mRNA_E_fasciculatus_S2_contig7385.15563.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7385.15563.1
Unique NamemRNA_E_fasciculatus_S2_contig7385.15563.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: TauD (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNM9_9PHAE)

HSP 1 Score: 656 bits (1693), Expect = 7.090e-235
Identity = 357/425 (84.00%), Postives = 367/425 (86.35%), Query Frame = 1
Query:    1 QVDTFQVPNNLQVRNTSVVATATPRPPXXXXXXXXXXXXXXXSIATTTDRQAEVLRVSWGDSPAGPQDPG---EGPNTSTSTIPIDWLRRHCTSATARDLRRRHGGPADGPCIRPRPVLWGADVFSSNASDTPQXXXXXXXXXACMSYDDVMADGALDEPAXXXXXXXXXXXXXXXXX-GASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARVQR 1263
            QVDTFQVPNNLQVRN SV + ++P                      TTDRQA VLRVSWGD PAGPQD     EGPNT+TSTIPIDWLRRHCTSATARDLRRRHGGPADGP + PRPVLWGADVFS+    TPQ         ACMSY+DVMADGALDEP XXXXXXXXXXXXXXXX  GAS RLVDLIRS GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRA+EGGASIYVDGFAVAERLRAT+PEAFEFFS TSISYQCFDEGCHYMAEGPVFRLG  GEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLS IIRDPSLVARIVLEPGECVIL+N RALHGRESFKGRRRMVGCYLGMDEL SSARVQR
Sbjct:   24 QVDTFQVPNNLQVRNASVASPSSP-----------DDARGGDGSTATTDRQAHVLRVSWGDIPAGPQDTRDGKEGPNTNTSTIPIDWLRRHCTSATARDLRRRHGGPADGPGLHPRPVLWGADVFSAG---TPQQQQPP----ACMSYEDVMADGALDEPEXXXXXXXXXXXXXXXXAPGASPRLVDLIRSHGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAREGGASIYVDGFAVAERLRATSPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGALGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSKIIRDPSLVARIVLEPGECVILNNHRALHGRESFKGRRRMVGCYLGMDELESSARVQR 430          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: TauD (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLG7_ECTSI)

HSP 1 Score: 501 bits (1290), Expect = 4.530e-176
Identity = 250/279 (89.61%), Postives = 255/279 (91.40%), Query Frame = 1
Query:  427 MSYDDVMADGALDEPAXXXXXXXXXXXXXXXXXGASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARVQR 1263
            MSY+DVMADGALD+P                  GAS RLVDLIRS GVALVRGVPTDEKGTEALALR+GGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVA+RLRATNPEAFEFFS TSISYQCFDEGCHYMAEGPVFRLGP GEVVQVRYNDYDRAPLDYL NEDIDRFYEYHASLS+IIRDPSLVARIVLEPGECVILDN RALHGRESFKGRRRMVGCYLGMDELHSSARVQR
Sbjct:    1 MSYEDVMADGALDDPEAAGSSPPPAP-------GASPRLVDLIRSHGVALVRGVPTDEKGTEALALRIGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVADRLRATNPEAFEFFSRTSISYQCFDEGCHYMAEGPVFRLGPLGEVVQVRYNDYDRAPLDYLPNEDIDRFYEYHASLSEIIRDPSLVARIVLEPGECVILDNHRALHGRESFKGRRRMVGCYLGMDELHSSARVQR 272          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: TauD (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFJ6_9STRA)

