prot_E_fasciculatus_S2_contig7320.15513.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7320.15513.1
Unique Name	prot_E_fasciculatus_S2_contig7320.15513.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	118

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7320.15513.1 vs. uniprot
Match: D8LQA9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQA9_ECTSI)

HSP 1 Score: 195 bits (495), Expect = 3.690e-62
Identity = 102/117 (87.18%), Postives = 109/117 (93.16%), Query Frame = 0

Query:    1 LFLFSQFQGIVLARRLHFVGQVWNIVWSTLVLFGFFREGNALSIIVALIIYPIFVFYMACFLRLLSELSVSVLLLPSLLAKSQGQGGRGAVAEPVGRGDADLAAYGVSGVDDSGTIV 117
            LF+F  FQGIVLARRLHFVGQVWN+VWSTLVLFG  REG AL IIVA+I+YPIFVFYMACFLRL+SEL+VSVLLLPSLLAKSQG GGRGAVAEPVG GDADLAAYGVSGVDD+GTIV
Sbjct:   26 LFVFRHFQGIVLARRLHFVGQVWNVVWSTLVLFGILREGTALGIIVAIIVYPIFVFYMACFLRLMSELAVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDDAGTIV 142

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BLAST of mRNA_E_fasciculatus_S2_contig7320.15513.1 vs. uniprot
Match: A0A6H5L548_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L548_9PHAE)

HSP 1 Score: 185 bits (469), Expect = 3.380e-58
Identity = 99/117 (84.62%), Postives = 106/117 (90.60%), Query Frame = 0

Query:    1 LFLFSQFQGIVLARRLHFVGQVWNIVWSTLVLFGFFREGNALSIIVALIIYPIFVFYMACFLRLLSELSVSVLLLPSLLAKSQGQGGRGAVAEPVGRGDADLAAYGVSGVDDSGTIV 117
            LF F  FQGIVLARRLH+V QVWN+VWSTLVL   FREGN L+IIVA+IIYPIFVFYMACFLRL+SEL+VSVLLLPSLLAKSQG GGRGAVAEPVG GDADLAAYGVSGVD +GTIV
Sbjct:   26 LFAFRHFQGIVLARRLHYVAQVWNVVWSTLVLSTVFREGNPLAIIVAIIIYPIFVFYMACFLRLMSELTVSVLLLPSLLAKSQGNGGRGAVAEPVGVGDADLAAYGVSGVDGAGTIV 142

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7320.15513.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7320.15513.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LQA9_ECTSI	3.690e-62	87.18	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
A0A6H5L548_9PHAE	3.380e-58	84.62	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 66..117
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 42..65
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..36
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 37..41
None	No IPR available	TMHMM	TMhelix		coord: 15..37
None	No IPR available	TMHMM	TMhelix		coord: 44..66

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7320	contig	E_fasciculatus_S2_contig7320:7147..7500 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7320.15513.1	mRNA_E_fasciculatus_S2_contig7320.15513.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7320 7147..7500 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7320.15513.1 ID=prot_E_fasciculatus_S2_contig7320.15513.1|Name=mRNA_E_fasciculatus_S2_contig7320.15513.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=118bp
LFLFSQFQGIVLARRLHFVGQVWNIVWSTLVLFGFFREGNALSIIVALII
YPIFVFYMACFLRLLSELSVSVLLLPSLLAKSQGQGGRGAVAEPVGRGDA
DLAAYGVSGVDDSGTIV*