mRNA_E_fasciculatus_S2_contig7390.15570.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LD99_ECTSI) HSP 1 Score: 555 bits (1430), Expect = 2.420e-195 Identity = 289/341 (84.75%), Postives = 299/341 (87.68%), Query Frame = 3
Query: 3 DVADVGSVVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIANARAVAQDLEYKRQPPITTTPGSRDGTSPLPSDDPADVLSTPPESENSCSATTTLSIPNGGGKTEDVPACPKSARRRKHGDDTGLKQAEAPKDSTVNVAASKPDDRELSRTLCGLDGGGSKGCWRVVELLFSESEEELLQWRRMAGGVGTTGGPLRAVLEGGPEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGEALMTFEQRRGNVDGFFGPPRFGGEESGCCWDPGEEVDFAEGVDAGEVLKDAAKAARVRMYRMRRSGSGVP 1025
DVADVGS+VWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGL SKLLPTLIANARA AQDLEY RQPP TTPGSRDGTS LP D+PADVLSTPPES+N+CS TTT SI GGK EDVP C KSARRRK GDD GL Q +APKDSTVNVAASKPDDRELS T+C LDGGG KGCWRVVELLFSESEE+LL+WRRMA G GTTGGPLRAV EG PEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGEALMTFEQRRGNVDGFFGPPRFGGEE+GCCW GEEVDFAEGVDAGEVL+DAAKAARVRMYRMRRSGSG P
Sbjct: 35 DVADVGSIVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGL--------------SKLLPTLIANARANAQDLEYSRQPP--TTPGSRDGTSTLPCDEPADVLSTPPESDNTCSVTTTPSIAKDGGKAEDVPVCRKSARRRKGGDDEGLNQVDAPKDSTVNVAASKPDDRELSTTMCCLDGGGIKGCWRVVELLFSESEEKLLRWRRMADGGGTTGGPLRAVPEGDPEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGEALMTFEQRRGNVDGFFGPPRFGGEETGCCWGHGEEVDFAEGVDAGEVLRDAAKAARVRMYRMRRSGSGGP 359
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Putative (methyltransferase-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAM0_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 8.640e-19 Identity = 51/72 (70.83%), Postives = 57/72 (79.17%), Query Frame = 3
Query: 3 DVADVGSVVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIANARA 218
D DVGS+VWDAE++LAH+LD L GM VLELGAGTGLAG+VAARLGA VVLTDQ+KLLP L NA A
Sbjct: 59 DFGDVGSIVWDAEVVLAHHLDATVSKSLRGMSVLELGAGTGLAGIVAARLGAHVVLTDQAKLLPQLQRNADA 130
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Uncharacterized (protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YJ95_9STRA) HSP 1 Score: 76.3 bits (186), Expect = 3.340e-12 Identity = 38/68 (55.88%), Postives = 48/68 (70.59%), Query Frame = 3
Query: 3 DVADVGSVVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIA 206
D+A VG VWDA ++L+HYLD + L G R++ELGAGT L +V+ARLGA VV TD S +LP IA
Sbjct: 35 DIAHVGGTVWDAGVVLSHYLDSLGSAALQGKRIIELGAGTALPSIVSARLGAVVVATDMSDVLPYTIA 102
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Hypothetical (protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQV4_9STRA) HSP 1 Score: 73.6 bits (179), Expect = 5.280e-11 Identity = 37/61 (60.66%), Postives = 45/61 (73.77%), Query Frame = 3
Query: 27 VWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIAN 209
VWDAE +L H+L + YG L G RVLELGAGTGL+G+VAARLGA V LT+ + +P L N
Sbjct: 6 VWDAETILTHHLVEEYGMALQGCRVLELGAGTGLSGIVAARLGADVTLTEVEEAVPLLERN 66
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Uncharacterized (protein n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QEG4_SAPDV) HSP 1 Score: 72.4 bits (176), Expect = 7.160e-11 Identity = 35/64 (54.69%), Postives = 45/64 (70.31%), Query Frame = 3
Query: 3 DVADVGSVVWDAEILLAHYLDQAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLP 194
D+A VG VWDA ++L+HYLD + G R++ELGAGT L ++AARLGA VV TD S +LP
Sbjct: 35 DIAHVGGTVWDAGVVLSHYLDTLGSIAMKGKRLVELGAGTALPSIIAARLGADVVATDMSDVLP 98
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Methyltransferase (family protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HYS2_KLENI) HSP 1 Score: 73.2 bits (178), Expect = 3.150e-10 Identity = 84/281 (29.89%), Postives = 128/281 (45.55%), Query Frame = 3
Query: 27 VWDAEILLAHYLDQAYGS---RLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIANARAVAQDLEYKRQPPITTTPGSRDGT--SPLPSDDPA---DVLSTPPESENSCSATTTLSIPNGGGKTEDVPACPKSAR-RRKHGDDTGLKQAEAPKDSTVNVAASKPDDRE----LSRTLCGLDGGGSKGCWRVVELLFSESEEELLQWRRM----AGGVGTTGGPLR-AVLEGGPEGDSHDGLFDLVVAADVVYLNDLWDAMAFTIKALTKPSGE 815