HSP 1 Score: 271 bits (692), Expect = 7.500e-86
Identity = 135/236 (57.20%), Postives = 169/236 (71.61%), Query Frame = 1
Query:  550 LIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARV 1257
            ++R+ G+ LV G PT  +GTEALA R+G  +R TLYG GMWATSAE +  EE   D+AY+N  L  HTDC Y+ DPPG+QVFNCV  A +GG S YVDGFAVA  LR  +PEAFEFF+ T   Y C D+  H +A GPVF LG  G+VVQVR+NDYDRAPLD+L   DI+ FY++H  L+++IR  S + ++ L PG+ VI DN R +HGRE+F GRRRMVGCY+  D+  S ARV
Sbjct:    3 MLRAYGIVLVTGSPTTMEGTEALATRIG-VVRETLYG-GMWATSAEGA--EEAHNDTAYTNLALGAHTDCTYMIDPPGLQVFNCVAAAPKGGTSTYVDGFAVAAALREQDPEAFEFFARTPFKYFCHDKYHHLLAAGPVFTLGCGGQVVQVRHNDYDRAPLDHLPYGDIEAFYKHHGKLTELIRAESSILKLRLRPGDTVIADNHRTMHGREAFVGRRRMVGCYISRDDHESRARV 234          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C7S5_PYTOL)

HSP 1 Score: 209 bits (531), Expect = 1.220e-59
Identity = 102/232 (43.97%), Postives = 146/232 (62.93%), Query Frame = 1
Query:  565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
            G+ +V   P+    TE  + ++G  +  T+YG  MW T+ +    E+ + D+A +N  L  HTD  Y+ DPPG+Q+FNC+ +A EGG S YVD F VAERLR  NP AFEFF+ T + Y  +D   H     P+ +L   G +VQ R+NDYDRAPL +LS E+ + FY+YH  L  ++RDPS+  R+ L+ G+ +I+DNQR +H R++F G  R ++GCY+G  E  S  RV
Sbjct:  179 GLVMVHATPSSMDETEKFSRKIG-FVLETIYGT-MWTTNPQTE--EQEYNDTASTNIELLHHTDGTYMRDPPGLQIFNCIAQAGEGGDSRYVDAFHVAERLRRQNPAAFEFFTKTPLHYHHYDRDAHLATMEPIIQLDHAGNIVQFRHNDYDRAPLTHLSFEETELFYKYHGELLSLLRDPSMEFRVKLQVGQMIIVDNQRVMHARDAFSGGERALIGCYIGRTEYESRLRV 406          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WYB6_GLOUD)

HSP 1 Score: 207 bits (526), Expect = 8.800e-59
Identity = 102/232 (43.97%), Postives = 147/232 (63.36%), Query Frame = 1
Query:  565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGR-RRMVGCYLGMDELHSSARV 1257
            G+ ++   P+    TEA + ++G  LR T+YG  MW T+ +    ++ + D+A +N  L  HTD  Y+ DPPG+Q+FNCV +A EGG S Y+D F V E+LRA NP A++F STT ++Y  FD   H     P+ R+     VVQ R+NDYDRAPL +LS +D+ RFYEYH  L  ++RDP++   + L  GE +++DNQR +HGR +F G  R ++G Y+G +E  S  RV
Sbjct:  190 GLVMISNTPSSMDETEAFSRKIGFVLR-TIYGE-MWTTNPQTE--DQEYNDTASTNMELLHHTDGTYMRDPPGLQIFNCVAQAGEGGESRYIDAFHVVEKLRAQNPVAYKFLSTTPLNYHHFDNDAHMATMEPIIRVDHADNVVQFRHNDYDRAPLTHLSFDDVQRFYEYHRELMTLMRDPTMETTVKLRVGEMIVVDNQRVMHGRNAFDGGDRALIGSYIGRNEYDSRLRV 417          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XF28_9STRA)

