mRNA_E_fasciculatus_S2_contig747.15637.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig747.15637.1
Unique NamemRNA_E_fasciculatus_S2_contig747.15637.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6W2_ECTSI)

HSP 1 Score: 739 bits (1907), Expect = 2.660e-251
Identity = 419/650 (64.46%), Postives = 444/650 (68.31%), Query Frame = 1
Query:    1 MQRAPASGPQAGLTAAVEPTAAERLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVRDEKV---------------------------------------------------------------------------VNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLRVGCGASKNLELPRPEALQ--------------------------------------------------------------------------------APGAAKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPSQPIATSRVAEYLGQLKVLRRYFKAEATSDGRYSLMALWRTVEDLADESQVAAVYMNNLQGVLEEAPWRQAGHLLWLMGKHEQAEPLCQRSLAICETSLGPDHPAVATALSNVAVL 1485
            MQRAP SG QAGL AAVEPTAAERLD VG+LL EKKPWPAFL +GARA EEWEACPTPVQEAL W+ARATVGVLDIASVGPL PVC+AFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPM DFVATTN+LAAFAA WAKGGKCRALFCHRSD STL +FEEGLRTISNDIALV+GLEHHQLLLAV RQLRPPTLPAMASVP G ISLTD H+SRP+LLG  I YL NT VGD PCVL GMAGAGKSVLASAVVRDEKV                                                                           V+ LKLTGLQLLVTTRDRSVVSMP ECVEVGDM EDEAL+VLRVGCGASKNLELPR EALQ                                                                                APGA KTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADP++PIATSR AEYLGQLKVLRRY     TSDG Y+LMALWR+VEDL  ES+VAAVYMNNLQGV E APWRQAG +L LMGK+ +A+PL  R++ I E +LGPDHPA+AT L+N A L
Sbjct:    1 MQRAPTSGGQAGLVAAVEPTAAERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALVWMARATVGVLDIASVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMKDFVATTNDLAAFAATWAKGGKCRALFCHRSDRSTLTDFEEGLRTISNDIALVDGLEHHQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVRDEKVREHFHAGMFWVRARDAKDQLHACLEGFALRVASTSGTTSPGLGSVEEVTRYLKAVCADSVSPRLVVLDDVWEREIVDALKLTGLQLLVTTRDRSVVSMPGECVEVGDMEEDEALEVLRVGCGASKNLELPRAEALQGPPQDPKSWRTLHEALSKAMSTRLGTDRIMAVPKRVDAVLEVSLGAMADDPAKQQRCLFLAVLAPGTLAPSDMLEDLWDEAPGATKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPNRPIATSRFAEYLGQLKVLRRYLGDGETSDGVYALMALWRSVEDLVGESRVAAVYMNNLQGVPEHAPWRQAGRVLELMGKYAEADPLYLRAIEIGENTLGPDHPALATQLNNRAGL 650          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMV3_9PHAE)

HSP 1 Score: 546 bits (1406), Expect = 7.620e-189
Identity = 321/525 (61.14%), Postives = 341/525 (64.95%), Query Frame = 1
Query:   28 QAGLTAAVEPTAAERLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVRDEKV---------------------------------------------------------------------------VNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLRVGCGASKNLELPRPEALQ------------------------------------------APGAAKTFAAQLVDQSMLQPAGDAFRVHDLVLLFLKPKLKADPSQPIATSRVAEYLGQLKVLRRYFKAEATSDGRYSLMAL 1251
