prot_E_fasciculatus_S2_contig7468.15634.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7468.15634.1
Unique Nameprot_E_fasciculatus_S2_contig7468.15634.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length404
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7468.15634.1 vs. uniprot
Match: D8LAT6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LAT6_ECTSI)

HSP 1 Score: 672 bits (1733), Expect = 7.930e-241
Identity = 349/405 (86.17%), Postives = 368/405 (90.86%), Query Frame = 0
Query:    1 MEDASAVLSPSK----STDGRQDFTSDTANGKRARIGTIHRPWYEKISCCCGIDRSDNSGRSRRGLMISGACLTAGIVLELIATLWAFRQAVQAGGLDGQANCDEDGFLFMQHLSVVTQEMCSQQVDSDLFLSETGLGGDYDPCESTNSGDSSSFLEVCSCSTDIVFDASACAWVALQNSSGVVSNDAGCLARAVEPEFPYSFVPTFGLSECWPANPTGTAELTVTALVVALGSQLMEAVVGFRYLKDPSRGTLLLAAASAAAACGVVAVASVLLSLPSFYAYREGYPTEVATFWLVWAAAGGAAVGALAEFLGTEFFVAEGRLPYLGAFGNGLVWLGSAAMEVIVASFLVWEGERVTTWELLRDGVVGLVTVEIAALLAMWAARFLWTRAKLLLAAKGRRGADD 401
            ME+AS  LSPSK    STDGRQD TSDTANGK   +G        +IS C GIDRSD SGRSRRGL+ISGACL AGIVLELIATLWAFRQAV+AGGLDGQANCDEDG LFMQ LSVVTQE+CSQ++DSD+FLSETGLGGDYDPCESTNSGD+SSFLEVCSCSTDIVFDA AC+WVALQNSSGVVSN AGCLARAVE EFPYSF+PT G SECWPANPTGTAELTVTALVVALGSQL+E VVGFRYLKDPSRGTLLLAAASAAAACGVV VASVLLSLP FYAYR+GYPTEVATFWLVWAAAGGAAVGALAE L TE+F+ +GRLPYLGAFGNGLVWLGSAAMEVIVASFLVWEGERVTTWELLRDGV+GLVTVE+A LLAMWAARFLWTRAKLLLAAKGR GADD
Sbjct:   62 MEEASVALSPSKKSNKSTDGRQDNTSDTANGKGHVLG--------RISGCRGIDRSDISGRSRRGLIISGACLAAGIVLELIATLWAFRQAVEAGGLDGQANCDEDGILFMQQLSVVTQEVCSQRIDSDMFLSETGLGGDYDPCESTNSGDTSSFLEVCSCSTDIVFDAPACSWVALQNSSGVVSNYAGCLARAVEVEFPYSFIPTIGRSECWPANPTGTAELTVTALVVALGSQLIELVVGFRYLKDPSRGTLLLAAASAAAACGVVTVASVLLSLPGFYAYRKGYPTEVATFWLVWAAAGGAAVGALAELLATEYFLTKGRLPYLGAFGNGLVWLGSAAMEVIVASFLVWEGERVTTWELLRDGVIGLVTVELAGLLAMWAARFLWTRAKLLLAAKGRTGADD 458          
BLAST of mRNA_E_fasciculatus_S2_contig7468.15634.1 vs. uniprot
Match: A0A6H5KJM5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJM5_9PHAE)