HSP 1 Score: 206 bits (524), Expect = 2.220e-58
Identity = 111/245 (45.31%), Postives = 152/245 (62.04%), Query Frame = 1
Query:  526 GASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
            G  A L+  +   G+ +V   P+    TE  + R+G  LR T+YG  MW T+ +++  E+ + D+A +N  L  HTD  Y+ DPPG+Q+FNCV +A EGG S YVD F  AERLRA +P AF F + T ++Y  FD   H  A  PV +L   G VVQVRYNDYDRAPL +L    +++FY +H +L  ++RD SL A + L  GE V++DNQR LHGR +F G  R ++G Y+G +E  S  RV
Sbjct:  187 GDLAPLMTDLYKYGLVMVTATPSSMAETERFSRRIGFVLR-TIYGE-MWTTNPQSA--EQEYNDTASTNLELLPHTDGTYMRDPPGLQIFNCVAQAGEGGESRYVDAFHAAERLRAQDPAAFRFLAATPVNYHHFDADAHLAAMEPVIKLDHAGHVVQVRYNDYDRAPLTHLPFAAVEQFYRHHRALVRVLRDASLEATLKLRVGEMVVVDNQRVLHGRAAFDGGERSLIGSYIGRNEYDSRLRV 427          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=2 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BN78_PYTIN)

HSP 1 Score: 204 bits (520), Expect = 8.180e-58
Identity = 102/232 (43.97%), Postives = 144/232 (62.07%), Query Frame = 1
Query:  565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
            G+ +V   P+    TE  + ++G  +  T+YG  MW T+ +    ++ + D+A SN  L  HTD  Y+ DPPG+Q+FNC+V+A EGG S YVD + V E+LR   P AF+F S T + YQ FD+  H     P+ +L   G VVQ R+NDYDRAPL +LS + +D FY +HA L  IIRDP++  R  L+ GE +I+DN R +H R++F G  R ++GCY+G  E  S  RV
Sbjct:  198 GIVMVHSTPSSMDETEKFSRKIG-FVMETIYGK-MWTTNPQTK--DQQYNDTASSNIELLHHTDGTYIRDPPGLQIFNCIVQAGEGGDSRYVDAYHVVEKLRRQFPAAFDFLSKTPLHYQTFDDDAHLTTMEPIIKLDHAGNVVQFRHNDYDRAPLTHLSFDQVDEFYRHHAELLKIIRDPAMEFRHKLQVGEMIIVDNHRVMHARDAFVGGERALIGCYIGRTEYESRLRV 425          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Uncharacterized (protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7J7L5_9STRA)

HSP 1 Score: 190 bits (483), Expect = 1.800e-52
Identity = 100/232 (43.10%), Postives = 136/232 (58.62%), Query Frame = 1
Query:  565 GVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKG-RRRMVGCYLGMDELHSSARV 1257
            G+  V G P     TE  + ++G  LR T+YG  MW T+       E + D+A +N  L  HTD  Y+ DPPG+Q+FNC+ +A EGG S Y+D F V E LR  NPEAF   S T + Y   D   H     P+ R+   G VVQ R+NDYDRAPL +LS E++D FY+ H  L +++R P +     L+ G+ +I+DNQR +HGR +F G  R ++GCY+G  E  S  RV
Sbjct:  190 GLVRVTGTPKTMDATEKFSTKIGFVLR-TIYGT-MWTTNPTND--NEDYNDTASTNLELLHHTDGTYILDPPGLQIFNCIAQAGEGGESRYIDSFHVVETLRKENPEAFRVLSQTPLPYFTVDRDAHLSTMEPLIRVDYAGNVVQFRHNDYDRAPLTHLSFEEVDAFYKAHRKLLEVMRRPEMEFCTKLQVGDMMIVDNQRVMHGRHAFNGGERALIGCYIGRTEYESRLRV 417          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A083_9STRA)