            QAGL AAVEPTA ERLD VG+LL EKKPWPAFL LGARA +EWEACPTPVQEALAW+A ATVGVLD+ SVGPL PVC+AFKGLIEAAEGAAESQDKLKGLISRC FLTTVLIQHDRAVGPLAQ                        GGKCRALFCHRSD+STL +FEE LRTISNDIALV+GLEH QLLLAV RQLRPPTLPAMASVP G ISLTD H+SRP+LLG  I YL NT VGD PCVL GMAGAGKSVLASAVV+ EKV                                                                           V+TLKLTGLQLLVTTRDRSVVSMP ECVEVGDM EDEAL++LRVGCGASKNLELPR E LQ                                          APGAAKTFA QLVDQSMLQPAGDA RVHDLVLLFLKPKLKAD S+PI TSR+AEYLG LKVLRRY +     DGR + + +
Sbjct:   15 QAGLVAAVEPTAVERLDHVGQLLAEKKPWPAFLHLGARATKEWEACPTPVQEALAWMATATVGVLDMTSVGPLEPVCQAFKGLIEAAEGAAESQDKLKGLISRCPFLTTVLIQHDRAVGPLAQ------------------------GGKCRALFCHRSDLSTLTDFEERLRTISNDIALVDGLEHQQLLLAVYRQLRPPTLPAMASVPAGPISLTDGHISRPSLLGRAIGYLTNTAVGDAPCVLTGMAGAGKSVLASAVVQVEKVREHFHAGMYWVRARDAKDQLHACLEGLALRVASTSGTTAPGLGSVEEVTRYLKAVCADSVSPRLIVLDDVWEREVVDTLKLTGLQLLVTTRDRSVVSMPGECVEVGDM-EDEALELLRVGCGASKNLELPRAEVLQVVVDCGNDRIMTVPKRVDAVLEVSLGAMAEDPAKQRRCLFLAAPGAAKTFARQLVDQSMLQPAGDALRVHDLVLLFLKPKLKADSSRPITTSRIAEYLGHLKVLRRYVE-----DGRRATVCI 509          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G722_ECTSI)

HSP 1 Score: 403 bits (1035), Expect = 2.370e-124
Identity = 286/688 (41.57%), Postives = 345/688 (50.15%), Query Frame = 1
Query:    1 MQRAPASGPQAGLTAA--VEPTAAERLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVR--------------------------------------------------------------------------------DEKVVNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLR-----VG----------------CG---------------------------ASKNLE----------------------------LPRPE-----ALQAPGA------------------AKTFAAQLVDQSMLQPAGDA-FRVHDLVLLFLKPKLKADPSQ-PIATSRVAEYLGQLKVLRRYFKAE--ATSDGRYSLMALWRTVEDLADESQVAAVYMNNLQGVLEEAPWRQA--------GHLLWLMGKHEQAEPLCQRSLAICETSLGPDHPAVATALSNVAVL 1485
            MQRAPASG QAGL AA  VEPT  ERLD VG+LL EKKPWPAFL +GARA EEWEACPTPVQEALAW+  + VGVL +ASVGPLVPVC AFK LIEAAEGAAE QDKL+ L+S+CAFL TVLIQH RAVGPLAQVQKP+ DFV TTNELA FAA+WAKGGKCRA  CHR D+S L  FEE LR I +DIALV+GLEHHQ  LA    L PP+LP MA+VP GA+ L  +     A +      L        P  + GM G GKSVLASA VR                                                                                + +VV+     G ++L+TTRDRSVV +P   +E+GDM E+EAL++LR     VG                CG                            +K LE                            + + E     A+ A GA                   +  A  LV + +L   G   +RVHDLVL F K  ++A+      AT+  A+YLG+L VL  Y   E  A   G + L ALWR+VE L+ + ++     +N  G LE     +A        G L  + GK+ +AEPL +RSLAI E  LGP+HP VAT+L N A L
Sbjct:   44 MQRAPASGGQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVVTTNELAGFAARWAKGGKCRAFCCHRPDLSALAGFEECLRRIGSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPTGALELPSSSYVERAAVQEVADGLTTPEESRAPYTVVGMGGGGKSVLASAAVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAWDVGAAPTDAPHGVPHVLDRLEQVQQHLAAVASTGTSPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGLPAGRLELGDMTEEEALELLRKTSGTVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEVEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLEGYGDPEHGAGGQGLFFLDALWRSVEKLSGDPELEVASYHNSLGELESCEATKAVARSYWSVGFLFNIQGKYAEAEPLYERSLAIQEKVLGPEHPDVATSLDNRASL 731          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF10_9PHAE)

