mRNA_E_fasciculatus_S2_contig7370.15557.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7370.15557.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCF7_ECTSI) HSP 1 Score: 1073 bits (2776), Expect = 0.000e+0 Identity = 744/964 (77.18%), Postives = 757/964 (78.53%), Query Frame = 1
Query: 1 VPKFLPIAPALVRALRAADAATQTQGLCDALYCTQAIAGVPGGMDRLLRAGAAPAVVSRLSAASGERAARANEEKAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSXXXXXXXXXXXXXXXXXXX--PKADRNGGPADGDTXXXXXXXXERSEALALAFVGRALEASGGGCLGSRELTAVAEAFRDDPTPAKFGFLDLLLRWASLREEGEEAAPFP-GGEGGVGAWTRDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQEWAVEEDGEEAXXXXXXXXXXXXXXXXXXXXXXXXKGK-----AKRKRGTFVAFAVRCAAGEVRILLDEALSLFVPAEARGGARASNGDEEAXXXXXXXXXXXXXXXXXXXS---------------------------------------------------------------------------------------KNRWEELPIDTLQDLQKTLVGLFGCVLDFLSEIRRWVLVVPPSTSSDADTRSASAGPSIVDLWALHRLGLECSRVLGVWVAEDPESLPQRFLEALPVLLALNAGEEAPDSDDXXXXXXXXX--ASATVTPTLAAFPGAARYLAGGGAPAGLAASVSSATRPDEALHNILRAMLALSYEPTPLAAIVEEGVTARLANLAAAGPPAIAALLMLGRTSSSSSADYGRASGGGELPTSPPEQVSEAVRSPLVSACGLLTNILTSAGHLAWPEERAAXXXXXXXXXXXARGRGAGSDQPWTRGAPSHPVLGHPGMGQCLASLAEVAGAAGAARRAGGGTRWRLLAAHATLVVMTVARAATPGNGLAPAAGLAGRRPRRWSGEEEDDVRSDGGRGSSPSVWEGMGRAVDEALGSLSATPGRGLIGXXXXXXXXXXXXASYEEGAIWQWCLECAREMEAAPGGAAGNAYVSCGVVPRRVLRSLKEASADGRI 2601
VPKF+PIAPALVRALRAADAATQTQGLCDALYCTQAIAGVP GM+RLLRAGAAPAV SRLS ASGERAAR NEEK P XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXX PK D GGPADGDT ERSE LALAFVGRALEASGGGCLGSRELTAVAEAFRDDPTPAKFGFLDLLLRWASLRE+ EE+APFP GG+GGVGAWTRDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQEWAVEED EEA XXXXXXXXXXXXXXXXXXXXXXX AKRKRGTFVAFAVRCAAGEVRILLDEALSLFVPA ARGGARAS+GDEEA S KNRWEELPIDTLQDLQKTLVGLFGCVLDFLSEIRRWVL V ST DAD SASAGPSIVDLWALHRLGLECSRVLGVWVAEDPESLPQRFLEALPVLLAL AGEEAPDSD XXXXXXXXX ASATVTPTLAAFPGAARYLAGG A AG AAS SSATRPDEALHNILRAMLALSYEPTPLAA+VEEGV ARLA LAA+GPPAIAAL LGRTS G G LPTSPPEQVSEAVRSPLVSACGLLTNILTSAGHLAWPE+R A XXXXXXXXX R RGAGS QP RGAPSH VLGHPGMGQCLASLAEVAGAAGAARRAGGG RWRLLAAHATLVVMTVARAATPGNGLAPAAGLAGRRP+RWSGEE D R G RGSSPSVWEGM RAVDEALGSLSATPGRGLIG ASYEEG+IWQWCLECARE+EAAPGGAAGNAYVSCGVVPRRV+RSLKEASADGRI
Sbjct: 164 VPKFVPIAPALVRALRAADAATQTQGLCDALYCTQAIAGVPVGMERLLRAGAAPAVASRLSVASGERAARPNEEKDPGGDQSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPKDDGRGGPADGDTPAAAA---ERSEGLALAFVGRALEASGGGCLGSRELTAVAEAFRDDPTPAKFGFLDLLLRWASLRED-EESAPFPAGGDGGVGAWTRDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQEWAVEEDVEEADXXXXXXXXXXXXXXXXXXXXXXXXXXKKNRVAKRKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGARASDGDEEAGPGTGQKARGAMGPAGADPSIGIAAEITAAKAAAAGAGGKQGEGQRLSPAPRSPLPASQLKAIKEQRAARLLRMVPVGLGVAESTIAFLCGXXXXXXXXXXXXXKSSKNRWEELPIDTLQDLQKTLVGLFGCVLDFLSEIRRWVLAVSHSTGGDADGGSASAGPSIVDLWALHRLGLECSRVLGVWVAEDPESLPQRFLEALPVLLALKAGEEAPDSDXXXXXXXXXXXXASATVTPTLAAFPGAARYLAGG-ARAGHAASASSATRPDEALHNILRAMLALSYEPTPLAAMVEEGVAARLARLAASGPPAIAALXXLGRTS-------GXXXXG--LPTSPPEQVSEAVRSPLVSACGLLTNILTSAGHLAWPEDRPAAXXXXXXXXX--RRRGAGSHQP--RGAPSHAVLGHPGMGQCLASLAEVAGAAGAARRAGGGARWRLLAAHATLVVMTVARAATPGNGLAPAAGLAGRRPQRWSGEE-GDARGIGARGSSPSVWEGMARAVDEALGSLSATPGRGLIGGGRGGEEEEE--ASYEEGSIWQWCLECAREIEAAPGGAAGNAYVSCGVVPRRVIRSLKEASADGRI 1106
