mRNA_E_fasciculatus_S2_contig736.15547.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Glutamine (amidotransferase type-2 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXW2_9PHAE) HSP 1 Score: 320 bits (820), Expect = 4.100e-99 Identity = 197/283 (69.61%), Postives = 209/283 (73.85%), Query Frame = 3
Query: 3 QLSAQEISQVLRRTISRIVSTVASFSATPCPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASVAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRLTAPEPRTSIVISSEPLCRSTKSWELVPRNSMVIVEGAAPAATPATVDTASTAASGNTKTADRAVASDDGNDHGPIATSSTAAPPSAGAGAVAA--PVSTAGTPAIPLGLGLVSSIKYEPLRCHSSDSPPSDDPAFPDPALLPTSCARVGRSGSRRAGAGT 845
QLSAQEISQVLRRTI+RIVS VAS SA+PCP XXXXXXXXX +++ APAMSLNFCVTDGRHIVCSRYRSHARQ+PPSLFVLAGAG ACDEAG LR TA EPRTS+VISSEPLCRSTKSWELVPRNSMVIVEGA P A PAT DTA AA+ NT+TAD AVA++DG DHG IATSST S PVST G PL +GLVSSIKYEPLRCH SDSP S DP FPDP LLPT CARV SGSRRAGAGT
Sbjct: 162 QLSAQEISQVLRRTIARIVSAVASLSASPCP---XXXXXXXXXAPSTSGHDGGPTTSLPDAASVRGGSSASAAAPAMSLNFCVTDGRHIVCSRYRSHARQNPPSLFVLAGAGFACDEAGCLRQTATEPRTSVVISSEPLCRSTKSWELVPRNSMVIVEGATPTAIPATADTAPIAANSNTETADIAVAAEDGTDHGTIATSSTDVSSSXXXXXXXXXXPVSTTGAREKPLRMGLVSSIKYEPLRCHPSDSPASHDPIFPDPVLLPTFCARVPSSGSRRAGAGT 441
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKF2_ECTSI) HSP 1 Score: 137 bits (345), Expect = 2.080e-30 Identity = 106/126 (84.13%), Postives = 110/126 (87.30%), Query Frame = 3
Query: 3 QLSAQEISQVLRRTISRIVSTVASFSATPCPPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRSASVAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRLTAP 380
QLSAQEIS+VLRRTI+RIVS VAS SA+ CPP XXXXXXXXXXXX XXXXXXXXXXXXXXXX + APAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAG LRLTAP
Sbjct: 168 QLSAQEISKVLRRTIARIVSAVASLSASTCPPX---XXXXXXXXXXXXGHDGXXXXXXXXXXXXXXXXXXXAAAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGCLRLTAP 290
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Nucleophile (aminohydrolase (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZAJ1_9STRA) HSP 1 Score: 82.8 bits (203), Expect = 8.250e-14 Identity = 41/87 (47.13%), Postives = 56/87 (64.37%), Query Frame = 3
Query: 213 ASVAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRLTAPEPRTSIVISSEPLC-RSTKSWELVPRNSMVI 470
A + A SLN VT+G H+V SRYR+ + PPSL++ G+GLA + LR P +VISSEPLC RS + W +VP+N+MV+
Sbjct: 201 AGIVHASSLNMAVTNGLHVVVSRYRNSPTEQPPSLYMSHGSGLAVGDDNCLRFARPHGVGGVVISSEPLCSRSLERWSIVPKNTMVV 287
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Putative (glutamine amidotransferase DUG3 n=1 Tax=Smittium mucronatum TaxID=133383 RepID=A0A1R0H3A5_9FUNG) HSP 1 Score: 58.2 bits (139), Expect = 7.450e-7 Identity = 28/80 (35.00%), Postives = 45/80 (56.25%), Query Frame = 3
Query: 237 LNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRLTAPEPR-TSIVISSEPLCRSTKSWELVPRNSMVIV 473
+NF VTDG +VC+RY + + D SLF +G+ D G ++ R T+ VI+SEPL W +P N+++++
Sbjct: 1 MNFAVTDGVSVVCTRYITSKKYDAASLFFSSGSEFKSDSDGQYKMVRSNKRDTTFVIASEPLTFERNDWISIPTNTLLVI 80
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: N-terminal (nucleophile aminohydrolase n=1 Tax=Jaminaea rosea TaxID=1569628 RepID=A0A316V2F2_9BASI) HSP 1 Score: 63.2 bits (152), Expect = 7.740e-7 Identity = 35/90 (38.89%), Postives = 48/90 (53.33%), Query Frame = 3
Query: 207 RSASVAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRLTAPEPRTSIVI-SSEPLCRSTKSWELVPRNSMVIV 473
R V +NFCVTDG+ IVC+RY S + SL+ +G E G R+ + R +IV+ +SEPL W VP N+M+IV
Sbjct: 257 REKGVEEPSLMNFCVTDGQSIVCTRYVSSLHDEAASLYFSSGTSFYEREKGRFRMRKEDRRQNIVVVASEPLTFEKADWMEVPTNTMIIV 346
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Glutamine (amidotransferase type-2 domain-containing protein n=1 Tax=Plicaturopsis crispa FD-325 SS-3 TaxID=944288 RepID=A0A0C9T6T1_PLICR) HSP 1 Score: 61.2 bits (147), Expect = 2.110e-6 Identity = 34/105 (32.38%), Postives = 51/105 (48.57%), Query Frame = 3
