mRNA_E_fasciculatus_S2_contig743.15606.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: 2OG-Fe(II) (oxygenase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGV3_ECTSI) HSP 1 Score: 505 bits (1300), Expect = 9.350e-178 Identity = 282/338 (83.43%), Postives = 289/338 (85.50%), Query Frame = 1
Query: 19 KRGRPSPPSEQVGAKRRXXXXXXXXXXXXXXXXCS-CETFHLQSGTGTLRFWPSLLADAAQRRLFEELTVNPDLLPLDPKTGFSGSGGG-----SGNPGPREDAAARGRWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAKEERELRQSPEEIRKAKALSPLLLSWSGQGSKASSTSLGTGDTGGKGSIAGGRGHSSLLTSXXXXXXGRINLTFRRVKEGV 1014
KRGR S P+EQVGAKRR XXXXXXXXXX CETFHLQSGTG LRFWPSLL DAAQRRLFEELTV+PDL PLDPK G S SGNPG RED AARGRWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILA A AAA VD GYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKD QKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAKEERE+RQSP+E R+AKALSPLLLSWSGQG K SS SL TG++GG GSI GGR SSLLTS GRINLTFRRVKEGV
Sbjct: 12 KRGRASRPNEQVGAKRRWSGSSSXXXXXXXXXXXXXCETFHLQSGTGKLRFWPSLLTDAAQRRLFEELTVDPDLRPLDPKAGSSXXXXXXXXXXSGNPGLREDGAARGRWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAAAGAAAGVDPGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDHAQKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAKEEREVRQSPQERREAKALSPLLLSWSGQGGKESS-SLKTGESGGNGSITGGRVGSSLLTSSAGARGGRINLTFRRVKEGV 348
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: Fe2OG (dioxygenase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5J9B1_9PHAE) HSP 1 Score: 231 bits (589), Expect = 8.290e-73 Identity = 123/150 (82.00%), Postives = 133/150 (88.67%), Query Frame = 1
Query: 565 MGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAKEERELRQSPEEIRKAKALSPLLLSWSGQGSKASSTSLGTGDTGGKGSIAGGRGHSSLLTSXXXXXXGRINLTFRRVKEGV 1014
MGWHSDDEKELEKGAAIASVSLGAGRRF+LR +KD+TQK+EF+LGGGSLLLMEGSTQEHWQHRVPKRTAKEERE+ QSP+E RKAKALSPLLLSWSGQG K S SL TG++GG GSIAGG G SSLLTS GRINLTFRR+KEGV
Sbjct: 1 MGWHSDDEKELEKGAAIASVSLGAGRRFELRGRKDRTQKMEFVLGGGSLLLMEGSTQEHWQHRVPKRTAKEEREILQSPQERRKAKALSPLLLSWSGQGGKVLS-SLNTGESGGNGSIAGGPGGSSLLTSSAGARGGRINLTFRRIKEGV 149
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: alpha-ketoglutarate-dependent (dioxygenase AlkB n=2 Tax=Pedobacter TaxID=84567 RepID=UPI001BDADC66) HSP 1 Score: 155 bits (393), Expect = 1.130e-42 Identity = 78/145 (53.79%), Postives = 93/145 (64.14%), Query Frame = 1
Query: 328 WMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPK 762
W Q PIK+FGRE+ QPR T FYG GV+Y YSG T+ ATPW +L + E+ + FN LLN YRDG DYMGWH D+EK L K IASVS GA R FQ R KDK V L GSLL+M+G TQ++W+HR+PK
Sbjct: 43 WRQEPIKMFGREVLQPRFTAFYGDDGVNYTYSGITMYATPWTAT-----LLRIKESIEMMLETKFNACLLNHYRDGKDYMGWHRDNEKNLGKFPVIASVSFGASRIFQFRNYKDKLPIVSIELTHGSLLIMKGGTQQYWEHRLPK 182
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: alpha-ketoglutarate-dependent (dioxygenase AlkB n=1 Tax=Muricauda sp. SCSIO 65647 TaxID=2908843 RepID=UPI001F284D08) HSP 1 Score: 152 bits (384), Expect = 2.390e-41 Identity = 80/149 (53.69%), Postives = 96/149 (64.43%), Query Frame = 1
