mRNA_E_fasciculatus_S2_contig749.15654.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LFE6_ECTSI) HSP 1 Score: 353 bits (905), Expect = 8.820e-105 Identity = 196/296 (66.22%), Postives = 227/296 (76.69%), Query Frame = 1
Query: 1 QIRDYLALPRSGAQSSRSRLALVWQATSEADLFGTDEIAGMQEKSDGLLEVMMLISGEHRKRNIPGASIRKGAEKLLKKAGFASPALSSPGSSIRHWTPGRRTFRPASRKPIAKYTRPTRDLSMSTISESKAGVFISGRSALRDSTHRAASTKTIAPVS------VPKTVARTLTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERELAEELTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
QIRDYLALP+SGAQSS+SRLALVWQATSEADLFG DEIA MQEKSDGLLEV+MLISG+HRKRNIPGA+ RKGAE LKKAG SP++S+P +SIRHWTPG RP+R+LSM TISE+K GVF+SGRS +RD+T +ASTKTIA + + TV TLTRGKVS EVL+EVFGPNLLGI++AART+D+DS + RRRPR+ G+T EDDY D+R+LA+EL GSDTTPG+LQVVVSGPTGFV+ VETILGEMGIPSSAIVLLD
Sbjct: 1348 QIRDYLALPKSGAQSSKSRLALVWQATSEADLFGADEIAAMQEKSDGLLEVVMLISGQHRKRNIPGAAFRKGAETFLKKAGLISPSVSAPSNSIRHWTPG----------------RPSRELSMGTISEAKPGVFVSGRSVVRDNTSTSASTKTIATRASSIERRMSSTVVGTLTRGKVSREVLDEVFGPNLLGIMEAARTKDEDSPSMDRRRPRVTGTTXXXXXXXXXXXXXXXXXXXXEDDYRDDRDLADELAGSDTTPGRLQVVVSGPTGFVSLVETILGEMGIPSSAIVLLD 1627
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBL8_9PHAE) HSP 1 Score: 225 bits (573), Expect = 2.640e-60 Identity = 151/308 (49.03%), Postives = 185/308 (60.06%), Query Frame = 1
Query: 1 QIRDYLALPRSGAQSSRSRLALVWQATSEADLFGTDEIAGMQEKSDGLLEVMMLISGEHRKRNIPGASIRKGAEKLLKKAGFASPALSSPGSSIRHWTPGRRTFRPASRKPIA--KYTRPTRDLSMSTISESKA-GVFISGRSALRDSTHRAASTKTIAPVSVPKTVARTLTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERE---------------LAEELTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
QIRDYLALPR AQSSRSRLALVWQATSEADL+G++E+ +Q KS+GLLEV +LISGEHRKRNIPGA+ RKGA KLL K G SPA +SP SS R GRR P+ + ++ K T + S+ A GV IS +++ + R T P + +VA L GKVS EVLEEVFGP+LLG+V+AAR +++ S T R+R + Y D + LA+EL GS TPGKLQVVVSGP+GFV +VETIL EMG+ SAIVLLD
Sbjct: 1587 QIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKTGLVSPAAASPASSFRTMPSGRRVRVPSGKNSVSSIKSINETSSVVFPEDSDKGARGVEISTGTSILSTVRRHLRTSERIPSNT--SVASALAHGKVSREVLEEVFGPSLLGVVEAARKKEEQLSDTVRKRLQSLARXXXXXXXXXXXXXXXXXXXXXXKKYGDVGDXXXXXXXXXXVFADFLADELAGSGDTPGKLQVVVSGPSGFVFYVETILTEMGVLPSAIVLLD 1892
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Dopamine (beta-monooxygenase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FX04_ECTSI) HSP 1 Score: 197 bits (502), Expect = 4.710e-51 Identity = 144/308 (46.75%), Postives = 174/308 (56.49%), Query Frame = 1
Query: 1 QIRDYLALPRSGAQSSRSRLALVWQATSEADLFGTDEIAGMQ-------EKSDGLLEVMMLISGEHRKRNIPGASIRKGAEKLLKKAGFASPALSSPGSSIRHWTPGRRTFRPASRKPIA--KYTRPTRDLSMSTISESKA-GVFISGRSALRDSTHRAASTKTIAPVSVPKTVARTLTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERE--------LAEELTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
QIRDYLALPR AQSSRSRLALVWQATSEADL+G++E+ +Q KS+GLLEV +LISGEHRKRNIPGA+ RKGA KLL KAG SPA +SP +S R GR P+++ ++ K T SE + GV IS +++ + R T P + +VA L RGKVS EVLEEVFGP+LLG+V+AAR LA++L GS TPGKLQVVVSGP+GFV +VETIL EMG+ SAIVLLD