HSP 1 Score: 379 bits (973), Expect = 7.920e-122
Identity = 218/360 (60.56%), Postives = 236/360 (65.56%), Query Frame = 1
Query:  157 EACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVRDEKV----------------------------------------------------------------------------VNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLRVGCGASKNLELPRPEALQ 1008
            EACPTPVQEALAW+A ATVGVLDIASVGPLVPVC+AFK LIEAAEGAAESQDKL+ L+ RC  LTTVLIQH RAVGPLAQVQKPM DF+ TTN L               LFCHR+D+STL +FEEGLR I+NDIALV+GLEHHQLLLA+   LRPPTLP MA+VPRGAISLTDAHVSRP +L   I YL NT  GD PCVL GMAG GKSVLASAVVRDEKV                                                                            VN L++T LQLLVTTRDRSVVSMP EC+EVGDM EDEAL+VLRVGCGA KNLELPR +ALQ
Sbjct:  259 EACPTPVQEALAWMATATVGVLDIASVGPLVPVCQAFKALIEAAEGAAESQDKLQRLVPRCTMLTTVLIQHHRAVGPLAQVQKPMKDFIVTTNRL---------------LFCHRTDLSTLADFEEGLRGITNDIALVDGLEHHQLLLAMHGHLRPPTLPDMAAVPRGAISLTDAHVSRPLMLERAIDYLTNTARGDAPCVLTGMAGGGKSVLASAVVRDEKVREHFSAGIFWWRVGRISKDRLHEWLEGLVLRVASASGTTPPMLGSVEEVTFYLKAFCADAESQRLVVLDDVWEPEVVNALQVTELQLLVTTRDRSVVSMPGECIEVGDMEEDEALEVLRVGCGAPKNLELPRLQALQ 603          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G720_ECTSI)

HSP 1 Score: 395 bits (1016), Expect = 3.480e-120
Identity = 285/685 (41.61%), Postives = 344/685 (50.22%), Query Frame = 1
Query:    1 MQRAPASGPQAGLTAA--VEPTAAERLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVR--------------------------------------------------------------------------------DEKVVNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLRVGCGA------------------------------------------------SKNLE----------------------------LPRPE-----ALQAPGA------------------AKTFAAQLVDQSMLQPAGDA-FRVHDLVLLFLKPKLKADPSQ-PIATSRVAEYLGQLKVLRRYFKAE-ATSD-GRYSLMALWRTVEDLA-DESQVAAVYMNNLQGVLEEAPWRQA--------GHLLWLMGKHEQAEPLCQRSLAICETSLGPDHPAVATALSN 1473
            MQRAPASG QAGL AA  VEPT  ERLD VG+LL EKKPWPAFL +GARA EEWEACPTPVQEALAW+  + VGVL +ASVGPLVPVC AFK LIEAAEGAAE QDKL+ L+S+CAFL TVLIQH RAVGPLAQVQKP+ DFVATTNELA FAA+WAKGGKCRA FCHR D+S L  FEE LR I +DIALV+GLEHHQ  LA    L PP+LP MA+VP GA+ L  +     A +      L        P  + GM G GKSVLASAVVR                                                                                + +VV+     G ++L+TTRDRSVV +P   +E+GD+ E+EAL++LR   GA                                                +K LE                            + + E     A+ A GA                   +  A  LV + +L   G   +RVHDLVL F K  ++A+      AT+  A+YLG+L VL  Y   E  T D G + L ALWR+VE L+ D     A Y  +L+  LE     +A        G L  +  K+ +AEPL +RS AI E  LGP+HP VAT+L+N
Sbjct:   27 MQRAPASGDQAGLAAAAVVEPTTVERLDHVGKLLAEKKPWPAFLHIGARATEEWEACPTPVQEALAWMTTSAVGVLGVASVGPLVPVCEAFKALIEAAEGAAECQDKLQSLVSQCAFLATVLIQHGRAVGPLAQVQKPIQDFVATTNELAGFAARWAKGGKCRAFFCHRPDLSALAGFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPSSSYVERAAVQEVADGLTAPEESRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLARDVGAAPTDAPCGVPRVLDSLEQVRQHLAAVTSTGTSQRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVGVPAGRLELGDVTEEEALELLRKTSGAVGQPGDDVRTKMTKVVALCGHLPLVLAIAGSMSVVRGKGLTAVAWEELAKELENVAKKMRARGEQSSSMKVVLETSFDSLAVRKQEEFLKMAVLAAGALAPIEMLRNLWEIEDAEGTRDDAEGLVSKCLLHAVGGGGYRVHDLVLEFAKTSIRAEEETVKKATALQAQYLGRLDVLESYGDPEHGTGDQGLFFLDALWRSVEKLSGDPGLEVASYRASLEE-LESCEATEAVATSYGSVGFLFNIQSKYAEAEPLYERSRAIQEKVLGPEHPHVATSLNN 710          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXS7_9PHAE)

