prot_E_fasciculatus_S2_contig744.15611.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig744.15611.1
Unique Nameprot_E_fasciculatus_S2_contig744.15611.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length110
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig744.15611.1 vs. uniprot
Match: A0A6H5JBS4_9PHAE (RRM domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JBS4_9PHAE)

HSP 1 Score: 211 bits (536), Expect = 4.450e-61
Identity = 105/111 (94.59%), Postives = 108/111 (97.30%), Query Frame = 0 
Query:    1 MLDRPGEGVVKFAERWAAEMFMSKSKSFGGIPLTMSWYTGPFPGSAPASSQPPRRPHQGPGSFQQAAPVISDGAGDSIELKLAPVQQGVGMGGPRGGGG-WGDDFGKEEGV 110
            MLDRPGEGVVKFAERWAAEMFMSKSKSFGGIPLTMSWYTGPFPGSAPASSQPPRRPHQGP +FQQAAPVISD +GDSIELKLAPVQQG+GMGGPRGGGG WGDDFGKEEGV
Sbjct: 1433 MLDRPGEGVVKFAERWAAEMFMSKSKSFGGIPLTMSWYTGPFPGSAPASSQPPRRPHQGPETFQQAAPVISDVSGDSIELKLAPVQQGLGMGGPRGGGGGWGDDFGKEEGV 1543
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig744.15611.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JBS4_9PHAE4.450e-6194.59RRM domain-containing protein n=2 Tax=Ectocarpus T... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig744contigE_fasciculatus_S2_contig744:3214..5451 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig744.15611.1mRNA_E_fasciculatus_S2_contig744.15611.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig744 3207..5451 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig744.15611.1 ID=prot_E_fasciculatus_S2_contig744.15611.1|Name=mRNA_E_fasciculatus_S2_contig744.15611.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=110bp
MLDRPGEGVVKFAERWAAEMFMSKSKSFGGIPLTMSWYTGPFPGSAPASS
QPPRRPHQGPGSFQQAAPVISDGAGDSIELKLAPVQQGVGMGGPRGGGGW
GDDFGKEEGV
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