HSP 1 Score: 192 bits (487), Expect = 1.160e-51
Identity = 126/372 (33.87%), Postives = 178/372 (47.85%), Query Frame = 1
Query:  157 EVLRVSWGDSPAGPQDPGEGPNTSTSTIPIDWLRRHCTSATARDLRRRHGGPADGPCIR-PRPVLWGADVFSSNASDTPQXXXXXXXXXACMSYDDVMADGALDEPAXXXXXXXXXXXXXXXXXGASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQ----EGGASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARV 1257
            E L V W       +D  EG   ++S+   +WLR+H  S    D       P D    R  + VLWG D+     +               M+YD +M DG  D                          + L++  G+ LV+  P     TEA A ++G  +  T+YG  MW T  +    E  + D+A +N  L  HTDC YL  PPG+Q+FNCV ++      GG+S YVDGF VAE LRA  P+A++FF  T + + C D+        P+ +L   G +   R ND DR+ L +LS ED   FY++H  L   I +  +V +  L  G+ +I+DNQR LHGR +F G R ++GCY+G  E  S  RV
Sbjct:   87 EALNVEW-------KDVVEGSTCTSSSFTSEWLRKHVYSTPKNDY------PVDYKQDRLEKKVLWGKDLMEKMPT---------------MTYDAMMHDGFRDG-------------------------MKLLQQHGLLLVKNTPDTMDATEAFARKIG-FVLETIYGK-MWTTRPQTE--EMSYNDTASTNLALPGHTDCTYLYTPPGLQIFNCVQQSHAGDPNGGSSRYVDGFHVAEWLRAKAPDAYDFFCRTKLPFYCIDDDTLLATMEPIIKLDYRGNIESFRLNDGDRSVLTHLSFEDTFAFYKHHKVLWQAINELEIVHK--LHEGDMMIVDNQRVLHGRHAFIGERALIGCYIGKTEYDSRLRV 399          
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Match: Trimethyllysine (dioxygenase n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YYC2_9STRA)

HSP 1 Score: 187 bits (475), Expect = 1.460e-51
Identity = 129/371 (34.77%), Postives = 173/371 (46.63%), Query Frame = 1
Query:  157 EVLRVSWGDSPAGPQDPGEGPNTSTSTIPIDWLRRHCTSATARDLRRRHGGPADGPCIR-PRPVLWGADVFSSNASDTPQXXXXXXXXXACMSYDDVMADGALDEPAXXXXXXXXXXXXXXXXXGASARLVDLIRSRGVALVRGVPTDEKGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALHTDCGYLADPPGIQVFNCVVRAQEG---GASIYVDGFAVAERLRATNPEAFEFFSTTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNEDIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGRRRMVGCYLGMDELHSSARV 1257
            + L++ W       QDP  G     S     WLR H  S+           PA+    R    VLWG D+     S T               YD +M DG  D                          + L++  G+ LV+  P     TEA A R+G  +  T+YG  MW T  + +  E  + D+A +N  L  HTDC YL  PPG+Q+FNCV +A  G   GAS YVDGF VAERLR  +P  FEFFST  + + C D+         V  L   G V   R ND DRA L +LS E++  FY +H SL   I +  +V +  L+ G+ +++DN R +HGR +F G R ++GCY+G  E  S  RV
