prot_E_fasciculatus_S2_contig7428.15601.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7428.15601.1
Unique Nameprot_E_fasciculatus_S2_contig7428.15601.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length253
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7428.15601.1 vs. uniprot
Match: D7FLT5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FLT5_ECTSI)

HSP 1 Score: 369 bits (948), Expect = 1.920e-127
Identity = 197/247 (79.76%), Postives = 207/247 (83.81%), Query Frame = 0 
Query:    1 MEREQAVREQVANRGLMEDSWVPTDASEQQLDDSFHPDTFVNVGNFLNSQETSERARSTSETSCQTPPPATVASVGTVTHVVDPSAPLTSLLSGGSRVSRIVLGLLAVVVVLLGTNACSYNQGRAWKVHTTLYVCYEQWLMWYGMPVFSRDPQAETSALREKVDKLEAAARKSASKPTWPSSTSPPTCPGSQLIDTCWFKVGWGDCANEALEDPIKPIEDAIRFAMDSATGVIGVVTETFANDMSQV 247
            MEREQAVREQVANRGLM DSWVPTDASEQQLDDSFHPDTFVNVGNFL+SQE+SERARSTSETS QTPPPAT+ASV TVTHVVDPSAPLTSLLSGGSR  RIVLGLLAVVV+LLGTNA SYNQ RAWK                          AETS+LREKV KLEAAAR SASKPTW +STS  TCPGSQLIDTCWFKVGWGDCANEALEDP+KPIEDA RFA+DSA+GVIG VTETFA+DMSQV
Sbjct:    1 MEREQAVREQVANRGLMGDSWVPTDASEQQLDDSFHPDTFVNVGNFLSSQESSERARSTSETSSQTPPPATIASVSTVTHVVDPSAPLTSLLSGGSRAGRIVLGLLAVVVMLLGTNAYSYNQSRAWK--------------------------AETSSLREKVGKLEAAARTSASKPTWSTSTSSTTCPGSQLIDTCWFKVGWGDCANEALEDPVKPIEDAFRFALDSASGVIGAVTETFASDMSQV 221
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7428.15601.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FLT5_ECTSI1.920e-12779.76Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 98..118
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 119..252
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..97
NoneNo IPR availableTMHMMTMhelixcoord: 98..120

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7428contigE_fasciculatus_S2_contig7428:503..3314 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7428.15601.1mRNA_E_fasciculatus_S2_contig7428.15601.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7428 503..3314 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7428.15601.1 ID=prot_E_fasciculatus_S2_contig7428.15601.1|Name=mRNA_E_fasciculatus_S2_contig7428.15601.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=253bp
MEREQAVREQVANRGLMEDSWVPTDASEQQLDDSFHPDTFVNVGNFLNSQ
ETSERARSTSETSCQTPPPATVASVGTVTHVVDPSAPLTSLLSGGSRVSR
IVLGLLAVVVVLLGTNACSYNQGRAWKVHTTLYVCYEQWLMWYGMPVFSR
DPQAETSALREKVDKLEAAARKSASKPTWPSSTSPPTCPGSQLIDTCWFK
VGWGDCANEALEDPIKPIEDAIRFAMDSATGVIGVVTETFANDMSQVLVG
QV*
back to top