mRNA_E_fasciculatus_S2_contig7490.15655.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7490.15655.1
Unique NamemRNA_E_fasciculatus_S2_contig7490.15655.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G890_ECTSI)

HSP 1 Score: 303 bits (776), Expect = 7.030e-97
Identity = 159/188 (84.57%), Postives = 173/188 (92.02%), Query Frame = 1
Query:    1 MADVAVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLLEALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG 564
            MADVAV+VL   A+IRD AK+IKENDRQACRL+ERVKA+EPAVLAVKQGT  SS ESLRQLL TVEMIRNFL GYARMSNFNRALKRKSNASEFTQFG+ + EGVQALSLD+AVDAWAKEDAADRL DLENMVD MERMERNRTENHA+ILG+L+ALRKDER ELT WDEID+DKDLDF+GS+RLGSG
Sbjct:    1 MADVAVIVLGVMAQIRDFAKDIKENDRQACRLIERVKAIEPAVLAVKQGTNMSSSESLRQLLGTVEMIRNFLGGYARMSNFNRALKRKSNASEFTQFGIHINEGVQALSLDIAVDAWAKEDAADRLDDLENMVDTMERMERNRTENHAEILGVLKALRKDERLELTEWDEIDYDKDLDFKGSSRLGSG 188          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Protein (kinase, TKL group n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G887_ECTSI)

HSP 1 Score: 291 bits (745), Expect = 7.400e-96
Identity = 158/202 (78.22%), Postives = 174/202 (86.14%), Query Frame = 1
Query:    1 MADVAVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLL--------------EALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG 564
            MADVAV+VL   A+IRDI K+IKENDRQACRL+ERVKA++PAVLAVKQGT TSS +SL QLLATV+MIRNFLEGYA+MS FNRALKRK+NASEFTQFGVLLTEGVQ LSLDVAVDAWAKEDAADRL DLENMVDIMERMERNRTEN A+ILG+L              +ALRKDERSELT WDEID+DKDLDF+GS+R G G
Sbjct:    1 MADVAVIVLGVMAQIRDIVKDIKENDRQACRLIERVKAIQPAVLAVKQGTNTSSSDSLSQLLATVDMIRNFLEGYAQMSKFNRALKRKANASEFTQFGVLLTEGVQTLSLDVAVDAWAKEDAADRLDDLENMVDIMERMERNRTENQAEILGVLKCEHHADWLHVRTFQALRKDERSELTEWDEIDYDKDLDFKGSSRSGRG 202          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K368_9PHAE)

HSP 1 Score: 244 bits (622), Expect = 1.520e-78
Identity = 130/188 (69.15%), Postives = 157/188 (83.51%), Query Frame = 1
Query:    1 MADVAVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLLEALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG 564
            MADVAV++L    EIR +A+  +ENDRQA  L +RV AV+P VLAV++GTK SS E+LRQLLATVE IRNFL GYA+ S FNRALKRK+NA +FTQ G +LTE VQAL LDVAVDAWAKEDA+DRL DL+NMVD MERMER+RT+NHA+++ +L+ALR DER+ELT W EID+ +DLDFEGST LG+G
Sbjct:   15 MADVAVVILHVVDEIRKVAEGTRENDRQA--LFKRVLAVQPPVLAVREGTKLSSSEALRQLLATVEKIRNFLGGYAQTSKFNRALKRKANADQFTQLGDILTEEVQALQLDVAVDAWAKEDASDRLADLDNMVDTMERMERSRTDNHAEVMSVLQALRNDERAELTGWVEIDYSEDLDFEGSTILGAG 200          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Protein (kinase domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JLJ5_9PHAE)

