prot_E_fasciculatus_S2_contig733.15519.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig733.15519.1
Unique Nameprot_E_fasciculatus_S2_contig733.15519.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length100
Homology
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: D7FQ30_ECTSI (Dynein light chain n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQ30_ECTSI)

HSP 1 Score: 201 bits (511), Expect = 6.210e-65
Identity = 98/98 (100.00%), Postives = 98/98 (100.00%), Query Frame = 0
Query:    1 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVVMSV 98
            MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVVMSV
Sbjct:    1 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVVMSV 98          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A6H5JF01_9PHAE (Dynein light chain n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF01_9PHAE)

HSP 1 Score: 197 bits (500), Expect = 9.240e-64
Identity = 95/97 (97.94%), Postives = 96/97 (98.97%), Query Frame = 0
Query:    1 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVVMS 97
            MSNKHQHIFAEDMSDEMC FALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWV+MS
Sbjct:    1 MSNKHQHIFAEDMSDEMCHFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVLMS 97          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A836CC04_9STRA (Dynein light chain n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CC04_9STRA)

HSP 1 Score: 166 bits (421), Expect = 7.160e-52
Identity = 76/92 (82.61%), Postives = 87/92 (94.57%), Query Frame = 0
Query:    1 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
            M+NKHQHIFAEDM+D+MCQFAL+TS+EAF LTI KGQVFT IAS IR+ FEK+YGRGWNVVVGR+FGAYVTHEIKTYMYFTV+PGVYVL+W+
Sbjct:    1 MANKHQHIFAEDMTDDMCQFALKTSEEAFHLTINKGQVFTAIASYIRRTFEKTYGRGWNVVVGRAFGAYVTHEIKTYMYFTVIPGVYVLIWK 92          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A482S6R4_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482S6R4_9ARCH)

HSP 1 Score: 115 bits (289), Expect = 2.710e-31
Identity = 53/85 (62.35%), Postives = 68/85 (80.00%), Query Frame = 0
Query:    8 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
            +FAEDMS+E  + A++ +++AF LTI  G V +TIA  IRK F++ + RGWN +VGRSFGAYVTHEIKTY+YFTV PG YVLLW+
Sbjct:   44 VFAEDMSEEWSKDAIKAARDAFALTIASGDVHSTIADFIRKKFDRDHERGWNCIVGRSFGAYVTHEIKTYIYFTVQPGTYVLLWK 128          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A7S4E7C9_9STRA (Dynein light chain n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4E7C9_9STRA)

HSP 1 Score: 112 bits (280), Expect = 4.090e-30
Identity = 53/92 (57.61%), Postives = 69/92 (75.00%), Query Frame = 0
Query:    1 MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
            M+   Q +FAEDMS+E   F LE + +AF     +G+V++ +A+ IR A EK YG+GWNVVVG+SFGA+VTHEIKTY Y +VVPGV VL+WR
Sbjct:    1 MAKATQQVFAEDMSEEKVDFCLEIATDAFNQASFQGKVYSYVANFIRAALEKQYGKGWNVVVGKSFGAFVTHEIKTYFYGSVVPGVCVLIWR 92          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A485KYL8_9STRA (Dynein light chain n=8 Tax=Saprolegniaceae TaxID=4764 RepID=A0A485KYL8_9STRA)

HSP 1 Score: 111 bits (277), Expect = 7.340e-30
Identity = 50/85 (58.82%), Postives = 66/85 (77.65%), Query Frame = 0
Query:    8 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
            +FAEDM+D M +  + T+++AFQL +  G+ F+TIA  +R+  EK YGRGWN +VG SFGAYVTHEIKTY+YF+V  GV VL+WR
Sbjct:   13 VFAEDMTDVMLEKVVATAKDAFQLQVASGKTFSTIAEFVRRNMEKEYGRGWNCIVGLSFGAYVTHEIKTYVYFSVASGVSVLVWR 97          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A0P1AY91_PLAHL (Dynein light chain n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AY91_PLAHL)

HSP 1 Score: 110 bits (274), Expect = 2.160e-29
Identity = 51/85 (60.00%), Postives = 65/85 (76.47%), Query Frame = 0
Query:    8 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
            +FAEDM+D M    L T+++AFQL +T  + F+TIA  +R+  EK YGRGWN VVG SFGAYVTHEIKTY+YF+V  GV VL+W+
Sbjct:   14 VFAEDMTDAMLDKVLSTAKDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAIGVSVLVWK 98          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: H3HCG0_PHYRM (Dynein light chain n=21 Tax=Oomycota TaxID=4762 RepID=H3HCG0_PHYRM)