HSP 1 Score: 327 bits (837), Expect = 1.130e-100
Identity = 189/380 (49.74%), Postives = 223/380 (58.68%), Query Frame = 1
Query:   70 RLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVR--------------------------------------------------------------------------------DEKVVNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLRVGCGA 969
            RL++VG+LL EK+PWPAFL + ARA EEWEACPT  QEAL WIA ATVGVLD+ASVGPLVPVC AFK LIEAAEGAAESQ KL+ L+S+CAFL TVLIQH RAVGPLAQV KP+ DFV TTN+LA FAA+WA GGKCRA FCHR D+S L +FEE LR I +DIALV+GLEHHQ  LA    L PP+LP MA+VP GA+ L  +     A +      L +      P  + GM G GKSVLASAVVR                                                                                + +VV+     G ++L+TTRDRSVV +P   +EVGDM E+EAL++LR   GA
Sbjct:   15 RLERVGKLLAEKRPWPAFLHIEARATEEWEACPTVAQEALTWIATATVGVLDVASVGPLVPVCEAFKALIEAAEGAAESQHKLQSLVSQCAFLATVLIQHGRAVGPLAQVHKPIEDFVVTTNDLAGFAARWANGGKCRAFFCHRPDLSALADFEECLRRIRSDIALVDGLEHHQSFLAALPSLLPPSLPDMAAVPAGALELPCSSYVERAAVQEVADGLTSPEDPRAPYTVVGMGGGGKSVLASAVVRKPSVREHFRGGIFWVRVGRGAKSSLLALLQGLAREMGAARTDAPHTVPHVLDGLEQVKQHLAAVASTGTFPRLVVLDDVWEREVVDAFVPLGFKVLLTTRDRSVVVVPAGRLEVGDMTEEEALELLRKSSGA 394          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (and TPR repeat-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGG5_ECTSI)

HSP 1 Score: 330 bits (846), Expect = 1.470e-96
Identity = 200/407 (49.14%), Postives = 238/407 (58.48%), Query Frame = 1
Query:    1 MQRAPASGPQAGL---TAAVEPTAAERLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDR-PCVLAGMAGAGKSVLASAVVR---------------------------------------------------------------------------------DEKVVNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLRVGCG 966
            MQR PAS  QAGL   T AVEPT  ERL+ VG+LL EK+PWPAFL +GARA EEWEACPT  QEAL W+  A VGVLD+ASVGPLVPVC+A K LIEAAEGAAE +DK++ L+S+CAFL TVLIQH RAVG LAQV KP+ DFV TTNELA FAA+WAK GKCRA FCHR D+S L  FEE LR I +DIALV+GLE HQL LA    LRPP L  MA+VP GA+ L   +V R A+    +A  +      R P  + G+ G GKSVLASAVVR                                                                                 + +VV+ L   G ++L+TTRD SVV +P   +++GDM E+EAL++LR   G
Sbjct:    1 MQRVPASASQAGLAVATTAVEPTTVERLEHVGKLLAEKRPWPAFLHIGARATEEWEACPTLAQEALTWMTTAAVGVLDVASVGPLVPVCQALKALIEAAEGAAECEDKVQSLVSQCAFLATVLIQHGRAVGALAQVHKPIQDFVVTTNELAGFAARWAKDGKCRAFFCHRPDLSALAGFEECLRGIRSDIALVDGLEQHQLFLAALPSLRPPRLLDMAAVPAGALDLPRGYVERAAV--QEVADGLTAPEEPRAPYTVVGLGGGGKSVLASAVVRKPSVREHFRGGISWVRVGRGAKNSLLPLLQGLAREMGVAPTDAPHAVPQVLDSLEQVQQHLAAVVASTGTSPRLVVLDDVWEREVVDALVPLGFKVLLTTRDWSVVVVPARRLDLGDMTEEEALELLRKTSG 405          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW28_9PHAE)

HSP 1 Score: 276 bits (705), Expect = 2.710e-84
Identity = 160/301 (53.16%), Postives = 195/301 (64.78%), Query Frame = 1
