mRNA_E_fasciculatus_S2_contig735.15538.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: SUN (domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LTA6_ECTSI) HSP 1 Score: 385 bits (990), Expect = 2.340e-133 Identity = 214/263 (81.37%), Postives = 217/263 (82.51%), Query Frame = 1
Query: 1 MAAAAAPAAAT-RPMVPDMEDDGA-QPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHGPNDVA------PGSAPKSPGAETAP 765
MAAAAA AAAT R MVPD+EDDGA QPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSA AHGP V+ PGSAPKSPG +TAP
Sbjct: 1 MAAAAASAAATARAMVPDVEDDGAKQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAVGTVGAGAGVGGGAADTTVEALASEGGGG----AHGPTGVSNVEPATPGSAPKSPGVQTAP 259
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: SUN (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRG7_9PHAE) HSP 1 Score: 373 bits (957), Expect = 1.370e-117 Identity = 199/245 (81.22%), Postives = 202/245 (82.45%), Query Frame = 1
Query: 49 DMEDDGAQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAHGPNDVA------PGSAPKSPGAETAP 765
DM+DDGAQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSA AHGP + PGSAPKS GA+TAP
Sbjct: 194 DMDDDGAQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKDPKPSAVATVGAGAGGEESAADTTVEALASEGGGG----AHGPTGASNVEPATPGSAPKSAGAQTAP 434
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: UNC-like (C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLS6_9STRA) HSP 1 Score: 243 bits (620), Expect = 1.590e-78 Identity = 115/168 (68.45%), Postives = 141/168 (83.93%), Query Frame = 1
Query: 40 MVPDMED-DGAQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQS 540
MVPD E+ D A+ K L+NYAS+DSGAV++E SP +KG NLL+DSKDKY ISPCE+KQW V+GLSEDILVR++ +GS+EKYS ++KEFQVLASQ++PV+ W+DLG FTA GEQTFE+P PAFARYLKFK LSHYGD++YCT+S V+VHGSTMLESF +WQ S
Sbjct: 1 MVPDKEEGDSAKLKPTKLKNYASKDSGAVMMEHSPGTKGADNLLVDSKDKYTISPCEEKQWVVIGLSEDILVRTIKLGSYEKYSRIVKEFQVLASQSFPVDNWMDLGVFTAADAHGEQTFELPSPAFARYLKFKLLSHYGDDYYCTLSHVRVHGSTMLESFHEDWQAS 168
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: SUN (domain-containing protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8CB42_THAPS) HSP 1 Score: 195 bits (495), Expect = 3.500e-53 Identity = 98/175 (56.00%), Postives = 131/175 (74.86%), Query Frame = 1
Query: 43 VPDMEDDGAQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNE--WLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREV 561
+PD +DG PK L +YAS+ +GA +LE SP+ KG NLL DKYAI+PCE+K++ V+GLSEDILV+ + + ++E+YSS ++EFQVLASQ YP W DLGT+TA GEQTFE+ +PA+ARYLKF+F+SHYG E YCT+SQ+KVHGSTML+ F +W +S + RE+
Sbjct: 293 IPDEGEDG--PKEHVLVDYASKLAGAQILEKSPSLKGTSNLLTGDIDKYAIAPCEEKKYVVIGLSEDILVKRIKLSNYERYSSHVREFQVLASQEYPAPSEYWNDLGTYTALSKSGEQTFELNEPAWARYLKFRFMSHYGKEHYCTLSQIKVHGSTMLQGFHEQWIESEKKDREL 465
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: Hypothetical (protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UMH9_9STRA) HSP 1 Score: 189 bits (480), Expect = 6.780e-53 Identity = 88/171 (51.46%), Postives = 126/171 (73.68%), Query Frame = 1
Query: 46 PDMEDDGAQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVRE 558
P +++G + RV L +YA++ SGA++LE SP KG NLL D D+YAI+PCEDK++ V+GLSEDILV+ + + ++E+YSS +KEF + S T + +W ++GTFTAK GEQ+F++ +P +ARYLKF+F +HYG E YCT+SQ+KVHGSTML+ F +WQ S E +
Sbjct: 160 PHDDEEGGKMSRVTL-DYANKSSGALILEKSPTMKGSSNLLNDDMDRYAIAPCEDKKYVVVGLSEDILVKQVFLANYERYSSHVKEFTIFGSTTMLMGDWAEVGTFTAKPRNGEQSFDLTEPVWARYLKFRFTTHYGSEHYCTLSQIKVHGSTMLQGFHEQWQASEEETED 329
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: Hypothetical (protein n=2 Tax=Cyclophora tenuis TaxID=216820 RepID=A0A7S1D9Q2_CYCTE) HSP 1 Score: 189 bits (479), Expect = 3.370e-51 Identity = 92/168 (54.76%), Postives = 126/168 (75.00%), Query Frame = 1
Query: 46 PDMEDDGAQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAE 549
P+ EDDG P + +YAS +GA++LE SP KG NLL +KDKYAISPCE+K++ V+GLSEDILV+ + + ++E+YSS +K+FQ+L SQT + +W++LGT+TA G+Q F++ QP++ARYLKF+FLSHYG E YCT+SQ+ VHGST L+ F EWQ S E
Sbjct: 205 PEDEDDG--PSEIVTVDYASTTAGALILEKSPHMKGTSNLLNGNKDKYAISPCEEKKFVVIGLSEDILVKQVCLANYERYSSRVKDFQILGSQT--MGKWVNLGTYTADPNNGQQKFDLGQPSWARYLKFRFLSHYGSEHYCTISQIMVHGSTQLQGFHEEWQDSKDE 368