HSP 1 Score: 107 bits (266), Expect = 3.180e-28
Identity = 51/82 (62.20%), Postives = 64/82 (78.05%), Query Frame = 0
Query:    8 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVL 89
            +FAEDM+D M + AL T+++AFQL +T  + F+TIA  +R+  EK YGRGWN VVG SFGAYVTHEIKTY+YF+V  GV VL
Sbjct:   14 VFAEDMTDAMLEKALGTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVL 95          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A7S3H299_9STRA (Dynein light chain n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3H299_9STRA)

HSP 1 Score: 107 bits (266), Expect = 5.980e-28
Identity = 50/85 (58.82%), Postives = 64/85 (75.29%), Query Frame = 0
Query:    8 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
            +FAEDMS+E  + A + +++AF +TI+ G   +TIA  IRK F+  +  GWN +VGRSFGAYVTHEIKTY YF+V PG YVLLWR
Sbjct:   32 VFAEDMSEEWARDAQKIARDAFAITISSGDAHSTIADFIRKKFDVGHMAGWNCIVGRSFGAYVTHEIKTYTYFSVQPGTYVLLWR 116          
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Match: A0A225VFG7_9STRA (Dynein light chain n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VFG7_9STRA)

HSP 1 Score: 112 bits (281), Expect = 9.230e-28
Identity = 52/85 (61.18%), Postives = 67/85 (78.82%), Query Frame = 0
Query:    8 IFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAFEKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWR 92
            +FAEDM+D M + AL T+++AFQL +T  + F+TIA  +R+  EK YGRGWN VVG SFGAYVTHEIKTY+YF+V  GV VL+W+
Sbjct:   14 VFAEDMTDVMLEKALSTARDAFQLQVTSEKTFSTIAEFVRRNMEKEYGRGWNCVVGSSFGAYVTHEIKTYVYFSVAAGVSVLVWK 98          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig733.15519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FQ30_ECTSI6.210e-65100.00Dynein light chain n=1 Tax=Ectocarpus siliculosus ... [more]
A0A6H5JF01_9PHAE9.240e-6497.94Dynein light chain n=1 Tax=Ectocarpus sp. CCAP 131... [more]
A0A836CC04_9STRA7.160e-5282.61Dynein light chain n=1 Tax=Tribonema minus TaxID=3... [more]
A0A482S6R4_9ARCH2.710e-3162.35Uncharacterized protein n=1 Tax=archaeon TaxID=190... [more]
A0A7S4E7C9_9STRA4.090e-3057.61Dynein light chain n=1 Tax=Pelagomonas calceolata ... [more]
A0A485KYL8_9STRA7.340e-3058.82Dynein light chain n=8 Tax=Saprolegniaceae TaxID=4... [more]
A0A0P1AY91_PLAHL2.160e-2960.00Dynein light chain n=1 Tax=Plasmopara halstedii Ta... [more]
H3HCG0_PHYRM3.180e-2862.20Dynein light chain n=21 Tax=Oomycota TaxID=4762 Re... [more]
A0A7S3H299_9STRA5.980e-2858.82Dynein light chain n=1 Tax=Spumella elongata TaxID... [more]
A0A225VFG7_9STRA9.230e-2861.18Dynein light chain n=1 Tax=Phytophthora megakarya ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001372Dynein light chain, type 1/2SMARTSM01375Dynein_light_2coord: 1..93
e-value: 1.3E-27
score: 107.8
IPR001372Dynein light chain, type 1/2PFAMPF01221Dynein_lightcoord: 8..92
e-value: 1.6E-24
score: 86.0
IPR001372Dynein light chain, type 1/2PANTHERPTHR11886DYNEIN LIGHT CHAINcoord: 7..92
IPR037177Dynein light chain superfamilyGENE3D3.30.740.10coord: 1..93
e-value: 5.8E-24
score: 85.9
IPR037177Dynein light chain superfamilySUPERFAMILY54648DLCcoord: 4..92
NoneNo IPR availablePANTHERPTHR11886:SF64coord: 7..92
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..94
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 95..99
NoneNo IPR availableTMHMMTMhelixcoord: 76..95

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig733contigE_fasciculatus_S2_contig733:19483..20520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig733.15519.1mRNA_E_fasciculatus_S2_contig733.15519.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig733 19483..20619 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig733.15519.1 ID=prot_E_fasciculatus_S2_contig733.15519.1|Name=mRNA_E_fasciculatus_S2_contig733.15519.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=100bp
MSNKHQHIFAEDMSDEMCQFALETSQEAFQLTITKGQVFTTIASCIRKAF
EKSYGRGWNVVVGRSFGAYVTHEIKTYMYFTVVPGVYVLLWRWVVMSVS*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR037177DLC_sf
IPR001372Dynein_light_chain_typ-1/2