prot_E_fasciculatus_S2_contig7374.15560.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7374.15560.1
Unique Nameprot_E_fasciculatus_S2_contig7374.15560.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length327
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: D7G2W7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G2W7_ECTSI)

HSP 1 Score: 483 bits (1242), Expect = 7.140e-166
Identity = 273/328 (83.23%), Postives = 287/328 (87.50%), Query Frame = 0
Query:    1 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWRIRLTHVGFALVRRCSSRTRLSSPRGSNRGDDASTTV-KDPMHDRHDRHSGWKLRRRNQHTAPSXXXXXXXXXXXXX--PVAPPPGITGSTSRGGPSVSAPEKRKVSSKNRGGGGTRKKRGGLTRGQRLAMSHRHYDLRAAVEVLRRSPLPETAVWRKMRQIVGARLGWVSEGAGNRGEPLQPGAAWGGSK 325
            MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWT SFVTMTRIALGEFDNIYPLMV+IDGAAAFMIIV+YQTLQ ILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWRIRLTHVGFALV RC S TR SSPRGS+ GDDA TTV K+PMHDRH    G KLR+R+QHTAP+               PVAPP GITGS+SRG P + + +KRKVSSKNRGGG T  KRGGLTRGQRLAMSHRHYDLR AVEVLRRSPLPE AVWRKMRQI+GARLGWVSEGAGN G+PLQPGAAWG S+
Sbjct:  242 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTKSFVTMTRIALGEFDNIYPLMVEIDGAAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWRIRLTHVGFALVGRCPSVTRRSSPRGSSVGDDAGTTVVKNPMHDRH---GGRKLRQRHQHTAPTAGGTSAAAVAAAAGVPVAPP-GITGSSSRGVPLLPSSDKRKVSSKNRGGGAT--KRGGLTRGQRLAMSHRHYDLRTAVEVLRRSPLPEAAVWRKMRQIIGARLGWVSEGAGNTGKPLQPGAAWGRSQ 563          
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: A0A6H5KPV8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPV8_9PHAE)

HSP 1 Score: 273 bits (697), Expect = 6.740e-88
Identity = 183/260 (70.38%), Postives = 196/260 (75.38%), Query Frame = 0
Query:   76 MVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWRIRLTHVGFA--------------------------------LVRRCSSRTRLSSPRGSNRGDDASTTV-KDPMHDRHDRHSGWKLRRRNQHTAPSXXXXXXXXXXXXX--PVAPPPGITGSTSRGGPSVSAPEKRKVSSKNRGGGGTRKKRGGLTRGQRLAMSHRHYDLRAAVEVLRRSPLPETAVWRKMRQIVGAR 300
            MVDIDG AAFMIIV+YQTLQ ILLLNIVISILLDAFQMVQ R+SVVAADTLWQTVMTTLGRWRIRLTH+GFA                                LV RCSS TR    R S+RGDDA TTV ++PMHDRH    GWKLRRR+Q TAP+XXXXXXXXXXX    PVAPP GITGS+SRG PS+   +KRKVSSKNRGGG TR  RGGLT GQRLAMSHRHY+L AAVEVLRRSPLPE AVWRKMRQI+GAR
Sbjct:    1 MVDIDGGAAFMIIVTYQTLQCILLLNIVISILLDAFQMVQTRDSVVAADTLWQTVMTTLGRWRIRLTHMGFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALVHRCSSGTR----RSSDRGDDAGTTVVRNPMHDRH---GGWKLRRRHQRTAPTXXXXXXXXXXXVTGVPVAPP-GITGSSSRGAPSLPTSDKRKVSSKNRGGGATR--RGGLTGGQRLAMSHRHYELHAAVEVLRRSPLPEAAVWRKMRQIIGAR 250          
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: D7FTQ7_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ7_ECTSI)

