mRNA_E_fasciculatus_S2_contig7501.15667.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAK7_9PHAE) HSP 1 Score: 124 bits (312), Expect = 1.320e-32 Identity = 59/69 (85.51%), Postives = 64/69 (92.75%), Query Frame = 2
Query: 71 EQQQLEERRRNAGLVWSFVGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFKT 277
+ Q++EERRRNA L+WSFVGGSFAGLCQAV+IIPTDIIKIKLQIQVGAPGSSNL YRGPVDCAM IF T
Sbjct: 133 QSQRVEERRRNAELLWSFVGGSFAGLCQAVIIIPTDIIKIKLQIQVGAPGSSNLKYRGPVDCAMSIFNT 201
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Mitochondrial (carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z6G9_9STRA) HSP 1 Score: 65.9 bits (159), Expect = 8.880e-11 Identity = 29/53 (54.72%), Postives = 40/53 (75.47%), Query Frame = 2
Query: 119 SFVGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFKT 277
+F GS AG CQ VV++P+D IK KLQ+QVG+ SS L Y+GP+DCA ++ +T
Sbjct: 105 TFAAGSCAGACQTVVLLPSDNIKTKLQVQVGSLHSSQLRYKGPLDCARQLVRT 157
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Solute (carrier family 25 member 45-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAK8_9STRA) HSP 1 Score: 58.9 bits (141), Expect = 3.030e-8 Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 2
Query: 122 FVGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFKT 277
FV G+FAG CQ VV++PT+ IK KLQ+ A + L Y+G +DCA ++ +T
Sbjct: 98 FVAGAFAGACQTVVVLPTENIKTKLQVNTYARSTLKLQYKGAIDCATQLVRT 149
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Hypothetical (protein n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3LS03_9STRA) HSP 1 Score: 58.2 bits (139), Expect = 6.800e-8 Identity = 24/55 (43.64%), Postives = 37/55 (67.27%), Query Frame = 2
Query: 113 VWSFV-GGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFK 274
+W ++ G AG+C A V+ P ++IK +LQ+Q A G +LY+GP+DC +KI K
Sbjct: 129 MWKYIISGGTAGICVAFVLTPVELIKCRLQVQNAATGEGAILYKGPLDCLLKIVK 183
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: mitochondrial (basic amino acids transporter-like n=1 Tax=Exaiptasia diaphana TaxID=2652724 RepID=UPI000A2A88FE) HSP 1 Score: 56.2 bits (134), Expect = 3.080e-7 Identity = 25/50 (50.00%), Postives = 36/50 (72.00%), Query Frame = 2
Query: 125 VGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFK 274
V GS AGL Q ++I+P D++KIKLQ+Q A +L Y+GP+DC KI++
Sbjct: 102 VAGSVAGLAQCLIIVPLDLVKIKLQMQTEAKRKQSL-YKGPIDCIKKIYQ 150
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Uncharacterized (protein n=1 Tax=Capitella teleta TaxID=283909 RepID=R7UEY9_CAPTE) HSP 1 Score: 52.8 bits (125), Expect = 5.620e-6 Identity = 30/75 (40.00%), Postives = 43/75 (57.33%), Query Frame = 2
Query: 74 QQQLEERRRNA-GLVWSFVGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNL------LYRGPVDCAMKIFKT 277
Q+ ++ R N L F+ GS AGL Q+V+ P ++ K ++QIQ G+S LY+GPVDC KI+KT
Sbjct: 80 QRNVQRRMENPQSLTSHFIAGSVAGLAQSVICSPMELAKTRMQIQ--GQGASRKKYRQVSLYKGPVDCLCKIYKT 152
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Solute (carrier family 25 member 45 n=3 Tax=Esox lucius TaxID=8010 RepID=A0A3P9A881_ESOLU) HSP 1 Score: 51.6 bits (122), Expect = 1.380e-5 Identity = 21/51 (41.18%), Postives = 30/51 (58.82%), Query Frame = 2
Query: 122 FVGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFK 274
F G F+GL Q ++ P D++K++LQ Q+G PG YRGP C I +
Sbjct: 104 FAAGCFSGLVQVALMAPVDLVKVRLQSQMGRPGIGGDQYRGPAHCVTLILR 154
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: mitochondrial (carnitine/acylcarnitine carrier protein-like n=1 Tax=Styela clava TaxID=7725 RepID=UPI00193A87D4) HSP 1 Score: 51.2 bits (121), Expect = 1.920e-5 Identity = 28/77 (36.36%), Postives = 41/77 (53.25%), Query Frame = 2
Query: 47 GGGVSMSMEQQQLEERRRNAGLVWSFVGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFKT 277
G GV + + ++ L FV G AG+ V++ P + IK LQIQ GS + Y+GPVDCA K+++T
Sbjct: 88 GFGVGKDLVRSVTGDQSEKLSLSKLFVSGGVAGVLTTVIMAPGERIKCLLQIQ---QGSGEIKYKGPVDCAKKLYQT 161
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Mitochondrial (2-oxodicarboxylate carrier 2 n=2 Tax=Candida glabrata TaxID=5478 RepID=A0A0W0CEP4_CANGB) HSP 1 Score: 51.2 bits (121), Expect = 1.930e-5 Identity = 20/54 (37.04%), Postives = 36/54 (66.67%), Query Frame = 2
Query: 113 VWSFVGGSFAGLCQAVVIIPTDIIKIKLQIQVGAPGSSNLLYRGPVDCAMKIFK 274
++ FV G+ AG+ + +V+ P D++K ++Q+QVG+ S + Y G +DC +I K
Sbjct: 9 IYQFVSGAAAGVSELLVMYPLDVVKTRMQLQVGSGTGSGVAYNGVIDCLGQIVK 62
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UV79_HETAK) HSP 1 Score: 51.2 bits (121), Expect = 2.040e-5 Identity = 24/52 (46.15%), Postives = 34/52 (65.38%), Query Frame = 2
Query: 122 FVGGSFAGLCQAVVIIPTDIIKIKLQIQVG-APGSSNLLYRGPVDCAMKIFK 274
F+ G +G QAV + PT +IK+KLQ+Q G A ++Y GPVDC +KI +
Sbjct: 163 FLAGVLSGALQAVAMSPTQLIKVKLQVQTGQAARPGQVVYYGPVDCLVKIMQ 214 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7501.15667.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7501.15667.1 >prot_E_fasciculatus_S2_contig7501.15667.1 ID=prot_E_fasciculatus_S2_contig7501.15667.1|Name=mRNA_E_fasciculatus_S2_contig7501.15667.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=93bp QQRSGEGRRWYRSTSRGGRVDVYGAAAAGREEEKRRAGVELRGRVLRGTVback to top mRNA from alignment at E_fasciculatus_S2_contig7501:542..1426- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7501.15667.1 ID=mRNA_E_fasciculatus_S2_contig7501.15667.1|Name=mRNA_E_fasciculatus_S2_contig7501.15667.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=885bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7501:542..1426- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7501:542..1426- >mRNA_E_fasciculatus_S2_contig7501.15667.1 ID=mRNA_E_fasciculatus_S2_contig7501.15667.1|Name=mRNA_E_fasciculatus_S2_contig7501.15667.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=279bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7501:542..1426- (Ectocarpus fasciculatus EfasUO2)back to top |