mRNA_E_fasciculatus_S2_contig7365.15552.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KU26_9PHAE) HSP 1 Score: 715 bits (1845), Expect = 3.480e-255 Identity = 374/498 (75.10%), Postives = 403/498 (80.92%), Query Frame = 1
Query: 10 DTPGGSRESECGPPAATTTHDDTGFDGTGLHVWPGSRLLARFLADPSGARRLFPQLFANQPGCAPPLHSAGNNRDGQADDIHASSXXXXXXXXXXXNGKLAPSA---ADGGRESSTRPRHRTAPHQ---------RPAPTTVLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVYPGKPFSDAEAFFVMAAENLDPEVGVLLLTYTPRQPSTCTENMLRCAYRAGLRGTALLSEHGNRWRKGNDPRSLRATGGGGSHNNDPLTNPRHGTSAFKEVDFCRREQGISPSSTCTTKGRNTVLDPRHAVECPWELGSGKGNNPAHTTQSGSTIRPREDCSHPGTTPKKPTLRETPAVPDGCTPVLLAFELCPKPTDRDGSLANSPERTWLSEWKSIFPDLQKRLESGPAWRAPDARRSHDGTVAPLSNGGRCDDAS---DEVTADYLWGSPTT 1458
DTP GSRES G P+ATTTHDD+ FDGTGLHVWPGSRLLARFLA+PSGARRLFPQ QPGCAPPLH G++ DGQ D+ A+S N K+ PSA ADG RESS RPRHRTAPHQ AP TVLELGAGTGVCGM ASLSLGC VVLTDRR DIL+NLR+NI+LNGLA+RARVVRLEWGRKSRSCPAEIR+LSPFKVILASDTVYPGKPFSD EAFF MAAE LDPEVGVLLLTYTPRQPSTCTENMLRCAYRAGLRGTAL +EHG+RWR+GNDPRSL A G GSHN+ PLT+PRHG++A K VDFC REQG PSSTCTT G N VLDPRHAV+CP E+ +GKGNN AH TQSGS RP EDCSHPGTTP KP LR+T VPDGCTP+LLAFELCPKPTDRDGSLAN+PE WLSEWK +FPDLQKRLE PAWRAP A S DG A +NGGR DDAS EVTA+YLWGS TT
Sbjct: 53 DTPRGSRES-AGGPSATTTHDDSNFDGTGLHVWPGSRLLARFLAEPSGARRLFPQFVTRQPGCAPPLHGGGSSCDGQTGDMRATSSS---------NRKMTPSAEAAADGRRESSPRPRHRTAPHQDSRCVAVDQSSAPPTVLELGAGTGVCGMAASLSLGCSVVLTDRRSDILENLRKNINLNGLATRARVVRLEWGRKSRSCPAEIRELSPFKVILASDTVYPGKPFSDTEAFFAMAAELLDPEVGVLLLTYTPRQPSTCTENMLRCAYRAGLRGTALWNEHGDRWREGNDPRSLPAPRGVGSHNH-PLTDPRHGSAALKGVDFCPREQGSCPSSTCTTNGTNAVLDPRHAVKCPLEVDNGKGNNLAHPTQSGSP-RPCEDCSHPGTTPNKPPLRDTRPVPDGCTPILLAFELCPKPTDRDGSLANNPELAWLSEWKFVFPDLQKRLECRPAWRAPGAAWSQDGAGALKNNGGRWDDASAEGGEVTAEYLWGSSTT 538
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKP4_ECTSI) HSP 1 Score: 454 bits (1167), Expect = 9.720e-155 Identity = 245/337 (72.70%), Postives = 265/337 (78.64%), Query Frame = 1
Query: 1 ASQDTPGGSRESECGPPAATTTHDDTGFDGTGLHVWPGSRLLARFLADPSGARRLFPQLFANQPGCAPPLHSAGNNRDGQADDIHASSXXXXXXXXXXXNGKLAPSAAD---GGRESSTRPRHRTAPHQ---------RPAPTTVLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVYPGKPFSDAEAFFVMAAENLDPEVGVLLLTYTPRQPSTCTENMLRCAYRAGLRGTALLSEHGNRWRKGNDPRSLRATGGGGSHNNDPLTNPRHGTSAFKEVDFCRREQGIS 975
A QDTP GSRES G P ATTTH+D+ FDGTGLHVWPGSR LARFL DPSGARRLFPQ +QPGCA PLH AG++ DGQ DD+ + N K+ PSAA G RESS RPRHRTAPHQ R AP TVLELGAGTGVCGMTASLSLGC VVLTDRR DIL+NLR NI+LNGLA+RARV RLEWGR S SCPAEIR+LSPFKVIL SDTVYPGKPFSDAEAFF MAAE LDPEVG+LLLTYTPRQPSTCTENMLRCAYRAGLRGTAL ++HG+ W KGNDP SL A GG GSHN+ PL +PRHG+SAFK VD C R+Q S
Sbjct: 17 APQDTPRGSRES-AGGPCATTTHEDSNFDGTGLHVWPGSRFLARFLTDPSGARRLFPQFVTDQPGCATPLHGAGSSCDGQTDDMRVT----------FSNRKMTPSAAAAAAGRRESSPRPRHRTAPHQDYRCVAVDQRSAPPTVLELGAGTGVCGMTASLSLGCSVVLTDRRSDILENLRININLNGLATRARVARLEWGRNSISCPAEIRELSPFKVILGSDTVYPGKPFSDAEAFFAMAAELLDPEVGILLLTYTPRQPSTCTENMLRCAYRAGLRGTALWNDHGDFWHKGNDPHSLPAPGGVGSHNH-PLADPRHGSSAFKGVDSCPRKQAWS 341