Sbjct:   81 DALQIQW-------QDPIAGSACKQSAFTSSWLRDHVYSSPKTTY------PANYRQDRLENKVLWGKDLADKMPSAT---------------YDAMMGDGFRDG-------------------------MRLLQQHGLLLVKNTPDSMDATEAFARRIG-FVLETVYGT-MWTTRPKTA--EMSYNDTASTNLELPAHTDCTYLYTPPGLQIFNCVQQAAGGPADGASRYVDGFHVAERLRQNDPATFEFFSTIKLPFYCLDDDTSLATMETVIDLDYRGNVQGFRLNDGDRAALTHLSFEEVGAFYAHHKSLWAAIDELEVVHK--LDEGDMMVVDNSRVMHGRHAFLGERALIGCYIGKTEYDSRLRV 392          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7385.15563.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
TauD7.090e-23584.00domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
TauD4.530e-17689.61domain-containing protein n=1 Tax=Ectocarpus silic... [more]
TauD7.500e-8657.20domain-containing protein n=1 Tax=Tribonema minus ... [more]
Uncharacterized1.220e-5943.97protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Trimethyllysine8.800e-5943.97dioxygenase n=1 Tax=Globisporangium ultimum (strai... [more]
Trimethyllysine2.220e-5845.31dioxygenase n=1 Tax=Pythium brassicum TaxID=148501... [more]
Trimethyllysine8.180e-5843.97dioxygenase n=2 Tax=Pythium insidiosum TaxID=11474... [more]
Uncharacterized1.800e-5243.10protein n=3 Tax=Phytophthora kernoviae TaxID=32545... [more]
Trimethyllysine1.160e-5133.87dioxygenase n=1 Tax=Thraustotheca clavata TaxID=74... [more]
Trimethyllysine1.460e-5134.77dioxygenase n=1 Tax=Achlya hypogyna TaxID=1202772 ... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7385contigE_fasciculatus_S2_contig7385:2786..6501 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start0
Seed ortholog score501.1
Seed ortholog evalue5e-139
Seed eggNOG ortholog2880.D7FLG7
Model size1269
KEGG rclassRC00773
KEGG koko:K00474
KEGG ReactionR03451
KEGG Pathwayko00310,map00310
Hectar predicted targeting categoryother localisation
Exons5
EggNOG free text desc.trimethyllysine dioxygenase activity
EggNOG OGsCOG2175@1,KOG3889@2759
Ec32 ortholog descriptionTaurine catabolism dioxygenase TauD/TfdA
Ec32 orthologEc-17_001250.1
EC1.14.11.8
Cds size1269
COG Functional cat.Q
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842401.5113726-CDS-E_fasciculatus_S2_contig7385:2785..28601696842401.5113726-CDS-E_fasciculatus_S2_contig7385:2785..2860Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7385 2786..2860 -
1696842401.5262692-CDS-E_fasciculatus_S2_contig7385:3924..40181696842401.5262692-CDS-E_fasciculatus_S2_contig7385:3924..4018Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7385 3925..4018 -