BLAST of mRNA_E_fasciculatus_S2_contig7370.15557.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KXD7_9PHAE) HSP 1 Score: 568 bits (1464), Expect = 1.470e-188 Identity = 421/585 (71.97%), Postives = 429/585 (73.33%), Query Frame = 1
Query: 1 VPKFLPIAPALVRALRAADAATQTQGLCDALYCTQAIAGVPGGMDRLLRAGAAPAVVSRLSAASGERAARANEEK------APXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTPSXXXXXXXXXXXXXXXXXXXPKADRNGGPADGDTXXXXXXXXERSEALALAFVGRALEASGGGCLGSRELTAVAEAFRDDPTPAKFGFLDLLLRWASLREEGEEAAPFP-GGEGGVGAWTRDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQEWAVEEDGEEAXXXXXXXXXXXXXXXXXXXXXXXXKGKAKRKRGTFVAFAVRCAAGEVRILLDEALSLFVPAEARGGARASNGDEEAXXXXXXXXXXXXXXXXXXXS---------------------------------------------------------------------------------------KNRWEELPIDTLQDLQKTLVGLFGCVLDFLSEIRRWVLVVPPSTSSDADTRSASAGPSIVDLWALHRLGLECSRVLGVWVAEDPESLPQRFLEALPVLLALNAGEEA 1473
VPKF+P APALVRALRAADAATQTQGLCDALYCTQAIAGVPGGM RLLRAGAAPAVVSRLSAASGERAARANEE+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXX PK D GGPA GDT ERSEALALAFVGRALEASGGGCLGSRELTA+AEAFRDDPTPAKFGFLDLLLRWASLREE E+APFP GG+GGVGAW RDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQ WAVEEDGEE XXXXXXXXXXXXXXXXX K AKRKRGTFVAFAVRCAAGEVRILLDEALSLFVPA ARGGARAS+GDE+A S NRW+ELPIDTLQDLQKTLVGLFGCVLDFLSEIRRWVL V ST DAD SASAGPSIVDLWALHRLGLECSRVLGVWVAEDPESLPQRFLEALPVLLALNAGEEA
Sbjct: 160 VPKFVPTAPALVRALRAADAATQTQGLCDALYCTQAIAGVPGGMARLLRAGAAPAVVSRLSAASGERAARANEERDFGGDQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDPKGDGRGGPAGGDTPAAEAAA-ERSEALALAFVGRALEASGGGCLGSRELTAIAEAFRDDPTPAKFGFLDLLLRWASLREE--ESAPFPAGGDGGVGAWARDGPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQGWAVEEDGEEPGNGEGXXXXXXXXXXXXXXXXXKKKRVAKRKRGTFVAFAVRCAAGEVRILLDEALSLFVPAAARGGARASDGDEDAGPGTGQKARGAMGPAGADPSIGIAAEIAAAKAAATGKGGEQGEGQRPSPAPRCPLPASQLKAIKEQRAARLLRMVPVGLGVAESTIAFLCGXXXXXXXXXXXXXXXXXNRWQELPIDTLQDLQKTLVGLFGCVLDFLSEIRRWVLAVSHSTGGDADIGSASAGPSIVDLWALHRLGLECSRVLGVWVAEDPESLPQRFLEALPVLLALNAGEEA 741
BLAST of mRNA_E_fasciculatus_S2_contig7370.15557.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY02_9PHAE) HSP 1 Score: 503 bits (1294), Expect = 1.000e-168 Identity = 294/362 (81.22%), Postives = 301/362 (83.15%), Query Frame = 1
Query: 1519 SATVTPTLAAFPGAARYLAGGGAPAGLAASVSSATRPDEALHNILRAMLALSYEPTPLAAIVEEGVTARLANLAAAGPPAIAALLMLGRTSSSSSADYGRASGGGELPTSPPEQVSEAVRSPLVSACGLLTNILTSAGHLAWPEERAAXXXXXXXXXXXARGRGAGSDQPWTRGAPSHPVLGHPGMGQCLASLAEVAGAAGAARRAGGGTRWRLLAAHATLVVMTVARAATPGNGLAPAAGLAGRRPRRWSGEEEDDVRSDGGRGSSPSVWEGMGRAVDEALGSLSATPGRGLIGXXXXXXXXXXXX-ASYEEGAIWQWCLECAREMEAAPGGAAGNAYVSCGVVPRRVLRSLKEASADGRI 2601
SATVTPTLAAFPGAARYLAGG A AG AAS SS TRPDEALHNILRAMLALSYEPTPLAA+VEEGV ARLA LAAAG PAIAALL+LGRTSSS+ D GGELPTSPPEQVSEAVRSPLVSACGLLTNILTSAGHLAWPE+R A AR RGAG QP RGAP HPVLGHPGMGQCLASLAEVAGA RRAGGG RWRLLAAHATLVVMTVARAATPGNGLAPAAGLAGRRPRRWSGEE D G G+SPSVWEGM RAVDEALGSLSATPGRGLIG XXXX ASYEEGAIWQWCLECARE+E APGG GNAYVSCGVVPRR+L SLKEASADGRI
