCTCTGTCTCTCTGTCTGTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTTTCTGCGGCT
GCTGATGTATGCGCTCTGTCGCTACCAGTTCTTCCGTCCGTCTAAATGTC
TAATGCACGCGCACGGCGAGGTTTCAACTACGACACAGCAGTAGGCAGGG
AAGTGATTGTATCGTCCCCATACATCCGCCTTGGGTTTGTTCCGCGACGT
CTGCCCCCGCATCTAGGGCAACTACTCCTGACGTGCAGTCCTTGCGTTTG
TCCTCGTCGTGTTTGGTTGCGATAGACCCTTGCCCGTACGCTTGAGAAAG
ACAACGCTCGTCTTTCGAGGCGGACCGCAGAACTCGAGACGACAGCCTCC
GCCAACAGCTCCGGGAAGGGTGAGGGGGAGGAGGATGGCTGGGAGGTGGT
CGGAGAGGGAGAGCACGACCGGGCACGACTCGAAGAGGTGAACTTTGGTT
TTAGTCACAGGTCCATTTATCGAAAGCTCATGTCCCAAGGTCGTTAAGCT
TGGTCTTGTTTGACGACGAAGCTCGAAACCCACCGCGACATCGAGGAGGG
TTGTCTCGCGTCTTTTTTTGCTCTTTCGTGGAGTGAAATTGGTCTAGGAA
GAGCCTTGTCTCGAGTTTTTGCTTTTGTGTGGAGTGAAATACCGCCTGCT
TGCTCGTTCTATGCAGCTGCGAACATCTCGCCCATGCGGGCAACATCGAG
ACTGCACCAGACCGCCCCGGCTGCACCCCCTCATATCCACCCTGCAACAC
AGACTATTCATTCTCAACGCGACTTTCCTGTGTTTGTCACGCCGATGCCC
CGAAGACCTTAGCCGAGACGAAGCAGGACTTGGATAAGGCAGCCGCGGCA
GCAAGCGAGGCGACGGCCGACGCTGAGACTCTTCGGCAACGCGTGGCGTC
CGTCCAAGGCGAGGTGCGAAACCGCTGCGATTTTTATCCTTCTGCGACCA
GGTGTTTTGGGACAGATAGGAGGAGCGTTGGGTTATGCGATGCCGTAAAT
TTCACTATTTTGGCTCTGCTGCAATCATGAGGCAGAAAAGAGCTGTTTTG
TAGCCTTCCGTATATTTTCACTATCTTGCTAATGTCCAGTGTCTCTCTAA
GTGGGTCACTTGTTGTTGAGATTTCGCTTGCCTCTAATAGGACGGACTCG
AGAATGCCTTTCCGAAAACCACCTTCTTCAAAGCAGCCAAAACAATGGTT
GTCAGCTCAATAATCCCCCAAATGTATGGGCTCTGAATCCAACTGGCGCA
GAGTGAAAATACGGAGCTGGGTCATGATAGAGTGACATCATGCTTCACTC
CCGCCGCAGCGCATGGTGGTGTACCTCATGCCGGAGATTGGTTTCGTCGA
CGTGACGTGCTCTCCAACCACTGTCCGCAACAGCAAGAAGAATTCATTAG
CTAAGATTCACTAATTTCGTCGCCTCTTGTGCTTGCCTTAGGTTGCCCGG
CTGCAGGGGGAAGCGGAAACCAGGACGGAGAGCCTGGAACGGCTGTCACG
AGAGCGTGAGGAACTGCTGGAGAGGCTCAAGACTTCCGCGAACGATCTAG
AGAGCGCGGAGGGCGAGGCTGCCAGCGGAGTCGCAAGAGAAAGGAAGGCG
GAGAGGCAGCGGGGAGAGGAAGCTCGAAGAAGCAGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig751:986..8421-