HSP 1 Score: 255 bits (652), Expect = 9.200e-78
Identity = 133/188 (70.74%), Postives = 159/188 (84.57%), Query Frame = 1
Query:    1 MADVAVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLLEALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG 564
            MADVAV VLR   EIR++A+ IKENDRQA RL +RV A+EP V+AVK+G+K SS ESL +LL  VE IRNFLEGYAR +NFNRALKRK+NA  F +  V+LTEG+QAL LD+AVDAWA EDA+DRL DLENM+DIMERME NRT+NHA+++G+L+ALR+DER+ELT W EID+DKDLDF GST LGSG
Sbjct:    1 MADVAVAVLRVVTEIRNVAERIKENDRQARRLSDRVTAIEPPVIAVKKGSKMSSSESLHRLLFAVEEIRNFLEGYARTTNFNRALKRKANADSFAKLSVMLTEGMQALQLDIAVDAWATEDASDRLDDLENMMDIMERMESNRTDNHAEVMGVLKALRQDERTELTGWVEIDYDKDLDFGGSTLLGSG 188          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Kinesin (light chain-like protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQ15_ECTSI)

HSP 1 Score: 246 bits (628), Expect = 2.030e-73
Identity = 132/188 (70.21%), Postives = 153/188 (81.38%), Query Frame = 1
Query:    1 MADVAVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLLEALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG 564
            M DVAV++LR  AEI D+A+ I EN RQA RLL+R  A+E  VLAV  GT  SS ESLRQL ATVE IRNFLEGYAR +  NRALKRKSNA++FTQ GV LTEG+ AL LDVAVDAWA EDA+DRL DLENMVD+ME MERNRTENHA+++ +L+ LR DERSELT W EID+++DLDF+GST LGSG
Sbjct:    1 MVDVAVVILRVVAEIHDVAEGINENHRQARRLLKRAMAIETPVLAVHNGTILSSSESLRQLSATVENIRNFLEGYARTTKLNRALKRKSNAAKFTQLGVNLTEGMHALQLDVAVDAWANEDASDRLEDLENMVDMMEIMERNRTENHAEVMDVLKTLRNDERSELTGWIEIDYEQDLDFDGSTLLGSG 188          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JY67_9PHAE)

HSP 1 Score: 238 bits (606), Expect = 2.180e-69
Identity = 121/188 (64.36%), Postives = 155/188 (82.45%), Query Frame = 1
Query:    1 MADVAVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLLEALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG 564
            M DVAV+VLR  AE+RD+A+++ ENDRQACRLL+R  A+E  VLAV+ GT  +S +SLRQLL TVE IRNFLE YARM+ FNRAL R+SNA+EF + G+ LTEG+QAL L+VAVD WAKEDA+DR  D+ENM+D+ME ++RN+T+ HA+++ +L+ALRKDERSEL  W EID++KDLDF+GS  LG G
Sbjct:    1 MVDVAVVVLRVLAEVRDVAEDVMENDRQACRLLKRALAIEAPVLAVQNGTSLTSADSLRQLLTTVEKIRNFLEEYARMTKFNRALNRRSNAAEFMRLGLNLTEGMQALHLEVAVDVWAKEDASDRQEDIENMLDMMETVKRNQTDKHAEVMNVLKALRKDERSELAGWIEIDYEKDLDFDGSALLGWG 188          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KS20_9PHAE)

HSP 1 Score: 193 bits (490), Expect = 5.240e-54
Identity = 108/187 (57.75%), Postives = 131/187 (70.05%), Query Frame = 1
Query:   13 AVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLLEALRKDERSEL---TAWDEIDFDKDLDFEGSTRLGSG 564
            A+ +L+  AEIR +A+ I+END QA RL ERVKA++P VLAVK G +  SPESLRQL   +E IRNFL GYAR +  NR  +R+SNAS F  F   L+EG+QAL +DV VD WAK+D +DRL D+ N+     R ERNR +N A+    L  L KDERSEL   +AW EIDFD DLDFEGS RLGSG
Sbjct:   61 AITILQVLAEIRGVAEGIQENDEQAHRLSERVKAIQPGVLAVKNGKRGVSPESLRQLFEALEAIRNFLHGYARSNFLNRIWRRRSNASRFRVFSHDLSEGMQALQMDVLVDVWAKQDVSDRLEDIANLKHEARRGERNRNDNRAEFSRALAELEKDERSELKELSAWVEIDFDNDLDFEGSIRLGSG 247          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGQ4_9PHAE)