Query:  145 LEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVR-------------------------------DEKVVNTLKLTGLQLLVTTRDRSVVSMPTECVEVGDMGEDEALDVLR 954
            +EE EACP+PVQEAL W+A + VGVLDIASVGPL PVC+AFK LIEAAEGA ESQ+KL+ L+SRC FLTTVLI+H RAV PLAQVQ P+GDFV TTN+LAAFA            FCHR+D+STL +FEEGLR I  DI   +GLE+HQ  + + R L PP+LP MA+VP GA++L  ++V R A+       L N      P    GM G GKSVLASAVVR                               + +VV+ L   GL++LVTT DRSV+ + + CVEVGDM E EAL++LR
Sbjct:    1 MEELEACPSPVQEALPWMATSAVGVLDIASVGPLEPVCQAFKALIEAAEGAVESQEKLQSLVSRCRFLTTVLIRHRRAVDPLAQVQTPIGDFVVTTNKLAAFAESGPGVASAGRFFCHRTDLSTLTDFEEGLRRIGADINSEDGLEYHQQSIGLGRALLPPSLPDMAAVPAGALALPHSYVERAAVQ-EVADGLTNPEEPRAPYSAVGMGGGGKSVLASAVVRKSSVTQHFRGGRWALGHPRASPRLVVLDDVWEPEVVDALLPLGLKVLVTTIDRSVLGVSSGCVEVGDMTEGEALELLR 300          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUT5_ECTSI)

HSP 1 Score: 261 bits (668), Expect = 2.020e-82
Identity = 134/164 (81.71%), Postives = 143/164 (87.20%), Query Frame = 1
Query:    1 MQRAPASGPQAGLTAAVEPTAAERLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALF 492
            MQRAPA+G Q  + AAVEPTAAERLD VG+LL EK+PWPAFLQ+GARA EEWEACPTPVQEALAW+A  TVGVLD ASVGPLVPVC+AFK LIEAAE AA+ QDKLKGLISRCAFLTTVLIQHDRAVG LAQVQKPM DFVATTN+LA F AKW KGGK R  F
Sbjct:    1 MQRAPANGGQEDVQAAVEPTAAERLDHVGKLLAEKRPWPAFLQIGARANEEWEACPTPVQEALAWMATTTVGVLDTASVGPLVPVCQAFKALIEAAERAADGQDKLKGLISRCAFLTTVLIQHDRAVGRLAQVQKPMKDFVATTNKLAEFTAKWTKGGKRRVFF 164          
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Match: NB-ARC (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK53_9PHAE)

HSP 1 Score: 223 bits (568), Expect = 3.790e-64
Identity = 126/273 (46.15%), Postives = 162/273 (59.34%), Query Frame = 1
Query:    7 RAPASGPQAGLTAAVEPTAAERLDKVGELLTEKKPWPAFLQLGARALEEWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAAESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAFAAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLLAVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDRPCVLAGMAGAGKSVLASAVVRDEKV 825
            RAP+SG      AA  PT  ERL++V  LL  KKPWPAFL  G     EW+ CP   ++AL W+A   VG+LD+ASVGPL PVC+AF  LIEAA+GA E  + L+ L++ CAFL  VLI+H + V  L  V KP+ +FVATT ELA  A   A   KC A  CH+ D   +  F++ LR    DI  +  L+  +++  +  + RP  LP MA VP  A+ L  +HV R  L    +  L  T     P VL GM GAGKS+LAS+VVR E+V
Sbjct:    4 RAPSSGSSVQAGAAAAPTTPERLEEVETLLAYKKPWPAFLCAGVDVHGEWDNCPEGARDALEWMASTAVGLLDVASVGPLTPVCQAFTALIEAAQGAMEVVENLRELVTWCAFLVGVLIEHGKQVDNLKAVNKPLNEFVATTGELAKRANVVAGRSKCMAFLCHKKDAKMMASFDDKLRRFWTDIQGLAVLDIQEIVTRMEERSRPLPLPDMADVPAAALKLPPSHVKRVGLEAEILKSLTATDASGAPYVLLGMGGAGKSLLASSVVRTEEV 276          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig747.15637.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
NB-ARC2.660e-25164.46and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC7.620e-18961.14domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC2.370e-12441.57and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC7.920e-12260.56domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC3.480e-12041.61and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