1696842401.5374067-CDS-E_fasciculatus_S2_contig7385:4639..47401696842401.5374067-CDS-E_fasciculatus_S2_contig7385:4639..4740Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7385 4640..4740 -
1696842401.548252-CDS-E_fasciculatus_S2_contig7385:5175..53851696842401.548252-CDS-E_fasciculatus_S2_contig7385:5175..5385Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7385 5176..5385 -
1696842401.558739-CDS-E_fasciculatus_S2_contig7385:5712..65011696842401.558739-CDS-E_fasciculatus_S2_contig7385:5712..6501Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7385 5713..6501 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7385.15563.1prot_E_fasciculatus_S2_contig7385.15563.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7385 2786..6501 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7385.15563.1

>prot_E_fasciculatus_S2_contig7385.15563.1 ID=prot_E_fasciculatus_S2_contig7385.15563.1|Name=mRNA_E_fasciculatus_S2_contig7385.15563.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=423bp
QVDTFQVPNNLQVRNTSVVATATPRPPSSSSPADAEGGGDSSSIATTTDR
QAEVLRVSWGDSPAGPQDPGEGPNTSTSTIPIDWLRRHCTSATARDLRRR
HGGPADGPCIRPRPVLWGADVFSSNASDTPQQQQQQQQPPACMSYDDVMA
DGALDEPAPAPAPADAAGSPPPPAPGASARLVDLIRSRGVALVRGVPTDE
KGTEALALRVGGHLRSTLYGPGMWATSAEASAGEEGFRDSAYSNDGLALH
TDCGYLADPPGIQVFNCVVRAQEGGASIYVDGFAVAERLRATNPEAFEFF
STTSISYQCFDEGCHYMAEGPVFRLGPHGEVVQVRYNDYDRAPLDYLSNE
DIDRFYEYHASLSDIIRDPSLVARIVLEPGECVILDNQRALHGRESFKGR
RRMVGCYLGMDELHSSARVQRT*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7385:2786..6501-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7385.15563.1 ID=mRNA_E_fasciculatus_S2_contig7385.15563.1|Name=mRNA_E_fasciculatus_S2_contig7385.15563.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3716bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7385:2786..6501- (Ectocarpus fasciculatus EfasUO2)
CAGGTGGACACGTTCCAGGTGCCGAACAATCTCCAAGTACGGAACACGTC GGTAGTAGCAACAGCAACACCACGCCCGCCCAGCTCTTCTTCCCCTGCCG ACGCTGAAGGAGGAGGCGACAGCAGCAGCATCGCCACAACCACCGACCGA CAAGCTGAAGTCCTCCGAGTATCCTGGGGCGACAGTCCGGCCGGACCCCA AGATCCCGGCGAGGGGCCGAACACCAGCACAAGCACCATCCCCATCGACT GGCTGCGGCGGCACTGCACCTCGGCGACGGCGCGAGACCTGCGGCGGCGC CACGGGGGCCCCGCAGATGGCCCTTGTATCCGCCCCCGCCCGGTCCTGTG GGGCGCGGACGTCTTCTCCTCCAACGCCTCAGACACGCCGCAACAACAAC AACAACAGCAACAACCTCCCGCATGCATGAGCTATGACGATGTCATGGCG GACGGAGCCCTCGACGAACCGGCGCCGGCGCCGGCGCCGGCGGATGCGGC GGGCTCGCCCCCGCCACCCGCTCCTGGAGCAAGCGCTCGCCTGGTCGACC TCATCCGGTCGCGCGGCGTAGCCCTCGTCCGCGGCGTTCCCACCGACGAG