HSP 1 Score: 109 bits (272), Expect = 9.300e-23
Identity = 109/371 (29.38%), Postives = 165/371 (44.47%), Query Frame = 0
Query:   60 RGLMISGACLTAGIVLELIATLWAFRQAVQAGGLDGQANCDEDGFLFMQHLSVVTQEMCSQQVDSDLFLSETGLGGDYDPCESTNSGDSSSFLEVCSCST-DIVFDASACAWVALQNSSGVVSNDAGCLARAV-------EPEFPYSFVPTFGLSE------CWPANPTGTAELTVTALVVALGSQLMEAVVGFRYLKDPSRGTLLLAAASAAAACGVVAVASVLLSLPSFYAYREG------------YPTEVATFWLVWAAAGGAAVGALAEFLGTEFFVAEGRLPYLGAFGNGLVWLGSAAMEVIVASFLVW---------EGERVTTWELLRDGVVGLVTVEIAALLAMWAARFLWTRA-KLLLAAK 394
            RG+  + A L+ G+ LE+ AT W   QA+ +G  D +A+C     L + H   +    C Q   S ++  E      +  C      +     ++C C+  D V  ++ C W +  ++   +  +  C+A  V       + E+  ++      SE      C P +P G  ++T+  LVV+L  +L+EA VG++  ++P     L+  AS     G+ ++  +L  LP      E             Y   V TF            G LAE +   +F A GR  YLG  GN L WL SA  EV+V ++LVW         E     TW +L   V+GLV +E+AALL +W AR L  RA   LL AK
Sbjct:   39 RGMKHAAAFLSLGLFLEIGATFWTLAQAIASGVFD-EADCGVRA-LSLYHNDRLPSN-CEQLDSSVVWFDEDRTVSTFTSCSGL---EDPPIDQLCDCARYDRV--STGCTWTSASSTRDEI--EGLCVAVPVIALTSDLQEEYGTTYDWLLDSSELEYQDDCRPLSPEGFGDITIALLVVSLSLELVEAYVGYKRWRNPLSVRGLVVVASVLEGVGLFSIWCLLRFLPGGILETEVSENQYKFLNIMLYGVLVVTFG-----------GTLAEIV--FYFSAPGRFRYLGVLGNSLTWLASALTEVVVTAYLVWRLQWWENADETADEETWPVLVAAVIGLVVLEVAALLVLWIARVLIARATSALLTAK 386          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7468.15634.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D8LAT6_ECTSI7.930e-24186.17Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KJM5_9PHAE9.300e-2329.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 291..310
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 363..384
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 85..218
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 385..403
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 322..348
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 219..242
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 272..290
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..60
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 349..362
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 249..271
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 243..248
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 61..84
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 311..321
NoneNo IPR availableTMHMMTMhelixcoord: 250..272
NoneNo IPR availableTMHMMTMhelixcoord: 329..348
NoneNo IPR availableTMHMMTMhelixcoord: 62..84
NoneNo IPR availableTMHMMTMhelixcoord: 363..385
NoneNo IPR availableTMHMMTMhelixcoord: 287..309

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7468contigE_fasciculatus_S2_contig7468:4725..5936 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7468.15634.1mRNA_E_fasciculatus_S2_contig7468.15634.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7468 4725..5936 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7468.15634.1 ID=prot_E_fasciculatus_S2_contig7468.15634.1|Name=mRNA_E_fasciculatus_S2_contig7468.15634.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=404bp
MEDASAVLSPSKSTDGRQDFTSDTANGKRARIGTIHRPWYEKISCCCGID
RSDNSGRSRRGLMISGACLTAGIVLELIATLWAFRQAVQAGGLDGQANCD
EDGFLFMQHLSVVTQEMCSQQVDSDLFLSETGLGGDYDPCESTNSGDSSS
FLEVCSCSTDIVFDASACAWVALQNSSGVVSNDAGCLARAVEPEFPYSFV
PTFGLSECWPANPTGTAELTVTALVVALGSQLMEAVVGFRYLKDPSRGTL
LLAAASAAAACGVVAVASVLLSLPSFYAYREGYPTEVATFWLVWAAAGGA
AVGALAEFLGTEFFVAEGRLPYLGAFGNGLVWLGSAAMEVIVASFLVWEG
ERVTTWELLRDGVVGLVTVEIAALLAMWAARFLWTRAKLLLAAKGRRGAD
DND*
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