NB-ARC1.130e-10049.74domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
NB-ARC1.470e-9649.14and TPR repeat-containing protein n=1 Tax=Ectocarp... [more]
Uncharacterized2.710e-8453.16protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized2.020e-8281.71protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
NB-ARC3.790e-6446.15domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig747contigE_fasciculatus_S2_contig747:14426..18022 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score745.3
Seed ortholog evalue1.8e-212
Seed eggNOG ortholog2880.D7G6W2
Model size1485
KEGG koko:K10407
KEGG Pathwayko05132,map05132
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.determination of stomach left/right asymmetry
EggNOG OGsCOG0457@1,KOG1840@2759,KOG4658@1,KOG4658@2759
Cds size1485
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko03019,ko04812
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842409.1344807-CDS-E_fasciculatus_S2_contig747:14425..144941696842409.1344807-CDS-E_fasciculatus_S2_contig747:14425..14494Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig747 14426..14494 +
1696842409.1622586-CDS-E_fasciculatus_S2_contig747:14650..154031696842409.1622586-CDS-E_fasciculatus_S2_contig747:14650..15403Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig747 14651..15403 +
1696842409.1739838-CDS-E_fasciculatus_S2_contig747:15628..158141696842409.1739838-CDS-E_fasciculatus_S2_contig747:15628..15814Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig747 15629..15814 +
1696842409.185172-CDS-E_fasciculatus_S2_contig747:16667..170301696842409.185172-CDS-E_fasciculatus_S2_contig747:16667..17030Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig747 16668..17030 +
1696842409.2009552-CDS-E_fasciculatus_S2_contig747:17908..180221696842409.2009552-CDS-E_fasciculatus_S2_contig747:17908..18022Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig747 17909..18022 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig747.15637.1prot_E_fasciculatus_S2_contig747.15637.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig747 14426..18022 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig747.15637.1

>prot_E_fasciculatus_S2_contig747.15637.1 ID=prot_E_fasciculatus_S2_contig747.15637.1|Name=mRNA_E_fasciculatus_S2_contig747.15637.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=495bp
MQRAPASGPQAGLTAAVEPTAAERLDKVGELLTEKKPWPAFLQLGARALE
EWEACPTPVQEALAWIARATVGVLDIASVGPLVPVCRAFKGLIEAAEGAA
ESQDKLKGLISRCAFLTTVLIQHDRAVGPLAQVQKPMGDFVATTNELAAF
AAKWAKGGKCRALFCHRSDVSTLNEFEEGLRTISNDIALVNGLEHHQLLL
AVCRQLRPPTLPAMASVPRGAISLTDAHVSRPALLGSTIAYLVNTTVGDR
PCVLAGMAGAGKSVLASAVVRDEKVVNTLKLTGLQLLVTTRDRSVVSMPT
ECVEVGDMGEDEALDVLRVGCGASKNLELPRPEALQAPGAAKTFAAQLVD
QSMLQPAGDAFRVHDLVLLFLKPKLKADPSQPIATSRVAEYLGQLKVLRR
YFKAEATSDGRYSLMALWRTVEDLADESQVAAVYMNNLQGVLEEAPWRQA
GHLLWLMGKHEQAEPLCQRSLAICETSLGPDHPAVATALSNVAVL