HSP 1 Score: 91.7 bits (226), Expect = 5.240e-19
Identity = 52/135 (38.52%), Postives = 89/135 (65.93%), Query Frame = 0
Query:    1 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLG 135
            ML FH R+S+VTD L+ ++ HL HF  +FF+V+  ++ L W++ G S+  F+T   ++ ++TRI+LGE +N YP ++D       + +V YQ L V+LLLN+VI+I L+A++ V   + +   DT++Q+ +  +G
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLVEAWGSVTRISLGESENFYPQILDAQPTVGPVAVVLYQVLGVVLLLNVVIAIFLEAYRGVV--SGMRGEDTIFQSFIAFVG 133          
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: D7FTQ6_ECTSI (Transient Receptor Potential Channel n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTQ6_ECTSI)

HSP 1 Score: 90.9 bits (224), Expect = 1.660e-18
Identity = 48/111 (43.24%), Postives = 77/111 (69.37%), Query Frame = 0
Query:    1 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAF 111
            ML FH R+S+VTD L+ ++ HL HF  +FF+V+  ++ L W++ G S+  F+T   ++ ++TRI+LGE +N YP ++D       +++V YQ L V+LLLN+VI+ILL+ F
Sbjct:   32 MLTFHKRMSIVTDTLSRASTHLDHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWQSVTRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLETF 142          
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: A0A6H5L574_9PHAE (PKD_channel domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L574_9PHAE)

HSP 1 Score: 92.4 bits (228), Expect = 7.330e-18
Identity = 52/135 (38.52%), Postives = 90/135 (66.67%), Query Frame = 0
Query:    1 MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLG 135
            ML FH R+S+VTD L+ ++ HL HF  +FF+V+  ++ L W++ G S+  F+T   ++ ++ RI+LGE +N YP ++D       +++V YQ L V+LLLN+VI+ILL+A++ V   + +   DT++Q+ +  +G
Sbjct:    1 MLTFHKRMSIVTDTLSRASTHLNHFLFVFFLVILAFAALTWLLVGSSTKEFSTLEDAWRSVIRISLGESENFYPQILDAQPTVGPVVVVLYQVLGVVLLLNVVIAILLEAYRGVA--SGMHGEDTIFQSFIAFVG 133          
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: A0A1Q9DKM7_SYMMI (Polycystin-2 n=4 Tax=Symbiodinium TaxID=2949 RepID=A0A1Q9DKM7_SYMMI)

HSP 1 Score: 58.5 bits (140), Expect = 9.770e-6
Identity = 51/160 (31.87%), Postives = 86/160 (53.75%), Query Frame = 0
Query:    4 FH--PRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWR-------IRLTHVGFALVRRCSS 154
            FH  PRL++VT  +  ++  L+HFFI+   V    +   +++FG     F+TW    +T  R  LGE+D  +  M  +    A + +  +  L V+LLLN+V++IL+DA+Q+V+ + SV+   T+ Q +   L R R       +RL  + FA + +  S
Sbjct:  503 FHAQPRLAIVTKTIITASQDLLHFFIVLLSVYTCMAVFGYLLFGQDVENFSTWDRVCITCFRALLGEWD--WEEMETVGRVLAAIWLWCFVVLVVLLLLNMVLAILMDAYQVVKSKASVMV--TVPQQISEMLRRRRLNREKKTVRLVEIWFAYLEQFQS 658          
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: A0A812IFP8_9DINO (Rsph3a protein n=1 Tax=Symbiodinium sp. CCMP2592 TaxID=631055 RepID=A0A812IFP8_9DINO)

HSP 1 Score: 58.2 bits (139), Expect = 1.170e-5
Identity = 51/160 (31.87%), Postives = 86/160 (53.75%), Query Frame = 0
Query:    4 FH--PRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWR-------IRLTHVGFALVRRCSS 154
            FH  PRL++VT  +  ++  L+HFFI+   V    +   +++FG     F+TW    +T  R  LGE+D  +  M  +    A + +  +  L V+LLLN+V++IL+DA+Q+V+ + SV+   T+ Q +   L R R       +RL  + FA + +  S
Sbjct:   11 FHAQPRLAIVTKTIITASQDLLHFFIVLLSVYTCMAVFGYLLFGQDVEDFSTWDRVCITCFRALLGEWD--WEEMETVGRVLAAIWLWCFVVLVVLLLLNMVLAILMDAYQVVKSKASVMV--TVPQQISEMLRRRRLNREKKTVRLVEIWFAYLEQFQS 166          
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Match: A0A812ISQ8_SYMPI (PKD2 protein n=1 Tax=Symbiodinium pilosum TaxID=2952 RepID=A0A812ISQ8_SYMPI)