Sbjct: 23 SATVTPTLAAFPGAARYLAGG-ARAGHAASASSVTRPDEALHNILRAMLALSYEPTPLAAMVEEGVAARLARLAAAGLPAIAALLLLGRTSSSADDD------GGELPTSPPEQVSEAVRSPLVSACGLLTNILTSAGHLAWPEDRPAAAGGSGA----ARRRGAGRQQP--RGAPRHPVLGHPGMGQCLASLAEVAGAXXXXRRAGGGARWRLLAAHATLVVMTVARAATPGNGLAPAAGLAGRRPRRWSGEEGDPP----GDGASPSVWEGMARAVDEALGSLSATPGRGLIGGGRGGTGEXXXXEASYEEGAIWQWCLECAREIEVAPGGVTGNAYVSCGVVPRRLLSSLKEASADGRI 367
BLAST of mRNA_E_fasciculatus_S2_contig7370.15557.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZIL7_9STRA) HSP 1 Score: 116 bits (291), Expect = 5.700e-23 Identity = 123/426 (28.87%), Postives = 160/426 (37.56%), Query Frame = 1
Query: 484 EALALAFVGRALEASGGGCLGSRELTAVAEAFRDDPTPAKF-GFLDLLLRWASLREEGEEAAPFPGGEGGVGAWTRD------GPFPAALREGLLQALHGAAEDDRRDSALALLASLLRAVGQEWAVEEDGEEAXXXXXXXXXXXXXXXXXXXXXXXXKGKAKRKRGTFVAFAVRCAAGEVRILLDEALSLF-------VPAEARGGARASNGDEEAXXXXXXXXXXXXXXXXXXX---------------------------------------------------------------------------------SKNRWEELPIDTLQDLQKTLVGLFGCVLDFLSEIRRWVLV----VPPSTSSDADTRSASAGPSIVDLWALHRLGLECSRVLGVWVAEDPESLPQRFLEALPVLLALNAG 1464
EA AL + ++A+GG CLG+ +L A+A F DP+ A+ LL WA+ AA G G G RD F +R GLL+ALHG+A + RD+AL LLA+LLRA+G+ WAVE +G A KRGTFV FA R A EVRILLDEAL + + +A+G R EEA X + W LP +TL D++ L F VL+F E+ +V + ++ DT A+ P L L R+G C+ LG WVAEDPE L F ALP +LAL G
Sbjct: 140 EAAALRCLECCVDATGGACLGAADLAALALVFARDPSGARSRDAARALLHWATAL-----AAARGGSSHGGGGAQRDHALEGGSEFAGLVRSGLLRALHGSAAEAARDAALTLLAALLRALGERWAVEGEG------------------------------AGVKRGTFVRFAARAAGNEVRILLDEALGVLLLPDTTPIEGKAQGPWRGVPQSEEALLDANTARPPDPLAAAAAXXXXXXXXTPAGPXXXXXXXXXXXXXXXXXEKRAARAERMLPVALGILESAVQFLCGDEGDGGRGXXXXXDAXXXXXXXXXDAAQLWRSLPGETLLDIKSALDEAFSVVLEFFRELAPYVGAKRARADAAAAAAXDTAPAAVLPPAA-LARLRRIGAACADALGAWVAEDPEGLRTEFNLALPTILALLDG 529 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7370.15557.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 4
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7370.15557.1 >prot_E_fasciculatus_S2_contig7370.15557.1 ID=prot_E_fasciculatus_S2_contig7370.15557.1|Name=mRNA_E_fasciculatus_S2_contig7370.15557.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=868bp VPKFLPIAPALVRALRAADAATQTQGLCDALYCTQAIAGVPGGMDRLLRAback to top mRNA from alignment at E_fasciculatus_S2_contig7370:3720..7308- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7370.15557.1 ID=mRNA_E_fasciculatus_S2_contig7370.15557.1|Name=mRNA_E_fasciculatus_S2_contig7370.15557.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=3589bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7370:3720..7308- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7370:3720..7308- >mRNA_E_fasciculatus_S2_contig7370.15557.1 ID=mRNA_E_fasciculatus_S2_contig7370.15557.1|Name=mRNA_E_fasciculatus_S2_contig7370.15557.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2604bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7370:3720..7308- (Ectocarpus fasciculatus EfasUO2)back to top |