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Putative (methyltransferase-domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN38_9STRA) HSP 1 Score: 86.7 bits (213), Expect = 6.090e-16 Identity = 57/139 (41.01%), Postives = 75/139 (53.96%), Query Frame = 1
Query: 397 VLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCP-AEIRKLSPFKVILASDTVYPGKPFSDAEAFFVMAAENLDPEVGVLLLTYTPRQPSTC---TENMLRCAYRAGLR 801
++ELGAGTG CG+ A+ G +LTD L LR N+ LNG+ +V RL W S P A +R + F V+LASD +YPG+ SD +FF MAA+ L + L L + S C T +L CAY G R
Sbjct: 44 LIELGAGTGACGLLAAKLCGIRTLLTDGEEGALHQLRANVRLNGVEGTTQVQRLAW-----SDPVANLRHM--FGVVLASDCLYPGQSPSDITSFFEMAAKLLTQDADALFLLSYVSRGSWCDAFTRKVLHCAYGTGFR 175
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Nicotinamide (n-methyltransferase n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GZ08_ACACA) HSP 1 Score: 70.1 bits (170), Expect = 7.260e-10 Identity = 50/128 (39.06%), Postives = 66/128 (51.56%), Query Frame = 1
Query: 397 VLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLN--GLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVYPGKPFSDAEAFFVM----AAENLDPEVG---VLLLTYTPRQPS 753
VLELGAGTG+ GM ASL LG VVLTD + L NLRRN++ N L V+ L WG S + +R+L PF ++ +D VY K + + A +L P + YTPR+ S
Sbjct: 83 VLELGAGTGIVGMVASL-LGADVVLTDGDEEALTNLRRNVEANHSDLRGSVTVMPLRWGEDSTA----VRELGPFDFVICADLVYGSKEEAHRALLATLRELAADASLSPPARHQMAIFFAYTPREVS 205
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Hypothetical (protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4F8Q7_CHRCT) HSP 1 Score: 61.6 bits (148), Expect = 1.060e-6 Identity = 47/119 (39.50%), Postives = 64/119 (53.78%), Query Frame = 1
Query: 397 VLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLS---PFKVILASDTVYPGKPFSDAEAFFVMAAENLDPEVGVLLLTYTPR 744
VLELGAGTG+ G++A+ ++G V LTDR+ ++L LR+NI +N L RA + LEWG C I L F +I+ SD +Y FS+ V + EV LL Y R
Sbjct: 189 VLELGAGTGIVGLSAA-AMGADVTLTDRQ-ELLPLLRKNIAVNALRERADALALEWG-----CDETIEALGRNVEFDLIVGSDLLYAPHSFSELLETIVRLSTPAHTEV---LLAYPTR 297
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Uncharacterized (protein n=2 Tax=Jatropha curcas TaxID=180498 RepID=A0A067LC29_JATCU) HSP 1 Score: 59.3 bits (142), Expect = 2.070e-6 Identity = 39/90 (43.33%), Postives = 54/90 (60.00%), Query Frame = 1
Query: 397 VLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVYPGKPFSD 666
VLELGAGTG+ G+TA+ LVVLTD +L L +N+++N LA+R V L WG S ++I +L F VIL SD + + S+
Sbjct: 58 VLELGAGTGLPGLTAARLGASLVVLTDIA-PLLPGLLKNVEVNVLANRVMVRELAWG--SEELLSQISELGEFDVILMSDLFFDPEEMSN 144
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tetracentron sinense TaxID=13715 RepID=A0A835DUC5_9MAGN) HSP 1 Score: 59.3 bits (142), Expect = 2.180e-6 Identity = 35/83 (42.17%), Postives = 49/83 (59.04%), Query Frame = 1
Query: 397 VLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVY 645
V+ELGAGTG+ G+TA+L V+LTD +L L+RN++ NGL R V L WG CP+ +L+ ++L SD Y