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mRNA from alignment at E_fasciculatus_S2_contig747:14426..18022+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig747.15637.1 ID=mRNA_E_fasciculatus_S2_contig747.15637.1|Name=mRNA_E_fasciculatus_S2_contig747.15637.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3597bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig747:14426..18022+ (Ectocarpus fasciculatus EfasUO2)
ATGCAACGTGCTCCCGCCAGTGGACCCCAAGCGGGCCTTACGGCAGCGGT GGAGCCCACCGCGGCAGAGGTGCGTGCTATCTTCTCACGAAAGACACACG TTTCAAAATTTTATCATCATTTTGCTGTGGACACATATCCAATCCCCATC CTCGCTCTCAAAAACCTGGTTCCTGCTTGGGTTTCCTCCCTCCGTCCCTC CCTCCCTTCGCTCCCTCCTTCGCAGCGGCTCGATAAGGTTGGCGAGCTTC TCACCGAAAAGAAGCCCTGGCCCGCCTTTCTGCAACTCGGAGCTCGAGCA TTGGAAGAGTGGGAGGCTTGCCCCACTCCCGTACAGGAGGCTCTGGCATG GATAGCGAGAGCTACGGTTGGGGTGCTCGACATTGCGAGCGTAGGGCCCT TAGTGCCTGTGTGCCGGGCTTTCAAGGGGTTGATCGAGGCGGCCGAAGGT GCAGCGGAATCCCAGGATAAGCTCAAGGGACTGATATCCCGGTGCGCTTT CCTCACGACCGTCTTAATTCAGCACGACCGAGCGGTTGGTCCCCTCGCCC AGGTGCAGAAGCCCATGGGAGACTTCGTCGCCACGACCAACGAGCTGGCG GCGTTTGCGGCGAAGTGGGCCAAGGGCGGCAAGTGCAGGGCGTTGTTTTG CCACCGCAGCGACGTGAGCACTCTCAACGAGTTCGAGGAGGGTCTACGCA CCATCAGCAACGACATCGCCTTGGTGAACGGGCTGGAGCATCACCAGCTC TTGTTGGCCGTGTGTCGCCAGTTGCGCCCTCCAACGTTGCCGGCTATGGC TTCGGTACCTCGAGGCGCGATTTCCCTGACCGATGCCCACGTTTCACGGC CTGCGTTGCTCGGGAGCACCATTGCTTACCTCGTGAACACGACTGTGGGC GACAGGCCCTGTGTGCTGGCCGGCATGGCCGGAGCGGGAAAGTCGGTCCT GGCGTCCGCAGTTGTCCGGGATGAAAAGGTCCGTGAGCATTTTAATGCGG GGATGTTTTGGGTGAGGGCGCGTGACGCGAAGGATCAACTTCACGCGTGC TTGGAAGAGCTTGCGTTGCGGTTGGCGTCAACCTCAGGGACTACGGTCCC CGGGCTTGGCAGCGTGGAAGAAGTGACCCGTTACCTGAGAGCGGTATGTG CCGACTCCGTGTCGCCGCGCTTGGTCGTGCTCGACGACGTGTGGGAACGG GAGGTCGTTAACACCCTGAAGCTGACGGGGCTGCAGCTGCTTGTAACCAC GCGCGACCGCTCGGTGGTGTCGATGCCGACAGAGTGCGTTGAAGTGGGGG ATATGGGGGAGGACGAAGCCCTGGATGTACTGCGAGTCGGTTGCGGGGCA TCCAAGAACCTCGAGTTACCGCGTCCTGAGGCGTTGCAGGTGACCATCTC GACAATCGATTTCTTATTGCGGACAGATTTGTGTTGCGCCAGCTAATGTC CTTCCTGTGCTGCGTTCTTCGTATTAGTAGTATAGCAGAACGGTAGTTTT GGCACGCTTGGTGTTCGGATCCCTTTGCCCTTTGGCTGTCAGGAGGCGTT CTCGGCCTTCTTGATTCAGCTACGAACGCGCCCGCCCCTTCGTTACAGGT GGTGGGTGACTGTGGGAGTCTTCCACTCTCGCTTGGACTTGCCGCACCGC TTCTCAAGGGTTCCCCGCAAGACCCCAAGTCCTGGCGAGCTTTGCACGAG GCTTTGAACAAAGCGATGACGACAAGGCTGGGGAACGACCGCATCATGAC CGTACCGAAGCGAGTAGATGCTGTCTTGGAAGTGAGCTTGGGCGCCATGG CAGACGATCCAGCGAAGCAGAAAAGATGCCTGTTCCTTGCGGTAATTGCC CCGGGGACACTGGCACCTTCTGACCTGCTGGAAACATTGTGGGACGAGGT GAGCTTGGAGGTGTTGTGGGAGCAAGGGGAGTAGCGAAGCCCCGCGCGGG AGCGATCTTGTACCCACCTTTTTGTTTTGTTGGCGCATTGGTGCACAAGC GGGCAAAGACTGTCTTGGTCCATCGTACGGAAAGTGTCTACAAGGGTGTT GAGACGTAGTATTCCTCACTTGTTTTTGATCTTTGGTGGCAAATGTCAAA TGCTTTCGGGAAGCCTCGTTCCTCGAAGCATGGTCGCCAACGTTATGGGA GTGAAAAGCGGTCTTCGTAGTGGCTCGCCTTGGCGACAAATGTAAATATC TGATGCTGGTCTTCCCTTCCTCTACTACGCGGCCTCCACCAGGCTCCTGG GGCTGCCAAGACGTTCGCTGCCCAGCTCGTGGATCAGTCCATGCTTCAAC CTGCAGGAGATGCTTTTCGCGTTCACGATCTTGTCTTGCTGTTCCTCAAG CCCAAACTCAAAGCCGATCCCAGCCAGCCCATCGCAACCTCCCGTGTCGC GGAGTATCTGGGGCAGCTGAAGGTCCTGCGAAGATACTTCAAGGCCGAGG CGACGAGTGATGGTAGGTACTCCTTGATGGCCCTGTGGAGGACCGTGGAG GACCTCGCGGACGAGAGCCAAGTCGCAGCTGTGTACATGAACAACCTCCA