Query: 328 WMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPKRTAK 774
W Q I LFG+ PQPRLT +G G SY YS T++ P+ +E+LA+ + + F LLN YRDG D GWHSDDEKEL K IASVSLGA R F LR KKDK+QK + +L GSLLLM+G TQ HWQH++PK TAK
Sbjct: 43 WQQDDITLFGKTYPQPRLTALHGNNGKSYSYSNVTMKPKPFT-----EELLAIKQKVETMTNVAFTTCLLNLYRDGRDSNGWHSDDEKELGKNPVIASVSLGAERYFHLRYKKDKSQKQKLLLQHGSLLLMQGETQHHWQHQLPK-TAK 185
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: alpha-ketoglutarate-dependent (dioxygenase AlkB n=1 Tax=Ideonella sakaiensis (strain NBRC 110686 / TISTR 2288 / 201-F6) TaxID=1547922 RepID=UPI000B20FE87) HSP 1 Score: 153 bits (387), Expect = 3.200e-41 Identity = 77/148 (52.03%), Postives = 96/148 (64.86%), Query Frame = 1
Query: 328 WMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTG-YFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPKRT 768
W Q I+L+G+ +P PRLT +YG G +Y YSG T + PW+ E L E D G FN +LLNWYRDGAD++ WHSDDE+EL + IAS + GA R F +RRK DK+QKV F L G+LLLM G+ Q HW+H VPKRT
Sbjct: 89 WKQDNIRLYGKTVPLPRLTAWYGDEGRNYTYSGITSKPNPWN------EGLLYIRRLVEQDCGAQFNSLLLNWYRDGADHLSWHSDDERELGRNPVIASANFGAERDFVIRRKDDKSQKVVFPLRHGTLLLMSGALQHHWEHAVPKRT 230
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: Alpha-ketoglutarate-dependent (dioxygenase AlkB n=2 Tax=Chitinophaga caeni TaxID=2029983 RepID=A0A291R0S7_9BACT) HSP 1 Score: 151 bits (381), Expect = 6.670e-41 Identity = 77/145 (53.10%), Postives = 92/145 (63.45%), Query Frame = 1
Query: 328 WMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPK 762
W +PIK+FG+EI QPRLT FYG G SY YSG A PW PA+ I E A FNCVL N YRDG D MGWH D+E+ L IASVSLGA R FQ+R K+ ++ F LG GSLL+M G TQ++W+H+VPK
Sbjct: 40 WKHKPIKIFGKEIMQPRLTAFYGDPGTSYTYSGLQQAAIPWH--PALSGIKRKIETACPEP---FNCVLANLYRDGQDSMGWHRDNEESLGACPTIASVSLGASRSFQMRDYATKSTRLSFELGNGSLLIMSGETQQYWEHQVPK 179
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: Alpha-ketoglutarate-dependent (dioxygenase AlkB n=1 Tax=Motiliproteus coralliicola TaxID=2283196 RepID=A0A369WSZ1_9GAMM) HSP 1 Score: 150 bits (379), Expect = 1.620e-40 Identity = 78/147 (53.06%), Postives = 93/147 (63.27%), Query Frame = 1
Query: 328 WMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPKRT 768
W Q I+LFGRE P PRL +YG G+ YRYSG +L A W +LA+ + + FN VL N YR+G D MGWH+DDE EL IAS+SLG R FQLRR+ D TQ+ E +L GSLLLM GSTQ HWQH +PKRT
Sbjct: 48 WRQDRIRLFGRETPIPRLQAWYGDPGLHYRYSGLSLYAQGWP-----DPLLALKQQLEQQTGQRFNAVLANLYRNGVDSMGWHADDEPELGPNPVIASLSLGQPRPFQLRRRDDPTQRYELLLEHGSLLLMAGSTQHHWQHALPKRT 189
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: Alkylated (DNA repair protein AlkB n=1 Tax=uncultured Campylobacterales bacterium TaxID=352960 RepID=A0A6S6S8X7_9PROT) HSP 1 Score: 150 bits (380), Expect = 2.100e-40 Identity = 71/146 (48.63%), Postives = 95/146 (65.07%), Query Frame = 1