HSP 1 Score: 190 bits (483), Expect = 5.960e-54
Identity = 108/187 (57.75%), Postives = 131/187 (70.05%), Query Frame = 1
Query:   13 AVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQILGLLEALRKDERSEL---TAWDEIDFDKDLDFEGSTRLGSG 564
            A+ VL+  AEIR +A+ I+END QA RL ERVKA++P VLAVK G +  SPESLRQL   +E IRNFL GYAR +  NR  +R+SNAS F  F   LTEG+QAL +DV VD WAK+D +DRL D+ N+   M   ERN + N A+    L  L KDERSEL   +AW+EID+D DLDFEGS RLGSG
Sbjct:    8 AITVLQVVAEIRGVAEGIQENDEQAHRLSERVKAIQPGVLAVKNGKRGVSPESLRQLFEALEAIRNFLHGYARSNFLNRVWRRRSNASRFRAFSHDLTEGMQALQMDVLVDVWAKQDVSDRLEDIANLKHAMRIGERN-SNNRAEFSRALTELEKDERSELKELSAWEEIDYDNDLDFEGSIRLGSG 193          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: Protein (kinase domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHK4_ECTSI)

HSP 1 Score: 96.3 bits (238), Expect = 2.220e-21
Identity = 48/57 (84.21%), Postives = 52/57 (91.23%), Query Frame = 1
Query:  394 MVDIMERMERNRTENHAQILGLLEALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG 564
            MVDIMERME NRTENHA+ L +L+ALR DERSELTAWDEID+DKDLDFEGSTR GSG
Sbjct:    1 MVDIMERMEHNRTENHAETLRVLKALRNDERSELTAWDEIDYDKDLDFEGSTRFGSG 57          
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Match: PK_Tyr_Ser-Thr (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2T5_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 4.190e-15
Identity = 50/92 (54.35%), Postives = 60/92 (65.22%), Query Frame = 1
Query:  130 LAVKQGTKTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVLLTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDI 405
            +A   GTKTSS E LR L AT+++IR  L   AR +NFNRALK+    S       + +  +   SLDVAVD WA EDAADRLHDLENM+DI
Sbjct:    1 MAEVAGTKTSSSEPLRLLFATLKVIRKILAENARTTNFNRALKQTPVNSHKP---AIPSPKICTRSLDVAVDTWANEDAADRLHDLENMLDI 89          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7490.15655.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 10
Match NameE-valueIdentityDescription
Protein7.030e-9784.57kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein7.400e-9678.22kinase, TKL group n=1 Tax=Ectocarpus siliculosus T... [more]
Uncharacterized1.520e-7869.15protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Protein9.200e-7870.74kinase domain-containing protein n=2 Tax=Ectocarpu... [more]
Kinesin2.030e-7370.21light chain-like protein n=1 Tax=Ectocarpus silicu... [more]
Protein2.180e-6964.36kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein5.240e-5457.75kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein5.960e-5457.75kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
Protein2.220e-2184.21kinase domain-containing protein n=1 Tax=Ectocarpu... [more]
PK_Tyr_Ser-Thr4.190e-1554.35domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7490contigE_fasciculatus_S2_contig7490:1059..1900 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score308.9
Seed ortholog evalue1.6e-81
Seed eggNOG ortholog2880.D7G890
Model size564
Hectar predicted targeting categoryother localisation
Exons2
EggNOG free text desc.protein kinase activity
EggNOG OGsCOG0515@1,KOG0192@2759
Cds size564
COG Functional cat.KLT
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842411.2216246-CDS-E_fasciculatus_S2_contig7490:1058..15231696842411.2216246-CDS-E_fasciculatus_S2_contig7490:1058..1523Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7490 1059..1523 +
1696842411.2413814-CDS-E_fasciculatus_S2_contig7490:1801..19001696842411.2413814-CDS-E_fasciculatus_S2_contig7490:1801..1900Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7490 1802..1900 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7490.15655.1prot_E_fasciculatus_S2_contig7490.15655.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7490 1059..1900 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7490.15655.1