HSP 1 Score: 58.2 bits (139), Expect = 1.170e-5
Identity = 50/160 (31.25%), Postives = 88/160 (55.00%), Query Frame = 0
Query:    4 FH--PRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLLFATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLLNIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWR-------IRLTHVGFALVRRCSS 154
            FH  PRL+LVT  +  ++  L+HFFI+ F V    +   +++FG     F+TW  + +T  R  LGE+D  +  +  +    A + +  +  L V+LL+N+V++IL+DA+ +V+ + SV+   T+ Q +   L R R       +RL+ + FA + +  S
Sbjct:  506 FHAQPRLALVTKTIITASQDLLHFFIVLFSVYSCMAIFGYLLFGQDVQDFSTWDRACITCFRALLGEWD--WEELQSVGRVLAAIWLWCFVVLIVLLLVNMVLAILMDAYGVVKSQASVMM--TVPQQISEMLRRRRLNRDKKTVRLSEIWFAYLEQFQS 661          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7374.15560.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 8
Match NameE-valueIdentityDescription
D7G2W7_ECTSI7.140e-16683.23Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5KPV8_9PHAE6.740e-8870.38Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7FTQ7_ECTSI5.240e-1938.52Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
D7FTQ6_ECTSI1.660e-1843.24Transient Receptor Potential Channel n=1 Tax=Ectoc... [more]
A0A6H5L574_9PHAE7.330e-1838.52PKD_channel domain-containing protein n=1 Tax=Ecto... [more]
A0A1Q9DKM7_SYMMI9.770e-631.88Polycystin-2 n=4 Tax=Symbiodinium TaxID=2949 RepID... [more]
A0A812IFP8_9DINO1.170e-531.88Rsph3a protein n=1 Tax=Symbiodinium sp. CCMP2592 T... [more]
A0A812ISQ8_SYMPI1.170e-531.25PKD2 protein n=1 Tax=Symbiodinium pilosum TaxID=29... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013122Polycystin cation channel, PKD1/PKD2PFAMPF08016PKD_channelcoord: 2..113
e-value: 1.0E-8
score: 34.3
NoneNo IPR availablePANTHERPTHR10877:SF181coord: 1..132
NoneNo IPR availablePANTHERPTHR10877POLYCYSTIN-RELATEDcoord: 1..132
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 62..81
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 34..38
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..33
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 109..326
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 82..108
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..61
NoneNo IPR availableTMHMMTMhelixcoord: 49..66
NoneNo IPR availableTMHMMTMhelixcoord: 86..108
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7374contigE_fasciculatus_S2_contig7374:372..5481 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7374.15560.1mRNA_E_fasciculatus_S2_contig7374.15560.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7374 359..6091 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7374.15560.1 ID=prot_E_fasciculatus_S2_contig7374.15560.1|Name=mRNA_E_fasciculatus_S2_contig7374.15560.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=327bp
MLRFHPRLSLVTDVLTASAVHLVHFFIMFFMVVGVYSNLVWVIFGPSSLL
FATWTTSFVTMTRIALGEFDNIYPLMVDIDGAAAFMIIVSYQTLQVILLL
NIVISILLDAFQMVQKRNSVVAADTLWQTVMTTLGRWRIRLTHVGFALVR
RCSSRTRLSSPRGSNRGDDASTTVKDPMHDRHDRHSGWKLRRRNQHTAPS
SATAAAAAAVAGVPVAPPPGITGSTSRGGPSVSAPEKRKVSSKNRGGGGT
RKKRGGLTRGQRLAMSHRHYDLRAAVEVLRRSPLPETAVWRKMRQIVGAR
LGWVSEGAGNRGEPLQPGAAWGGSKP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013122PKD1_2_channel