Sbjct: 897 QIRDYLALPRVAAQSSRSRLALVWQATSEADLYGSEEMTELQYDRRLCEAKSNGLLEVTVLISGEHRKRNIPGAAFRKGAGKLLAKAGLVSPAAASPANSFRTMPSGR----PSNKNSVSSIKSINETSSAVFPEDSEKEGRGVEISTGTSILSTVRRHLRTSERIPSNT--SVAGALARGKVSREVLEEVFGPSLLGVVEAARKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVFADFLADDLAGSGDTPGKLQVVVSGPSGFVFYVETILTEMGVLPSAIVLLD 1198
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGS9_9PHAE) HSP 1 Score: 147 bits (372), Expect = 3.720e-39 Identity = 83/132 (62.88%), Postives = 100/132 (75.76%), Query Frame = 1
Query: 475 SVPKTVARTLTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERELAEELTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
SVP TVA TLTRGKV+ EVL+EVFGP+LLGI++AART+D DS T RR+PR+ GST +TS A+GGG+L+A+++D ED YND +LQVVVS PT FV+ VETILGEMGIPSSAIVLLD
Sbjct: 6 SVPSTVAGTLTRGKVNREVLDEVFGPSLLGILEAARTKDKDSPTMDRRQPRVTGSTANTSSAAKGGGDLKAEEQDEEDHYNDNE--------------RLQVVVSEPTVFVSLVETILGEMGIPSSAIVLLD 123
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTF1_9PHAE) HSP 1 Score: 113 bits (282), Expect = 4.550e-24 Identity = 112/359 (31.20%), Postives = 148/359 (41.23%), Query Frame = 1
Query: 1 QIRDYLALPRSGAQSSRSRLALVWQATSEADLFGTDEIAGMQEKSDGLLEVMMLISGEHRKRNIPGASIRKGAEKLLKKAGFASPALSS-------------------------------------------PGSSIRHWTPGRRTFRPASRKPIAKY--TRPTRDLSMS---TISESKAGVFISGRSALRDSTHRAAST--------KTIAPVSVPKT-------------VARTLTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERELAEELTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
QIR YL++PR S R RL LVWQ+T+EAD + TDEI MQEKS+GLLEV L S R+RN PGA+ RK + G +P+ +S PG +H T + + K I TR R++ T S+ + + R +T K + V P V L RG+V+ E+LE VFG LL + A Q R + S +D EG GE + EL G+D T GKLQVVVSGPT FVA V+ +L +MG+P+ + VLLD
Sbjct: 6 QIRSYLSIPRDTMFSKRPRLVLVWQSTTEADFYSTDEITAMQEKSNGLLEVTALTSEGGRRRNAPGAAFRKARDIAWNVFGSPAPSNTSSANPFTPAGSNLDSSSSEXXXXXXXXSLARDGGRXXXXXXXXTPGRDEKHTAADAGTKKERAPKGIGNLLPTRTWRNVKWKESPTTSDHRRAPMQDTSVSFRHVHEFGVATEIEFKMPEKDVFRVKAPHREKVGICVMGENYQVGDGLVRGRVNREILENVFGEALLSSIAAYNRQ--------RALNSLACSDSDVGDEKEGQGEDDG-----------------ELIGTDQTAGKLQVVVSGPTAFVANVKQLLTQMGVPAGSTVLLD 339
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQW8_ECTSI) HSP 1 Score: 113 bits (283), Expect = 8.290e-23 Identity = 54/94 (57.45%), Postives = 72/94 (76.60%), Query Frame = 1
Query: 1 QIRDYLALPRSGAQSSRSRLALVWQATSEADLFGTDEIAGMQEKSDGLLEVMMLISGEHRKRNIPGASIRKGAEKLLKKAGFASPALSSPGSSI 282
QIRDYLALPR A S+RSRL L+WQ+ SEA+L+G++EI MQ KS GLLEV++L+SG+ R+RN+PGA+ R+G + + K SP SSP SS+
Sbjct: 1099 QIRDYLALPRDQAHSTRSRLCLIWQSMSEAELYGSEEITEMQAKSKGLLEVIVLVSGDQRRRNVPGAAFRRGKKMMSKAMAMVSPVSSSPSSSV 1192
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9F0_9PHAE) HSP 1 Score: 75.5 bits (184), Expect = 6.700e-13 Identity = 47/123 (38.21%), Postives = 62/123 (50.41%), Query Frame = 1
Query: 502 LTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERELAEELTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