>prot_E_fasciculatus_S2_contig7490.15655.1 ID=prot_E_fasciculatus_S2_contig7490.15655.1|Name=mRNA_E_fasciculatus_S2_contig7490.15655.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=188bp
MADVAVLVLRAAAEIRDIAKNIKENDRQACRLLERVKAVEPAVLAVKQGT
KTSSPESLRQLLATVEMIRNFLEGYARMSNFNRALKRKSNASEFTQFGVL
LTEGVQALSLDVAVDAWAKEDAADRLHDLENMVDIMERMERNRTENHAQI
LGLLEALRKDERSELTAWDEIDFDKDLDFEGSTRLGSG
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mRNA from alignment at E_fasciculatus_S2_contig7490:1059..1900+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7490.15655.1 ID=mRNA_E_fasciculatus_S2_contig7490.15655.1|Name=mRNA_E_fasciculatus_S2_contig7490.15655.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=842bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7490:1059..1900+ (Ectocarpus fasciculatus EfasUO2)
ATGGCGGACGTCGCGGTACTCGTTCTTCGTGCAGCAGCCGAGATCCGGGA CATCGCGAAAAATATAAAAGAAAACGACCGGCAAGCTTGTCGCCTACTCG AGAGGGTGAAAGCTGTCGAGCCTGCCGTGCTAGCCGTCAAACAGGGCACC AAAACGTCTTCTCCCGAGTCACTGCGCCAGCTCTTAGCGACCGTGGAGAT GATCCGAAACTTCTTGGAAGGCTACGCACGGATGTCGAACTTCAACCGCG CCCTCAAGCGTAAATCAAACGCCAGTGAATTCACACAATTCGGCGTTCTC CTCACTGAGGGCGTGCAAGCGCTTTCGCTGGACGTCGCCGTGGACGCGTG GGCCAAAGAAGATGCAGCCGACCGCCTGCATGATCTCGAGAACATGGTGG ACATCATGGAAAGGATGGAGCGCAACCGCACGGAAAACCACGCACAGATT TTGGGGTTGTTGGAGGTGAGCATGGGCGGATCTTCGATCTAGAGGCGCGC AAGCAAGTCTCTCCGCCGTGTGTGTTAGTTTAGTTGATTCACATTTTTGT TGCTTGCGTCGCAGTCGGGTGTCATCGCCAATACTCGGAACGGATGTGAT GTACAATGTACGCACCTGTTATGGGTCACGGCGCAGACTGTGTTACACGT CGGTACATTGGTGAGCAGGATGCGTAGCGACAGGCGATAATCTGACCATG CCTCCGTCCTTCACCTCGACATGCACTGCTACCTGTCACTCAGGCACTCC GAAAAGACGAGCGGTCGGAGCTAACGGCGTGGGACGAGATCGACTTTGAC AAAGACCTGGACTTCGAGGGCAGCACCCGCCTCGGGTCGGGG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7490:1059..1900+

>mRNA_E_fasciculatus_S2_contig7490.15655.1 ID=mRNA_E_fasciculatus_S2_contig7490.15655.1|Name=mRNA_E_fasciculatus_S2_contig7490.15655.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=564bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7490:1059..1900+ (Ectocarpus fasciculatus EfasUO2)
ATGGCGGACGTCGCGGTACTCGTTCTTCGTGCAGCAGCCGAGATCCGGGA
CATCGCGAAAAATATAAAAGAAAACGACCGGCAAGCTTGTCGCCTACTCG
AGAGGGTGAAAGCTGTCGAGCCTGCCGTGCTAGCCGTCAAACAGGGCACC
AAAACGTCTTCTCCCGAGTCACTGCGCCAGCTCTTAGCGACCGTGGAGAT
GATCCGAAACTTCTTGGAAGGCTACGCACGGATGTCGAACTTCAACCGCG
CCCTCAAGCGTAAATCAAACGCCAGTGAATTCACACAATTCGGCGTTCTC
CTCACTGAGGGCGTGCAAGCGCTTTCGCTGGACGTCGCCGTGGACGCGTG
GGCCAAAGAAGATGCAGCCGACCGCCTGCATGATCTCGAGAACATGGTGG
ACATCATGGAAAGGATGGAGCGCAACCGCACGGAAAACCACGCACAGATT
TTGGGGTTGTTGGAGGCACTCCGAAAAGACGAGCGGTCGGAGCTAACGGC
GTGGGACGAGATCGACTTTGACAAAGACCTGGACTTCGAGGGCAGCACCC
GCCTCGGGTCGGGG
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