Query: 328 WMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPKR 765
W + IK++G+E+ QPRLT +YG TGV+Y YSG TL W+ +++L + + ++ FN VLLNWYRDG DYM WH+DDEKEL IAS+S G R F LR+ D +QK+ L GSLL+M+G Q HW+H +PKR
Sbjct: 69 WQSQKIKIYGKEVIQPRLTSWYGDTGVTYSYSGITLYPNKWN-----KKLLYIKKQIEKITDKTFNSVLLNWYRDGEDYMNWHADDEKELGTNPVIASISFGKTRDFVLRQNNDSSQKITIPLTHGSLLIMQGEIQHHWKHCLPKR 209
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: Alpha-ketoglutarate-dependent (dioxygenase AlkB n=1 Tax=Gramella aestuarii TaxID=1028746 RepID=A0A7M3SXN3_9FLAO) HSP 1 Score: 149 bits (377), Expect = 2.260e-40 Identity = 80/146 (54.79%), Postives = 96/146 (65.75%), Query Frame = 1
Query: 325 RWMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPK 762
+W Q IKLFGREI QPRLT +G G SYRYSG LE P P ++E+ E ++ FN L N YRDGAD MGWH+DDEKEL K IASVSLGA R F L+ K DKT + + L GSLL+M+GSTQE W+H++PK
Sbjct: 37 QWKQEKIKLFGREILQPRLTALFGEDGKSYRYSG--LEMHPQPFPPELEEVRRKCEKYSDTS---FNVCLANLYRDGADSMGWHADDEKELGKNPVIASVSLGAERIFHLKHKIDKTARHKIRLQHGSLLIMKGSTQEFWKHQLPK 177
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Match: Alpha-ketoglutarate-dependent (dioxygenase AlkB n=2 Tax=Microcoleus sp. FACHB-SPT15 TaxID=2692830 RepID=UPI001781388C) HSP 1 Score: 149 bits (377), Expect = 3.120e-40 Identity = 75/145 (51.72%), Postives = 95/145 (65.52%), Query Frame = 1
Query: 328 WMQRPIKLFGREIPQPRLTCFYGRTGVSYRYSGKTLEATPWDGVPAIQEILAVAEAAAEVDTGYFNCVLLNWYRDGADYMGWHSDDEKELEKGAAIASVSLGAGRRFQLRRKKDKTQKVEFILGGGSLLLMEGSTQEHWQHRVPK 762
W Q I ++GR +PQPRLT +YG G+SY YSG T+ +PW + ++ A AEA + V FN VLLN YRDG D MGWHSDDE EL +G I S+SLG RRF LR + +K K + L GS LLM+G+TQ +WQH +PK
Sbjct: 38 WRQDWITIYGRSMPQPRLTAWYGNPGISYTYSGITMHPSPW--THTLLDLKAKAEAVSGV---VFNSVLLNLYRDGNDSMGWHSDDEPELGQGPVIGSLSLGGTRRFMLRHRAEKGLKHQLELTSGSFLLMQGTTQHYWQHHIPK 177 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig743.15606.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig743.15606.1 >prot_E_fasciculatus_S2_contig743.15606.1 ID=prot_E_fasciculatus_S2_contig743.15606.1|Name=mRNA_E_fasciculatus_S2_contig743.15606.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=339bp MSLAHRKRGRPSPPSEQVGAKRRRSSSSSQPKAPAATATCSCETFHLQSGback to top mRNA from alignment at E_fasciculatus_S2_contig743:21806..24576- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig743.15606.1 ID=mRNA_E_fasciculatus_S2_contig743.15606.1|Name=mRNA_E_fasciculatus_S2_contig743.15606.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2771bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig743:21806..24576- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig743:21806..24576- >mRNA_E_fasciculatus_S2_contig743.15606.1 ID=mRNA_E_fasciculatus_S2_contig743.15606.1|Name=mRNA_E_fasciculatus_S2_contig743.15606.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1017bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig743:21806..24576- (Ectocarpus fasciculatus EfasUO2)back to top |