AGGGGTACTGGAGGAAGCACCGTGGCGACAGGCGGGCCATTTATTATGGC TCATGGTGAGCCGCCGTGGTGAAGGTTCTGATGCGAAGTACCATCACGGT TCCATGTTGGACAATGCTCTGCTGTTGATATAGCATCTGATGAAGAATGC GACGGTTTTGTTTTGTGTTTCCACACGTCTGATTTGCCCGCGGGTGCATC TTTGACTCTGGTCGTGACAGGACTTGATCCTGTGTTTTGACGCATGATGC CGTATGACCCAACCACGAACGCTTGCTTTTCTCTTGCCAGCTGCTGGAAG GGTTTGGTAATCTCATGCAGTTTGAATAGAGTTACGAACGTGCTGCCCCA GGCCCTCGACCTTCACCAACGCTGCTAACGACAACAAGGTGCTTAAAGTG ATGAAGAGGGTTCTCACTTTACAGAAGGAAGAACAGCCTCGCCCAGTGGA GCGTATGCGATAATATGATTTTGTGCGATTTTCGGAACGCTACCATCTGA CCAATATGTTTACACAGCGAGACGGGATACGTGACGTTTGAGGCCATTCT CGTCAGACTTAGGCAGCCTGTGCTTGATTTAACGCGCTGTGCACTTGTTG GCATAGGGGGAATGTCTCTCTAGGCTGAGCATCTGTTCGAAAGGTCACTC ACTATTTGTGCGGGTTCATCGGGTTATCAGCAGCCAGCCGGGCAACTCAG GCTACCATGTTGTGTTTTCCCCTCACCTTTCCCTCGCATCCCAGGGCAAG CATGTACAAGCAGACCCTGAACGTGCGCTTGGATATTTGAAGTTCTTGGT TCAGCCGTGGGCGAAGAACACCCCGACGATGCTTCAGTGCTCACCAACCA AATGTTGTTGTTGAGTATTTTTTATCCTCATAATTTACAAGCGTTGACGA CATTCGTTTGTGCGGTTTGGGGTCGACTTCCAGGGCAAGCATGAACAAGC TGAGCCCCTGTGTCAACGCTCCCTCGCGATCTGCGAGACGTCTCTTGGCC CTGATCACCCCGCGGTGGCGACAGCACTCAGCAACGTGGCGGTGTTG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig747:14426..18022+

>mRNA_E_fasciculatus_S2_contig747.15637.1 ID=mRNA_E_fasciculatus_S2_contig747.15637.1|Name=mRNA_E_fasciculatus_S2_contig747.15637.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1485bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig747:14426..18022+ (Ectocarpus fasciculatus EfasUO2)
ATGCAACGTGCTCCCGCCAGTGGACCCCAAGCGGGCCTTACGGCAGCGGT
GGAGCCCACCGCGGCAGAGCGGCTCGATAAGGTTGGCGAGCTTCTCACCG
AAAAGAAGCCCTGGCCCGCCTTTCTGCAACTCGGAGCTCGAGCATTGGAA
GAGTGGGAGGCTTGCCCCACTCCCGTACAGGAGGCTCTGGCATGGATAGC
GAGAGCTACGGTTGGGGTGCTCGACATTGCGAGCGTAGGGCCCTTAGTGC
CTGTGTGCCGGGCTTTCAAGGGGTTGATCGAGGCGGCCGAAGGTGCAGCG
GAATCCCAGGATAAGCTCAAGGGACTGATATCCCGGTGCGCTTTCCTCAC
GACCGTCTTAATTCAGCACGACCGAGCGGTTGGTCCCCTCGCCCAGGTGC
AGAAGCCCATGGGAGACTTCGTCGCCACGACCAACGAGCTGGCGGCGTTT
GCGGCGAAGTGGGCCAAGGGCGGCAAGTGCAGGGCGTTGTTTTGCCACCG
CAGCGACGTGAGCACTCTCAACGAGTTCGAGGAGGGTCTACGCACCATCA
GCAACGACATCGCCTTGGTGAACGGGCTGGAGCATCACCAGCTCTTGTTG
GCCGTGTGTCGCCAGTTGCGCCCTCCAACGTTGCCGGCTATGGCTTCGGT
ACCTCGAGGCGCGATTTCCCTGACCGATGCCCACGTTTCACGGCCTGCGT
TGCTCGGGAGCACCATTGCTTACCTCGTGAACACGACTGTGGGCGACAGG
CCCTGTGTGCTGGCCGGCATGGCCGGAGCGGGAAAGTCGGTCCTGGCGTC
CGCAGTTGTCCGGGATGAAAAGGTCGTTAACACCCTGAAGCTGACGGGGC
TGCAGCTGCTTGTAACCACGCGCGACCGCTCGGTGGTGTCGATGCCGACA
GAGTGCGTTGAAGTGGGGGATATGGGGGAGGACGAAGCCCTGGATGTACT
GCGAGTCGGTTGCGGGGCATCCAAGAACCTCGAGTTACCGCGTCCTGAGG
CGTTGCAGGCTCCTGGGGCTGCCAAGACGTTCGCTGCCCAGCTCGTGGAT
CAGTCCATGCTTCAACCTGCAGGAGATGCTTTTCGCGTTCACGATCTTGT
CTTGCTGTTCCTCAAGCCCAAACTCAAAGCCGATCCCAGCCAGCCCATCG
CAACCTCCCGTGTCGCGGAGTATCTGGGGCAGCTGAAGGTCCTGCGAAGA
TACTTCAAGGCCGAGGCGACGAGTGATGGTAGGTACTCCTTGATGGCCCT
GTGGAGGACCGTGGAGGACCTCGCGGACGAGAGCCAAGTCGCAGCTGTGT
ACATGAACAACCTCCAAGGGGTACTGGAGGAAGCACCGTGGCGACAGGCG
GGCCATTTATTATGGCTCATGGGCAAGCATGAACAAGCTGAGCCCCTGTG
TCAACGCTCCCTCGCGATCTGCGAGACGTCTCTTGGCCCTGATCACCCCG
CGGTGGCGACAGCACTCAGCAACGTGGCGGTGTTG
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