prot_E_fasciculatus_S2_contig7497.15659.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7497.15659.1
Unique Nameprot_E_fasciculatus_S2_contig7497.15659.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length197
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7497.15659.1 vs. uniprot
Match: A0A6H5JQQ1_9PHAE (R3H domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQQ1_9PHAE)

HSP 1 Score: 110 bits (276), Expect = 2.260e-25
Identity = 93/195 (47.69%), Postives = 110/195 (56.41%), Query Frame = 0 
Query:    3 GSLTGRMDQTHKGVAGTAAGIARLRGQDQEITRRVSNFEAEVPGKADGFDEPRSPSATSRRGSYDPDTV-SVASSTAIPPKTLMTSPQERRKSWAIHVWCCTRSVASHQKGGPRWTPRPTFGLSRNTLSSASSLSAAPMPALGGSADGCTKASGNGGGXXXNVGGADLVRIGTAVRVRRTVQDTEEESRKRCRRC 196
            GSL G MDQTHK VAGTAA     R QDQ I +RVSNFEAEV  K   F    +P A S    +   ++ S+  S A     + T  +       + ++         +    +   +   GL+RNTLSSASS SAAPMPALGGSA G          XXX+VG ADLVRIGT V+ RRTVQD EEESRKR RRC
Sbjct:  216 GSLMGSMDQTHKSVAGTAAVDRANRAQDQAIKQRVSNFEAEVREKIAVFST--NPEAISHTFPHVEKSLRSIQHSLAEDFDGITTRTEGELDDRRVVLYKLGYEPPEEEV---QVDTQVHLGLARNTLSSASSASAAPMPALGGSAGGXXXXX-----XXXDVGSADLVRIGTVVKDRRTVQDIEEESRKRRRRC 400
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BLAST of mRNA_E_fasciculatus_S2_contig7497.15659.1 vs. uniprot
Match: D7G2L0_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2L0_ECTSI)

HSP 1 Score: 81.3 bits (199), Expect = 6.330e-16
Identity = 75/171 (43.86%), Postives = 93/171 (54.39%), Query Frame = 0 
Query:   27 RGQDQEITRRVSNFEAEVPGKADGFDEPRSPSATSRRGSYDPDTV-SVASSTAIPPKTLMTSPQERRKSWAIHVWCCTRSVASHQKGGPRWTPRPTFGLSRNTLSSASSLSAAPMPALGGSADGCTKASGNGGGXXXNVGGADLVRIGTAVRVRRTVQDTEEESRKRCRRC 196
            R QDQ I +RVSNFEAEV  K   F    +P A S    +   ++ S+  S A     + T  +       + ++         +    +   +   GL+RNTLSSASS+SAAPMPALGGSA            XXX+VG ADLVRIGT V+ RRTVQD EEESRKR R C
Sbjct:    9 RAQDQAIKQRVSNFEAEVREKIAVFST--NPEAISHTFPHVEKSLRSIQHSLAEDFDGITTRTEGELDDRRVVLYKLGYEPPEEEV---QVDAQVHIGLARNTLSSASSVSAAPMPALGGSAGXXXXXX-----XXXDVGSADLVRIGTVVKDRRTVQDIEEESRKRRRHC 169
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7497.15659.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5JQQ1_9PHAE2.260e-2547.69R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
D7G2L0_ECTSI6.330e-1643.86R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7497contigE_fasciculatus_S2_contig7497:2303..5048 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7497.15659.1mRNA_E_fasciculatus_S2_contig7497.15659.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7497 2272..5714 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7497.15659.1 ID=prot_E_fasciculatus_S2_contig7497.15659.1|Name=mRNA_E_fasciculatus_S2_contig7497.15659.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=197bp
MEGSLTGRMDQTHKGVAGTAAGIARLRGQDQEITRRVSNFEAEVPGKADG
FDEPRSPSATSRRGSYDPDTVSVASSTAIPPKTLMTSPQERRKSWAIHVW
CCTRSVASHQKGGPRWTPRPTFGLSRNTLSSASSLSAAPMPALGGSADGC
TKASGNGGGNGGNVGGADLVRIGTAVRVRRTVQDTEEESRKRCRRC*
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