+W A L HYL+ AYG+ RL G+RVLELGAGTGL G+ AA+LGA V+LTD LP ++ N RA + G G +PL +D+PA + + + N SAT T +P+ + R + DD GL Q S + + + + + + G+D G + + L ++ + R+ AG V PL V E G FDLV+A+DV+Y + L++ + +++ LT+P E
Sbjct: 118 LWPAAEALCHYLETAYGTISGRLQGLRVLELGAGTGLVGIFAAQLGADVILTD----LPGVLENLRAN-----------VALNQGRAQGVKGNPLIADNPAVNGNHVVLEEDGMNRISATET---------GNSIPSAKATVRFSQTETDDEGLVQMCTLAGSRIGLTCETETETQPILGKEKGVSGIDALGHEAEYEAGCHLANDQGKTSRSMHRISSKSAGSVSVE--PLSWGVREDVDALVKRTGGFDLVLASDVIYYDTLFEPLLQSLRWLTEPGVE 372
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Methyltransferase-like (protein 21D (Fragment) n=3 Tax=Parasteatoda tepidariorum TaxID=114398 RepID=A0A2L2YAX9_PARTP) HSP 1 Score: 69.7 bits (169), Expect = 4.890e-10 Identity = 37/79 (46.84%), Postives = 55/79 (69.62%), Query Frame = 3
Query: 6 VADVGSVVWDAEILLAHYLD--QAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIANARAVAQDLE 236
V DVG VVWDA I++ YLD Q + + +SG V+++G+GTG+AGL AA LGA V+LTD +++P L N ++ + L+
Sbjct: 27 VGDVGCVVWDAGIVMGKYLDYQQKFVNSMSGKMVVDIGSGTGVAGLFAAALGAKVILTDLPEIIPILEKNIQSNCKALK 105
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Valosin (containing protein lysine methyltransferase n=2 Tax=Denticeps clupeoides TaxID=299321 RepID=A0A8C4AR50_9TELE) HSP 1 Score: 69.3 bits (168), Expect = 8.110e-10 Identity = 41/75 (54.67%), Postives = 48/75 (64.00%), Query Frame = 3
Query: 12 DVGSVVWDAEILLAHYLDQAYGSRLSGM------RVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIANARA 218
DVG VVWDA I+LA YL+ + + G+ VLELGAGTGL G++AA LGA V LTD LLP L N RA
Sbjct: 35 DVGCVVWDAAIVLAKYLETQFFNPQDGVCTWSSKNVLELGAGTGLVGIMAATLGAKVTLTDLEDLLPLLHLNIRA 109
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Uncharacterized (protein n=2 Tax=Pteromalinae TaxID=272242 RepID=A0A7M7LJE7_NASVI) HSP 1 Score: 68.9 bits (167), Expect = 9.950e-10 Identity = 39/73 (53.42%), Postives = 48/73 (65.75%), Query Frame = 3
Query: 6 VADVGSVVWDAEILLAHYLDQAYGSR--LSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIANARA 218
+ DV V+WDA ++LA YLD+ L G RVLELGAG G AG+VAA GA VVLTD + +LP L N +A
Sbjct: 28 IGDVSCVIWDAALVLAKYLDKTSQKNKWLKGKRVLELGAGLGCAGIVAACFGAHVVLTDLATVLPMLEKNIKA 100
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Match: Protein-lysine (methyltransferase METTL21D n=1 Tax=Araneus ventricosus TaxID=182803 RepID=A0A4Y2P4U7_ARAVE) HSP 1 Score: 68.9 bits (167), Expect = 1.060e-9 Identity = 42/89 (47.19%), Postives = 55/89 (61.80%), Query Frame = 3
Query: 6 VADVGSVVWDAEILLAHYLD--QAYGSRLSGMRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTL---------IANARAVAQDLEY 239
V DVGSVVWDA I+L YLD Q L+G ++++G+GTG+AGL AA LGA V+LTD +++P L I A AQ LE+
Sbjct: 30 VGDVGSVVWDAGIVLGKYLDNLQKTNDALTGKIIIDIGSGTGVAGLFAAVLGAEVILTDLPEVIPLLEKNIEQNKNIIKGSATAQILEW 118 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7390.15570.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7390.15570.1 >prot_E_fasciculatus_S2_contig7390.15570.1 ID=prot_E_fasciculatus_S2_contig7390.15570.1|Name=mRNA_E_fasciculatus_S2_contig7390.15570.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=312bp MRVLELGAGTGLAGLVAARLGASVVLTDQSKLLPTLIANARAVAQDLEYKback to top mRNA from alignment at E_fasciculatus_S2_contig7390:3278..6020- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7390.15570.1 ID=mRNA_E_fasciculatus_S2_contig7390.15570.1|Name=mRNA_E_fasciculatus_S2_contig7390.15570.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2743bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7390:3278..6020- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7390:3278..6020- >mRNA_E_fasciculatus_S2_contig7390.15570.1 ID=mRNA_E_fasciculatus_S2_contig7390.15570.1|Name=mRNA_E_fasciculatus_S2_contig7390.15570.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=936bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7390:3278..6020- (Ectocarpus fasciculatus EfasUO2)back to top |