AAGGGCACCGAGGCCCTGGCGCTCAGGGTCGGGGGCCACCTGCGCAGCAC GCTGTACGGCCCCGGCATGTGGGCCACGTCTGCGGAGGCCTCCGCCGGGG AGGAAGGGTTTCGGGACAGCGCTTACTCCAACGACGGGCTGGCGCTGCAC ACGGACTGCGGGTACCTCGCGGACCCGCCGGGAATCCAGGTACAGTACAG CAGCAGTGGGGTTCCCTGAATGAGGCGGTTGCCCCTATATAAGGCGGCTG GGATAGACGGAATAATCAAGTCGTTCTTTCTAGGCATATTGAGGAAGGTG GCTGCCCCATATATGAGGCGCTCAATATCAGCTGCCCGACCATCGCCTTG TTCGGGGAGCCCTACTGTACGTTGAGTGCGTGTGTACTGGTCTAACGACT ATGGCATGCACGACAAGGAGCACACCCGCCCTCCCCCTCAGTGATCCATG GTCTAGACGGCCAAGGCATGCCAAACATGAGTAACGCCCCCCCCCCCCCC CCCCACTCCCGGACAGGTGTTCAACTGCGTAGTTCGAGCGCAAGAGGGCG GCGCGAGCATCTACGTTGACGGTTTCGCGGTTGCCGAACGCCTTCGCGCC ACAAACCCGGAGGCCTTCGAGTTCTTCTCGACGACCTCCATCTCCTACCA GTGCTTCGACGAGGGGTGCCACTACATGGCAGAAGGTCCCGTGTTCCGGC TGGGGCCTCACGGCGAGGTTGTCCAGGTGCGAGAAAACATCGAGGGTTGC ACTTTGCGGCTTCTCACTGCATTGCACCCCCTTCCGTCTCTGGTGAGATG CCTGGTCAATGTGGTAGGGACTGCGAGGTACGCAACGACTGACACTCACA CTCCCTCCCCCCCCGCGGCATTCTCAGTGAGTGGGACCCCGTTGTATGAT GATTACGCGGTGGGCACCCCTCCCCTTCCGAGTGGTCCATGGTCTAGCAA CTGAGGCACGCAATAACATTAGTACGCCCCCTCCCCCCCCGAATAACCTG CCGTCTCGGTCTCTTCGATGGGTAACCCTTCCCCTTCCGAGTGGTCCATG GTCCAACAACTAAAGCACGCAAGAACATGAGCACGCCCCCCCGCCGAATA CCCCACCGTCTCTGTCTCTCTCTGCTCCTGTCTTATCCTTGGCCCTGTCC TGCGTGCGAAGGTGAGGTACAACGACTACGATCGAGCACCGCTAGACTAC CTGTCGAACGAAGACATCGACCGCTTCTACGAGTACCACGCGTCCTTGTC CGACATCATACGGTGAGGGGGGGTGTAGCTTTTTCCCCACTGAGACGAAA AGCACCATGGAAAACGGCTGCTGCTGCTGGTGCTGCTGCCGCCGTGCGAC ATACCTGTGGTCGCTGGAAAGGACTCTTTCCAAGCAAGGTCTACATCCGT ATCGGTTTATCTATGACGGTTATTGCTGCCAGGTTCTGCCGCTGCTTTTG CCTTCGCATTGAGCAACTGTCGGTGCTGCTGCTGCTGCTGCTGTTTTCAC ATAAGAGGCACAGGGTTAGCCGCTTACCTGGCCCCCACCCAAACTACGGC CTGCGTCTACCGTCGTCGTCGTCGTCGTCGTCGTCGTCGTTCTCTTGTTT GCTCCACCAACGTCCGTCCAATATTATTCCGCCCAATGTTGTTCCGCCTA ATGCTGTTCCGCCCATTGTTGTTACTGTACGTCCAACTCCAACAACCCCG ACCCCATTTGAAATTGGGGGTTCTGACCCGACTAAAATATCAATACTGTA AATGCGTTTGTGACAGAAGAATGCAGTTATAACAACACTATCACCATTTT ATTGTAACAGAAGTTTTGGCAGAGAAACCTTGTGACAACAAAGTGATATT TTTTTTTGTTGTTCCGTCCCTCCCCCCCCCCAGGGACCCGTCCTTGGTGG CACGCATTGTTCTCGAGCCCGGAGAGTGCGTCATTCTGGACAACCAACGA GCGTTGCACGGCCGGGAGTCTTTCAAGGTTAGGTTCGGCTTTCTATGAAT CCGGTCAACAAGAAAGTGACATGTTTCCAAACTCTCGGCGCATGACTATC ATGATGACCAGCATGGGTTTCCTGGTGTCTTACTGCTTGACGAGTGGGAT GGGGAAATTAAATTCATTGTTTACGAGTGATGGCTCCCTTCGGAGTGGGC TCACGAGAGCACGGCAATGTCATCAAGGTCAAGGGGTCATGCAAGATGGA AATAATAATAATAACGGTCTGCAGGACCAATCCACGGCTGACTGACTGCC AGCTGTCGTGTGACGTGTCCCAAGCTCAACGGCTCACACAGCTGACTAAC GTGTTTTTTGACTCGAACAGCCCAGCGAACCGCAACGAACGAAAAATTAA AGTAATAAAAATGTCTACAGCAGTTTACAGTGGTTTTCCTCTTCACGTTT