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3GXC2_9STRA) HSP 1 Score: 177 bits (450), Expect = 1.340e-50 Identity = 95/188 (50.53%), Postives = 132/188 (70.21%), Query Frame = 1
Query: 40 MVPDMEDD---GAQPKR-VNLQNYASRDSGAVLLEASPAS-KGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQ-PAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEWQQSSAEVREVQDFMMKKD 585
+V D +DD + KR V + N+AS+ +GAV+L+ SPAS KG LL D KDKY ISPCE+K+W V+GLSEDIL+ S+ + ++EKYSS LK+FQ+LAS +YP +EW++LG +TAK G Q F + A RYLK KFL+HY DE CT+SQ+KV G T++ SFQ E Q+S +R++ + + +D
Sbjct: 27 IVKDKDDDDEANTKAKRAVKMFNFASQSAGAVILDKSPASAKGFHYLLNDDKDKYGISPCEEKKWVVIGLSEDILITSIEVSNYEKYSSTLKDFQLLASYSYPTDEWINLGQYTAKPQLGAQLFNVTDNEAHTRYLKVKFLTHYSDEALCTLSQIKVFGVTVIASFQQEVQRSDTNMRDMLNQISSED 214
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: SUN (domain-containing protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SF98_9ARCH) HSP 1 Score: 167 bits (424), Expect = 4.000e-48 Identity = 82/147 (55.78%), Postives = 114/147 (77.55%), Query Frame = 1
Query: 85 NLQNYASRDSGAVLLEASPAS-KGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQ--PAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLES 516
NL N+AS +GAV+L++SP+S KG NLL KDKY+ISPC +K+W V+GLSEDI + S+V+ ++E+YSSL+K+FQ+LAS +YP +EW+DLGT+TA+ GEQTF I Q + RYL+ +F +HY DE CT+SQ+KVHG T++ S
Sbjct: 48 NLFNFASATAGAVVLDSSPSSAKGYYNLLNSDKDKYSISPCSEKRWVVIGLSEDIQITSVVLANYERYSSLVKDFQLLASGSYPTSEWIDLGTYTAEPKLGEQTFNITQLSTGYTRYLRVRFQTHYLDEALCTLSQIKVHGLTIIAS 194
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TP62_9STRA) HSP 1 Score: 169 bits (428), Expect = 4.110e-48 Identity = 82/151 (54.30%), Postives = 117/151 (77.48%), Query Frame = 1
Query: 67 AQPKRVNLQNYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCE-DKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLES 516
A P+RVN YAS+++GA+ L +SPA KG LL ++DKYAI PC +++W V+GLSEDI+V+S + + E+YSS+ E ++LA+ TYP +W DLG + A+FV+GEQTFE+P A+ARYLK +FLSH+G E+YCT+S+VKVHG T++E+
Sbjct: 38 AAPRRVN---YASKEAGALSLGSSPALKGASALLEKNQDKYAIVPCTAEERWVVIGLSEDIMVKSFSMANFEQYSSMFHEVRLLAATTYPTEKWADLGVYAAEFVRGEQTFEVPGGAWARYLKLEFLSHHGVEYYCTLSEVKVHGETLVEN 185
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Match: Hypothetical (protein n=2 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4IV93_9STRA) HSP 1 Score: 179 bits (453), Expect = 1.330e-47 Identity = 82/146 (56.16%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 94 NYASRDSGAVLLEASPASKGMQNLLLDSKDKYAISPCEDKQWAVLGLSEDILVRSLVIGSHEKYSSLLKEFQVLASQTYPVNEWLDLGTFTAKFVQGEQTFEIPQPAFARYLKFKFLSHYGDEFYCTVSQVKVHGSTMLESFQHEW 531
+YA+++SGA++LE SP+ KG NLL D+YAI+PCED+++ V+GLSEDILV+ + + ++E+YSS +EFQVL SQT ++W DLGTF A GEQ+FE+ +PA+ARYLKF+ L+HYG E YCTV+Q+KVHGSTM + F +W
Sbjct: 133 DYANKNSGAIILEKSPSMKGTSNLLKSDNDQYAIAPCEDRKFVVVGLSEDILVKQIKLSNYERYSSHPREFQVLGSQTNTGSDWADLGTFIADPGNGEQSFELDEPAWARYLKFRLLTHYGAEHYCTVTQIKVHGSTMTQGFHEQW 278 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig735.15538.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig735.15538.1 >prot_E_fasciculatus_S2_contig735.15538.1 ID=prot_E_fasciculatus_S2_contig735.15538.1|Name=mRNA_E_fasciculatus_S2_contig735.15538.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=255bp MAAAAAPAAATRPMVPDMEDDGAQPKRVNLQNYASRDSGAVLLEASPASKback to top mRNA from alignment at E_fasciculatus_S2_contig735:8364..10408- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig735.15538.1 ID=mRNA_E_fasciculatus_S2_contig735.15538.1|Name=mRNA_E_fasciculatus_S2_contig735.15538.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2045bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig735:8364..10408- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig735:8364..10408- >mRNA_E_fasciculatus_S2_contig735.15538.1 ID=mRNA_E_fasciculatus_S2_contig735.15538.1|Name=mRNA_E_fasciculatus_S2_contig735.15538.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=765bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig735:8364..10408- (Ectocarpus fasciculatus EfasUO2)back to top |