mRNA_E_fasciculatus_S2_contig7429.15603.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K2C6_9PHAE) HSP 1 Score: 419 bits (1077), Expect = 6.220e-147 Identity = 217/246 (88.21%), Postives = 225/246 (91.46%), Query Frame = 1
Query: 1 MGIELAQWWPAGRWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLVGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGAGFLFLGWVFRLSPPSSAGNSSPSSSS---------QLPLILLGGVSGLAGS 711
MGIELAQWWP GRWG+ALV+ASYMS SGLKKKSLNRSGAMAAFFVGLVSLGLSLR GLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFAT+LAVYHTVVTG GDSLV FEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSL+GTVASAAAGVV+GAGF+ GWVFRLSPPS AG+SSP QLPL+LLGGVSGLAGS
Sbjct: 1 MGIELAQWWPLGRWGVALVIASYMSVSGLKKKSLNRSGAMAAFFVGLVSLGLSLRFGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVYHTVVTGAGDSLVDFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASAAAGVVMGAGFVCFGWVFRLSPPSPAGHSSPXXXXXXXXXXXXXQLPLVLLGGVSGLAGS 246
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMW9_ECTSI) HSP 1 Score: 363 bits (933), Expect = 5.510e-126 Identity = 184/196 (93.88%), Postives = 189/196 (96.43%), Query Frame = 1
Query: 1 MGIELAQWWPAGRWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLVGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGAG 588
MGIELAQWWP GRWG+A VLASYMS SGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFAT+LAV+HTVVTG GDSLV FE DPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSL+GTVAS AAGVV+GAG
Sbjct: 1 MGIELAQWWPLGRWGVASVLASYMSVSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATILAVHHTVVTGAGDSLVDFESDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLMGTVASVAAGVVMGAG 196
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V002_9STRA) HSP 1 Score: 230 bits (586), Expect = 7.010e-72 Identity = 136/228 (59.65%), Postives = 159/228 (69.74%), Query Frame = 1
Query: 37 RWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSL---VGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGAGFLFLGWVFRLSPPSSAGNSSPSSSSQLPLILLGGVSGLAGS 711
R GLAL + Y+ SGLKK+SL+RSGA AAFFVGLVSL +S RLGLTLILFYKSSSILTKVG ++KA+L D + GQR A QVLSCS A V+AV + G D L V + P LLCAYLG YACC GDTWSSELGVLS++PP LIT+PW+TVP GTNGG+S +GT+A+ AAGVVIGAGFL GW+ +P L LI GG+ GL GS
Sbjct: 12 RCGLALAASLYLVFSGLKKRSLSRSGACAAFFVGLVSLSISARLGLTLILFYKSSSILTKVGQKKKAQLDDHHVTDGQRTATQVLSCSGIACVVAVIMYYLEG-EDMLAMGVNYSSHPTTSFLLCAYLGHYACCNGDTWSSELGVLSRSPPILITQPWRTVPAGTNGGVSTMGTLAAGAAGVVIGAGFLLFGWM----------QGAPQDGQYL-LIPFGGMCGLLGS 227
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RII1_9STRA) HSP 1 Score: 197 bits (501), Expect = 3.480e-59 Identity = 119/222 (53.60%), Postives = 137/222 (61.71%), Query Frame = 1
Query: 46 LALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLVGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGAGFLFLGWVFRLSPPSSAGNSSPSSSSQLPLILLGGVSGLAGS 711
+A +A + GL+KKSL+ SGA AA VG +S S R GL LI FY+SSS LTK ERK +L YKEGGQR A QV SCSL ATV+AV + G D V P+ ALLCAYLG YACC GDTW+SELG L PRL+ PW+ VP GTNGGMS LGT AS A G LF+G VF + P +SSP + SQLPLI LG G GS