TGGAGCGTTTTGGAGCGGAAACTACTTTGTCAGAAGATAACTTTTCCGTC CATTTGTCTTGAGTGACGGAGGGCATCGACGTACTGTATCGTTTCTCATC TCGCAGAGTAACGACAACCGGTTTAGGTGGTAGTGGCTATACAACGGGCG TGCATCTGTCTCCCAATGGGCCACCTATTATTGTTTCGTAGACACCTTGT TGTACCGAGCTTCTCGATTAGCGTGTTCTTGATCGTGCGGGGACAGCTTC CATCTCCCTGTCCATTTCTCCAATTGTTTCCACCTGGCTAATGGCGAAGT TCTGTACCCCCCCCCGCCGTAGGGGGAGGGGGGGGGGGGGCGACGTAGTA TCACAAGAGCCCCTCTGTTGTCTCGAATTCGTTCCTCTCTGAAAGGTGCA TGCATGTGACGAGAAATCACCGTGCCCTTGTTTCCCTCTCACCACCACCC AATAGATGAGACGAGACGAACACCCGAACAAATCAAATGTGTGGTTATTT CAACCAACCGCACTGCTCAAAGATTAACGTCCTTTCATCGGTCAGCCGGT TAGCCGGTTAGCGCGGTCGATGCTATGCACATTAGAAAAAAACACGCCAC CATCGCTTGCCCGCGCTATCAATGCGAAAACATCCTTCCAGGGACGAAGA CGCATGGTGGGGTGCTACCTGGGCATGGATGAGTTGCACTCGTCAGCCCG CGTCCAAAGGACGTAA
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7385:2786..6501-

>mRNA_E_fasciculatus_S2_contig7385.15563.1 ID=mRNA_E_fasciculatus_S2_contig7385.15563.1|Name=mRNA_E_fasciculatus_S2_contig7385.15563.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1269bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7385:2786..6501- (Ectocarpus fasciculatus EfasUO2)
CAGGTGGACACGTTCCAGGTGCCGAACAATCTCCAAGTACGGAACACGTC
GGTAGTAGCAACAGCAACACCACGCCCGCCCAGCTCTTCTTCCCCTGCCG
ACGCTGAAGGAGGAGGCGACAGCAGCAGCATCGCCACAACCACCGACCGA
CAAGCTGAAGTCCTCCGAGTATCCTGGGGCGACAGTCCGGCCGGACCCCA
AGATCCCGGCGAGGGGCCGAACACCAGCACAAGCACCATCCCCATCGACT
GGCTGCGGCGGCACTGCACCTCGGCGACGGCGCGAGACCTGCGGCGGCGC
CACGGGGGCCCCGCAGATGGCCCTTGTATCCGCCCCCGCCCGGTCCTGTG
GGGCGCGGACGTCTTCTCCTCCAACGCCTCAGACACGCCGCAACAACAAC
AACAACAGCAACAACCTCCCGCATGCATGAGCTATGACGATGTCATGGCG
GACGGAGCCCTCGACGAACCGGCGCCGGCGCCGGCGCCGGCGGATGCGGC
GGGCTCGCCCCCGCCACCCGCTCCTGGAGCAAGCGCTCGCCTGGTCGACC
TCATCCGGTCGCGCGGCGTAGCCCTCGTCCGCGGCGTTCCCACCGACGAG
AAGGGCACCGAGGCCCTGGCGCTCAGGGTCGGGGGCCACCTGCGCAGCAC
GCTGTACGGCCCCGGCATGTGGGCCACGTCTGCGGAGGCCTCCGCCGGGG
AGGAAGGGTTTCGGGACAGCGCTTACTCCAACGACGGGCTGGCGCTGCAC
ACGGACTGCGGGTACCTCGCGGACCCGCCGGGAATCCAGGTGTTCAACTG
CGTAGTTCGAGCGCAAGAGGGCGGCGCGAGCATCTACGTTGACGGTTTCG
CGGTTGCCGAACGCCTTCGCGCCACAAACCCGGAGGCCTTCGAGTTCTTC
TCGACGACCTCCATCTCCTACCAGTGCTTCGACGAGGGGTGCCACTACAT
GGCAGAAGGTCCCGTGTTCCGGCTGGGGCCTCACGGCGAGGTTGTCCAGG
TGAGGTACAACGACTACGATCGAGCACCGCTAGACTACCTGTCGAACGAA
GACATCGACCGCTTCTACGAGTACCACGCGTCCTTGTCCGACATCATACG
GGACCCGTCCTTGGTGGCACGCATTGTTCTCGAGCCCGGAGAGTGCGTCA
TTCTGGACAACCAACGAGCGTTGCACGGCCGGGAGTCTTTCAAGGGACGA
AGACGCATGGTGGGGTGCTACCTGGGCATGGATGAGTTGCACTCGTCAGC
CCGCGTCCAAAGGACGTAA
back to top