Query: 228 AMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLAC-------------------DEAGSLRLTAPEPRTS---IVISSEPLCRSTKSWELVPRNSMVIVE 476
A SLN C TDG +V RYR+HA + PPSL+V AG+ D GS R EP ++++SEP SW+L+ +N +++++
Sbjct: 251 ANSLNLCTTDGEQMVAVRYRNHATEQPPSLYVSTRAGVVLNRKFVNVENDNNVTPQQFTDNVGSARELEHEPNDHGLHVIVASEPTTFDVDSWKLLDKNDIIMID 355
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Glutamine (amidotransferase type-2 domain-containing protein n=2 Tax=Allomyces macrogynus (strain ATCC 38327) TaxID=578462 RepID=A0A0L0T219_ALLM3) HSP 1 Score: 60.8 bits (146), Expect = 2.160e-6 Identity = 32/89 (35.96%), Postives = 51/89 (57.30%), Query Frame = 3
Query: 210 SASVAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRL-TAPEPRTSIVISSEPLCRSTKSWELVPRNSMVIV 473
SA + LNF VTDGR IVC+RY + + ++ SL+ +G+ CDE ++ A + ++ISSEPL + W +P N++ +V
Sbjct: 192 SAGIDTPSLLNFAVTDGRSIVCTRYTNCSDREAASLYWSSGSKFTCDENNEYQMHKAAKKEDIVIISSEPLTFTKSDWCKIPDNTLFMV 280
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: N-terminal (nucleophile aminohydrolase n=1 Tax=Epithele typhae TaxID=378194 RepID=UPI002007DD59) HSP 1 Score: 60.5 bits (145), Expect = 3.220e-6 Identity = 34/93 (36.56%), Postives = 51/93 (54.84%), Query Frame = 3
Query: 234 SLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACD------------EAGSLRL-TAPEPRTSIVISSEPLCRSTKSWELVPRNSMVIV 473
SLN VTDG ++ R+R+HA Q PPSL++ AG+A + + GS L A E ++++SEP + WEL+P+N V+V
Sbjct: 231 SLNVAVTDGEQLLAIRFRNHATQHPPSLYLSTRAGVALNRKFPGHPDVEGVDNGSQNLKAADEHGDHVIVASEPTTFRKEDWELIPKNEYVMV 323
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Glutamine (amidotransferase type-2 domain-containing protein n=1 Tax=Smittium megazygosporum TaxID=133381 RepID=A0A2T9ZL54_9FUNG) HSP 1 Score: 60.1 bits (144), Expect = 3.290e-6 Identity = 32/90 (35.56%), Postives = 48/90 (53.33%), Query Frame = 3
Query: 207 RSASVAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRLTAPEPRT-SIVISSEPLCRSTKSWELVPRNSMVIV 473
+ A V LNF VTDG +VC+RY S + SLF +G+ + G R+ R S+VI+SEPL W ++P N++++V
Sbjct: 189 KDAGVTEPSLLNFAVTDGDTVVCTRYISSCTLEAASLFFSSGSEFKSEIGGGYRMIRANKRDKSVVIASEPLTFERNDWLIIPTNTLLVV 278
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Match: Glutamine (amidotransferase type-2 domain-containing protein n=2 Tax=Trametes TaxID=5324 RepID=A0A1M2W1B1_TRAPU) HSP 1 Score: 60.5 bits (145), Expect = 3.300e-6 Identity = 33/103 (32.04%), Postives = 53/103 (51.46%), Query Frame = 3
Query: 207 RSASVAPAMSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDE--------------AGSLRLTAPEPRTSIVISSEPLCRSTKSWELVPRNSMVIV 473
R+ A SLN VTDG ++ R+R+HA + PPSL++ AG+A + AG+ R E ++++SEP + WEL+P+N ++V
Sbjct: 226 RAGKPVEASSLNIAVTDGEQLLAIRFRNHATEHPPSLYLSTRAGVALNTKYPGHPDVAGADNGAGNFRAE-EEHGDHVIVASEPTTYREEDWELIPKNQCIMV 327 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig736.15547.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig736.15547.1 >prot_E_fasciculatus_S2_contig736.15547.1 ID=prot_E_fasciculatus_S2_contig736.15547.1|Name=mRNA_E_fasciculatus_S2_contig736.15547.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=212bp MSLNFCVTDGRHIVCSRYRSHARQDPPSLFVLAGAGLACDEAGSLRLTAPback to top mRNA from alignment at E_fasciculatus_S2_contig736:22630..25509+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig736.15547.1 ID=mRNA_E_fasciculatus_S2_contig736.15547.1|Name=mRNA_E_fasciculatus_S2_contig736.15547.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2880bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig736:22630..25509+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig736:22630..25509+ >mRNA_E_fasciculatus_S2_contig736.15547.1 ID=mRNA_E_fasciculatus_S2_contig736.15547.1|Name=mRNA_E_fasciculatus_S2_contig736.15547.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=636bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig736:22630..25509+ (Ectocarpus fasciculatus EfasUO2)back to top |