L RGKV+ E+L++ FGP LL +++ Q+ D P + G ++L G+DT GKLQVVVSGP GFV +VE+IL EMG+PS AIV LD
Sbjct: 13 LLRGKVTREILQKAFGPALLALLEEFAKQEQSRHXXXXXXXXXXXXKRDEGSPEDARGIT-----------------LDDLAGTDTEGGKLQVVVSGPNGFVFYVESILAEMGVPSEAIVFLD 118
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J2_ECTSI) HSP 1 Score: 69.7 bits (169), Expect = 8.970e-9 Identity = 50/123 (40.65%), Postives = 62/123 (50.41%), Query Frame = 1
Query: 502 LTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERELAEELTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
L RG+V+ E+LE VFG L+ SS A R R S L D D+ E E +L G+D T GKLQVVVSGPT FVA V+ +L EMG+P+ + VLLD
Sbjct: 1393 LVRGRVNREILETVFGEALI------------SSIAAYNRQRALNS-------------LACSDSDVGDNKEGEGEDDRDLIGTDQTAGKLQVVVSGPTAFVANVKQLLTEMGVPAGSTVLLD 1490
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K303_9PHAE) HSP 1 Score: 58.2 bits (139), Expect = 3.950e-7 Identity = 29/32 (90.62%), Postives = 29/32 (90.62%), Query Frame = 1
Query: 31 SGAQSSRSRLALVWQATSEADLFGTDEIAGMQ 126
SGA SSRSRLALVWQATSEADLFG DEIA MQ
Sbjct: 56 SGAPSSRSRLALVWQATSEADLFGADEIAAMQ 87
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Match: Peroxidase (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G7J1_ECTSI) HSP 1 Score: 60.8 bits (146), Expect = 5.200e-6 Identity = 47/127 (37.01%), Postives = 64/127 (50.39%), Query Frame = 1
Query: 502 LTRGKVSHEVLEEVFGPNLLGIVDAARTQDDDSSTTARRRPRINGSTTDTSRPAEGGGELEAKQRDAEDDYNDERELAEE----LTGSDTTPGKLQVVVSGPTGFVAFVETILGEMGIPSSAIVLLD 870
L RGKV+ E+LE VFG L + A Q E+++ R ++ D +DE+E +E LT +D T KLQVVVSGP+ FVA V +L +MG+PS +VLLD
Sbjct: 1392 LVRGKVNREILETVFGEALTTPIAADNRQ----------------------------REVKSLLR-SDSDISDEKEGQDEDDGDLTSTDQTSRKLQVVVSGPSEFVANVWQLLDQMGVPSGCMVLLD 1489 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig749.15654.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 11
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig749.15654.1 >prot_E_fasciculatus_S2_contig749.15654.1 ID=prot_E_fasciculatus_S2_contig749.15654.1|Name=mRNA_E_fasciculatus_S2_contig749.15654.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=251bp MQEKSDGLLEVMMLISGEHRKRNIPGASIRKGAEKLLKKAGFASPALSSPback to top mRNA from alignment at E_fasciculatus_S2_contig749:24675..28070+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig749.15654.1 ID=mRNA_E_fasciculatus_S2_contig749.15654.1|Name=mRNA_E_fasciculatus_S2_contig749.15654.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3396bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig749:24675..28070+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig749:24675..28070+ >mRNA_E_fasciculatus_S2_contig749.15654.1 ID=mRNA_E_fasciculatus_S2_contig749.15654.1|Name=mRNA_E_fasciculatus_S2_contig749.15654.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=753bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig749:24675..28070+ (Ectocarpus fasciculatus EfasUO2)back to top |