Sbjct: 8 VAAAVAGLLGWRGLRKKSLSPSGAAAAVLVGFLSFLASFRFGLVLIAFYQSSSSLTKFQGERKRRLEAGYKEGGQRDAEQVFSCSLLATVMAVVFLLTQG-EDQPVDSAAAPMRSALLCAYLGHYACCNGDTWASELGTLDSGLPRLVLAPWRKVPKGTNGGMSFLGTAASLAGG-------LFIGLVFVVCGP----HSSPGAPSQLPLIALGAAGGFVGS 217
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=K8YV45_NANGC) HSP 1 Score: 194 bits (493), Expect = 1.790e-57 Identity = 102/197 (51.78%), Postives = 138/197 (70.05%), Query Frame = 1
Query: 46 LALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLVGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWK-TVPPGTNGGMSLLGTVASAAAGVVIGAGFLFLGWVFRLSPPSS 633
+A + A+ +S GL+K SL++SGA+AA+ VG +S+G SLR G +ILFY+SSS+LT+ E KA L +D+K+GGQR AAQVL+CS T++AV + G D + FE PL LLCAY+G YACC GDTW+SE+G+LS + PRL+T ++ VP GTNGGMSL GT+AS A G +IG G LG+V + +S
Sbjct: 33 MATIFATTLSYRGLRKHSLSKSGALAAWVVGFLSMGASLRFGALMILFYQSSSMLTRYRCETKALLEEDHKQGGQRSAAQVLACSFLGTLIAVAFVFLLGPDDLPLNFEASPLRSRLLCAYVGHYACCNGDTWASEIGILSPSSPRLVTAGFRRVVPRGTNGGMSLTGTLASIAGGALIGTGHSILGFVLGMPDDAS 229
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S1GFR5_9STRA) HSP 1 Score: 186 bits (472), Expect = 7.390e-54 Identity = 110/229 (48.03%), Postives = 145/229 (63.32%), Query Frame = 1
Query: 46 LALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLVGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGA--GFLFLGWV-----FRLSPPSSAGNSSPSSSSQLPLILLGGVSGLAGS 711
+ L+LA +S+SG KK+SL++SGA++AF V SL S R GLTL+ FY +SS LT+VG + K KL + + EGG+RGA+QV +CSL A + A ++ G L+ L L AY+ F+ACCAGDTW+SELGVLSK+ PRLI KPWK VPPGTNGG+S +G ASAA G ++G G L G + F L P A +S+ L L L+G + G GS
Sbjct: 77 IGLLLAQKISNSGYKKQSLSKSGAISAFLVASFSLATSFRNGLTLLAFYWTSSKLTRVGSKIKGKLEEGHTEGGERGASQVFACSLIAVLCACVRRILVGNDGPLLSTSVGLLGDQLTLAYVAFFACCAGDTWASELGVLSKSKPRLIIKPWKQVPPGTNGGISFVGLAASAAGGTLMGLIHGVLVPGGIASMLPFNLPPMLGAISSAALKKEVLILSLVGFIGGFGGS 305
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Uncharacterized (protein (Fragment) n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1C669_EMIHU) HSP 1 Score: 181 bits (459), Expect = 7.680e-53 Identity = 98/189 (51.85%), Postives = 127/189 (67.20%), Query Frame = 1
Query: 22 WWPAGRWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLVGFEPDPLAG-ALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGA 585
W R ++A +++ GLK+ SL R GA AAF VGL+S S+R G+TL+ FYKS S+LT+VG + K K+ + Y GQRGAAQVL+CS AV + G D+ + F AG L AY+ F+ACCAGDTW+SELGVLS +PPR+IT+PW+T P GTNGG+S+LGT+ASAA G IGA
Sbjct: 2 WEQLARTSAGTLIAYKLATGGLKRGSLQRDGAAAAFVVGLLSFSCSIRCGVTLLFFYKSGSMLTRVGADVKRKVEEGYAAEGQRGAAQVLACSAVGVAAAVLRRALVG-PDAPLDFSDLASAGNRLTLAYVSFFACCAGDTWASELGVLSASPPRIITQPWRTAPAGTNGGVSVLGTLASAAGGACIGA 189
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C455_HYAAE) HSP 1 Score: 176 bits (447), Expect = 4.000e-51 Identity = 110/228 (48.25%), Postives = 139/228 (60.96%), Query Frame = 1
Query: 28 PAGRWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLVGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGAGFLFLGWVFRLSPPSSAGNSSPSSSSQLPLILLGGVSGLAGS 711
P R +A +LA ++ GLKK+SL+ SGA AA VG +L R G+ L+ FY S S LTKV K +L +YK+GGQR A QVL+CSL AT++AVY V G D + FE P + LL +Y+G YACCA DTW+SELGVLSK+ PRLI WK VPPGTNGG+S+LG SA G IGA + S S ++QL ++ LG V+GL GS