Sbjct: 61 VIELGAGTGLPGLTAALLGAERVILTDVAL-LLPGLQRNVEANGLRDRVEVRELVWG-SDEECPSHGGELAEVDLVLMSDVFY 141
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Methyltransferase-like (protein 23 n=1 Tax=Sarcoptes scabiei TaxID=52283 RepID=A0A834V9P4_SARSC) HSP 1 Score: 58.5 bits (140), Expect = 4.190e-6 Identity = 42/129 (32.56%), Postives = 62/129 (48.06%), Query Frame = 1
Query: 388 PTTVLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVYPGKPFSDAEAFFVMAAENLDPEVGVLLLTYTPRQPSTCTENML 774
P T+LELG+GTG+CG+ A+ + V+LTD+ D +++NI NG+ + LEWG +R P I+ SD Y F ENL V L+ + PS+ TE++L
Sbjct: 65 PKTLLELGSGTGLCGIFAA-KICSKVILTDQESCDFDLMKKNIQRNGVEKNCFIFSLEWGNMNRLAEILASNEYPIDCIIGSDLCYDESQF-----------ENLFLTVAYLMKAL--KSPSSPTESIL 179
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Colocasia esculenta TaxID=4460 RepID=A0A843UVG8_COLES) HSP 1 Score: 59.3 bits (142), Expect = 5.500e-6 Identity = 41/93 (44.09%), Postives = 51/93 (54.84%), Query Frame = 1
Query: 367 APHQRPAPTTVLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVY 645
AP A TVLELGAGTG+ G+TA+L VVLTD+ +L LR N +NGLA R V L WG + + + P V+L SD Y
Sbjct: 155 APPHHLADKTVLELGAGTGLPGLTAALLGAARVVLTDQA-PLLPGLRTNAAVNGLADRVEVRELSWGTGGE----DPKWVPPPDVVLMSDVFY 242
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Match: Uncharacterized (protein n=1 Tax=Nyssa sinensis TaxID=561372 RepID=A0A5J5A4X8_9ASTE) HSP 1 Score: 57.8 bits (138), Expect = 6.590e-6 Identity = 33/83 (39.76%), Postives = 51/83 (61.45%), Query Frame = 1
Query: 397 VLELGAGTGVCGMTASLSLGCLVVLTDRRRDILDNLRRNIDLNGLASRARVVRLEWGRKSRSCPAEIRKLSPFKVILASDTVY 645
VLELGAGTG+ G+TA+L V+LTD + ++ L++N++ NGL R V +L WG S P+ + +L ++L SD +
Sbjct: 48 VLELGAGTGLPGLTAALLGASRVILTDVEQ-LVPCLKKNVEANGLGDRVEVTQLVWG--SDDFPSRLGELGEVGLVLMSDVFF 127 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7365.15552.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7365.15552.1 >prot_E_fasciculatus_S2_contig7365.15552.1 ID=prot_E_fasciculatus_S2_contig7365.15552.1|Name=mRNA_E_fasciculatus_S2_contig7365.15552.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=488bp ASQDTPGGSRESECGPPAATTTHDDTGFDGTGLHVWPGSRLLARFLADPSback to top mRNA from alignment at E_fasciculatus_S2_contig7365:5094..7448- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7365.15552.1 ID=mRNA_E_fasciculatus_S2_contig7365.15552.1|Name=mRNA_E_fasciculatus_S2_contig7365.15552.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2355bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7365:5094..7448- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7365:5094..7448- >mRNA_E_fasciculatus_S2_contig7365.15552.1 ID=mRNA_E_fasciculatus_S2_contig7365.15552.1|Name=mRNA_E_fasciculatus_S2_contig7365.15552.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1464bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7365:5094..7448- (Ectocarpus fasciculatus EfasUO2)back to top |