>mRNA_E_fasciculatus_S2_contig751.15674.1 ID=mRNA_E_fasciculatus_S2_contig751.15674.1|Name=mRNA_E_fasciculatus_S2_contig751.15674.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1509bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig751:986..8421- (Ectocarpus fasciculatus EfasUO2)
ATGAGCGCTTCTGGTGGAGTCAGCGTGCAGAAGAGGCTCTCTGACCAGAG
GGCCAGGCTGCTGGCTTTGGATTACCATGACCCCTTCACCGCCGAGTCGC
TCGCGTTGGTGGAACGACTGTTTGAGGATCTTGTCACCACTACTGAGAGC
TACGAAGACCTGCAACAGCGGGAGGATCAGACGGCCGCCGACCTGGCCCT
CAGCCGCGCACAGCTCTTCCCGCTCAAGAAGGAGAACGCTCGCCTTCTAC
GGGACAACAACCTGCTGCACCTCAAGGTGATCAAAGCGGCGGAGGACGCA
AGCGGGGCGGAGCGGTCCTCCTTGCTCCTGGAGAAAAGGGCCGAGGCAGA
GCGCGAGGAAAGCAGGTGCTTGGGAGCGCAGAAAGATCTCAGGATCTCGG
AGCTGGAAGCGCAGCAGGTGGACCAACTTAGGACCAGCTTGGCCGGAGCG
CTAGACGGCGCTGCCGCGACCCAGGAAGACCTTGCAGGCGGAGGCGCTGG
GAGAGCTACGGCGAGGCGGCGTAGCCGTGTGCAGGGTCTGAATGGGCTCG
ACAGGGAGATGGAGGTGTCCAGTCCGATGCTGCCTCTGTCGTCTCGTGAG
GGAGGGGGGCGAGGAGGGGTGAGGAGCAGCAGCGGGAGGAGGCGTGAAGA
CGACGGCGGGATGGGGATGGGGCCTGAGGACGAACAACGCCTGTCGGACG
TAGTGGAGACCCTTCGAGCGAGGCTGGAGGAGGCGTCTCAGTCTCTGTCG
GGCATGGAAGAGGAGAGGGCGCGGCTGGAGAAACAGGTCGAGTCCCGGGA
AGAAGAGATAACCCGCCTCGGCAGGCAGACCGGCAGCGACACCAACATCG
AGAAGGTGACGCTGGCGCACGCTTACGAAGCGAACCAGCGCATCGTGGAC
CAGCTCAACGACCAGGTCGATTTCTTGAACAGGCAGCTGGCCAACAGGGA
AGCCCAGCTGGCTGAGGCCCGAGAAGAGACGTCTAAAAGGGGGAAGGCGG
AGCCAATGACGACGCCGGCCGAGCTGGAAGTGACTCGTCTGCAGACCCTT
GCCCGTACGCTTGAGAAAGACAACGCTCGTCTTTCGAGGCGGACCGCAGA
ACTCGAGACGACAGCCTCCGCCAACAGCTCCGGGAAGGGTGAGGGGGAGG
AGGATGGCTGGGAGGTGGTCGGAGAGGGAGAGCACGACCGGGCACGACTC
GAAGAGACCTTAGCCGAGACGAAGCAGGACTTGGATAAGGCAGCCGCGGC
AGCAAGCGAGGCGACGGCCGACGCTGAGACTCTTCGGCAACGCGTGGCGT
CCGTCCAAGGCGAGGTTGCCCGGCTGCAGGGGGAAGCGGAAACCAGGACG
GAGAGCCTGGAACGGCTGTCACGAGAGCGTGAGGAACTGCTGGAGAGGCT
CAAGACTTCCGCGAACGATCTAGAGAGCGCGGAGGGCGAGGCTGCCAGCG
GAGTCGCAAGAGAAAGGAAGGCGGAGAGGCAGCGGGGAGAGGAAGCTCGA
AGAAGCAGG
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