Sbjct: 4 PLSRVLVAALLAGWLGRRGLKKQSLDVSGAAAACCVGFFTLASGYRFGVLLLGFYFSGSKLTKVRASVKQQLDANYKQGGQRSARQVLACSLVATLIAVYFVVRFGHDDVALDFESAPESSFLLASYIGHYACCAADTWASELGVLSKSEPRLIMT-WKRVPPGTNGGVSVLGLAVSALGGAFIGALYF--------------ATSLLSGTAQLHVVTLGAVTGLFGS 216
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C9F1_PYTOL) HSP 1 Score: 175 bits (444), Expect = 1.370e-50 Identity = 110/226 (48.67%), Postives = 141/226 (62.39%), Query Frame = 1
Query: 37 RWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDS-LVGFEPDPLAGALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIGAGFLFLGWVFRLSPPSSAGNSSPSSSSQLPLILLGGVSGLAGS 711
R +A LA ++ GLKK+SL+ SGA+AAF VG S+ R G+ LI FY S S LT V K++L +YK GGQR A QVL+CSL ATV+AVY+ + G D+ + F+ P+ ALL AY+G YACCA DTW+SELGVLS P LIT +K VPPGTNGG+SLLGT AS A G F+G ++ L + G +QL ++ G V+GL GS
Sbjct: 7 RLAVAAALALLLARRGLKKQSLDVSGAVAAFLVGFGSMAAGYRFGVLLIGFYFSGSKLTNVRASVKSRLDANYKVGGQRSAPQVLACSLIATVIAVYYAFLFGESDTQAIDFKAAPVESALLTAYIGHYACCAADTWASELGVLSTHDPVLITS-FKRVPPGTNGGVSLLGTAASTAGGA-------FIGLLYYLVSLLTGG-------AQLQVVPFGAVAGLIGS 217
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Thalassiosira oceanica TaxID=159749 RepID=K0RRU1_THAOC) HSP 1 Score: 179 bits (454), Expect = 7.500e-50 Identity = 100/188 (53.19%), Postives = 128/188 (68.09%), Query Frame = 1
Query: 37 RWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLGLSLRLGLTLILFYKSSSILTKVGFERKAKLTDDYKEGGQRGAAQVLSCSLFATVLAVYHTVVTGVGDSLV---GFEPDPLAG---ALLCAYLGFYACCAGDTWSSELGVLSKTPPRLITKPWKTVPPGTNGGMSLLGTVASAAAGVVIG 582
R + LVLA +S SGL+K SL++ GA AAF V +SLG S R GLTL+ FY +SS LT+VG +RK L + EGG RGA QVL+CS A+ V G +L+ P P A AL AY+GF+ACCAGDTW+SE+GVLS++ PR + +PW++VPPGTNGG+SLLG VASAA G+V+G
Sbjct: 59 RTSVGLVLARKISRSGLRKGSLSKDGAAAAFAVASLSLGTSWRNGLTLLTFYWTSSRLTRVGSKRKRTLEEGVSEGGNRGAGQVLACSAIGVACALARRAVVGRDTALLTAAATSPAPHAAIGDALTLAYVGFFACCAGDTWASEIGVLSRSRPRSVLRPWRSVPPGTNGGVSLLGLVASAAGGLVVG 246 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7429.15603.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7429.15603.1 >prot_E_fasciculatus_S2_contig7429.15603.1 ID=prot_E_fasciculatus_S2_contig7429.15603.1|Name=mRNA_E_fasciculatus_S2_contig7429.15603.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=237bp MGIELAQWWPAGRWGLALVLASYMSSSGLKKKSLNRSGAMAAFFVGLVSLback to top mRNA from alignment at E_fasciculatus_S2_contig7429:2..3294- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7429.15603.1 ID=mRNA_E_fasciculatus_S2_contig7429.15603.1|Name=mRNA_E_fasciculatus_S2_contig7429.15603.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3293bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7429:2..3294- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7429:2..3294- >mRNA_E_fasciculatus_S2_contig7429.15603.1 ID=mRNA_E_fasciculatus_S2_contig7429.15603.1|Name=mRNA_E_fasciculatus_S2_contig7429.15603.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=711bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7429:2..3294- (Ectocarpus fasciculatus EfasUO2)back to top |