mRNA_E_fasciculatus_S2_contig7318.15508.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7318.15508.1
Unique NamemRNA_E_fasciculatus_S2_contig7318.15508.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: AB (hydrolase-1 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5L4T2_9PHAE)

HSP 1 Score: 460 bits (1184), Expect = 1.310e-161
Identity = 221/241 (91.70%), Postives = 229/241 (95.02%), Query Frame = 1
Query:    4 DMLVRGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEGTRNFPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNLDAAEK 726
            ++  RGFPAYCADLTRFGWITGLLPSA SPEY KGELTPANTLKFYY+AIDRALEEIKERHPGQG+HV+GHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNT PPEDAGLWAAVDQTRGLLK INARFPGAHVEGVRYTSVAGTALEG    PGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELP+SKHSGF+PFPGDAIDLGEDFLWYGSSSLMD WV NLDAAE+
Sbjct:  105 ELKKRGFPAYCADLTRFGWITGLLPSALSPEYVKGELTPANTLKFYYEAIDRALEEIKERHPGQGMHVIGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTGPPEDAGLWAAVDQTRGLLKYINARFPGAHVEGVRYTSVAGTALEG--KLPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPSSKHSGFIPFPGDAIDLGEDFLWYGSSSLMDSWVGNLDAAEQ 343          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZI81_9STRA)

HSP 1 Score: 255 bits (651), Expect = 1.090e-81
Identity = 137/238 (57.56%), Postives = 161/238 (67.65%), Query Frame = 1
Query:   16 RGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEGT-RNFPG-SVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNLDAAE 723
            RG   Y A L R GWI GLLPSA + +YFKG L P+ TLKFYYDAID+ LE +K +HP +  H+VGHSIGGWVAR WL+E  + ADR  VLSLTTLGTPN  PP D+ L A VDQTRGLLK IN  FP   V GV+YTSV GT   GT   FP   V+EMLA +SYLPL G     GDGI+P    +++GS  + LP +KHSGFVP  G AI L  D  WYG ++ ++ W   LDAAE
Sbjct:   35 RGHQVYGAQLQRVGWILGLLPSALTLDYFKGTLQPSKTLKFYYDAIDKGLESLKAQHPDEPFHLVGHSIGGWVARGWLSERASAADRARVLSLTTLGTPNREPPPDSPL-AKVDQTRGLLKFINENFPAGSVPGVKYTSVVGT---GTLARFPSLDVQEMLAAISYLPLGGAPDGLGDGIVPWRAGIMDGSESIILPDAKHSGFVPTAGRAIPL--DVEWYGDAATVERWGVVLDAAE 266          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YIH2_HETAK)

HSP 1 Score: 241 bits (614), Expect = 2.470e-75
Identity = 109/228 (47.81%), Postives = 158/228 (69.30%), Query Frame = 1
Query:   19 GFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEGTRNFPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWV 702
            G  AY AD+ R  W+  ++P+ F+ +Y+ G L P N L+F+++ ID+ +E +K+ +PG+ V+++GHSIGGW+ R++L E C  A+RE   SLT LG+P   PPE   +WAA DQTRGLL+ +NA FPGA   G+RYT+VAG   EG+    G ++  +AY SYLPLCGDG  RGDGI+P++ A+LEG+  + L   KH+G+VP PG ++ L E +LWYGS  +++ W 
Sbjct:  123 GHKAYVADIGRSDWLK-IVPATFTIDYWTGNLKPKNCLQFFFEGIDKTMERVKKENPGEQVNIIGHSIGGWIVRSYLGEVCTSAEREAFCSLTLLGSPQQTPPEGT-VWAAADQTRGLLRHVNANFPGAFHPGLRYTAVAGAGQEGS--LAGGLQAAVAYSSYLPLCGDGNCRGDGIVPVETALLEGAEALVLEGVKHAGWVPTPGTSLKLPESYLWYGSPGVVERWA 346          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: AB (hydrolase-1 domain-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL2_9STRA)

HSP 1 Score: 234 bits (598), Expect = 2.530e-73
Identity = 116/241 (48.13%), Postives = 162/241 (67.22%), Query Frame = 1
Query:   16 RGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENV----LSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEGTRNFPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNLDAAEK 726
            RG PAY  DL+RF W+  +  SA + +Y++G L P+ TL FY+DA    +E +K  +P + +H+V HSIGGWVARA+  E    AD E+V    +SLTTLG+PN  PP   G+W ++DQTRGLL+ +N RFPGA  +G++Y SV G   +G   F G +EE +AY+SYLPLCG G + GDGIIP  VA LEGST V +  +KHSGF+P  G +I +   ++WYG+  ++D W+ +L  ++K
Sbjct:   76 RGHPAYAVDLSRFDWLK-ITKSAITQDYWRGTLKPSGTLDFYFDAAAAIIERVKFEYPDRKIHLVAHSIGGWVARAYCGE---VADPEDVNKRFISLTTLGSPNYPPPAGEGIWGSIDQTRGLLEYVNLRFPGAFHKGMKYVSVGGVGTKG--RFGGGLEESIAYISYLPLCGKGDAEGDGIIPESVAFLEGSTHVRVMEAKHSGFIPTAGPSIKI-PGYVWYGTPEIVDQWLVHLPESKK 309          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UYV4_9STRA)

HSP 1 Score: 233 bits (594), Expect = 1.180e-72
Identity = 109/238 (45.80%), Postives = 161/238 (67.65%), Query Frame = 1
Query:    1 RDMLVRGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEGTRNFPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNLD 714
            +D+  RG  AY A+L+R  W+  ++P+  + +Y++G L P   L F+++ +++AL +++E +PG  +H VGHSIGGW+ARA+L E C +A      SLTTLGTP+  PP D+ + A+ +QTRGLL  +N  FPGA+   ++YT V G+A +G      +VEE+LAY SYLPLCG G + GDGI+PL  A L+ +  + +P +KHSGF+P PG++I L E+F WYGS  L+  W + LD
Sbjct:   88 QDLERRGHRAYVAELSRADWLR-IVPATLTADYWRGTLKPKECLGFFFEGVEKALRKVQEENPGSQIHAVGHSIGGWIARAYLGEVCDEATCNQFCSLTTLGTPHQGPPADSPM-ASFEQTRGLLSYVNTNFPGAYHGHMKYTCVCGSAQQGA--IGANVEEVLAYASYLPLCGKGEAHGDGIVPLQAAFLDDAERIIIPEAKHSGFLPTPGNSISLPENFKWYGSEDLISKWAEKLD 321          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: GPI (inositol-deacylase n=1 Tax=Chromera velia CCMP2878 TaxID=1169474 RepID=A0A0G4HP68_9ALVE)

HSP 1 Score: 229 bits (585), Expect = 3.230e-71
Identity = 115/239 (48.12%), Postives = 155/239 (64.85%), Query Frame = 1
Query:    1 RDMLVRGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEGTRNFPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTV-VELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNLD 714
            +++  RGFPAY ADL R  W   L+P +F+ +Y+KG L P+  L+FYY AI R ++ + E+HP Q +H+VGHSIGGWVAR +LAE   +  ++ + SLTTLG+PN A PEDA L  A+DQTRGLL  +N+++PGA  EGVRY S  G+ + G    P   E  LA++SY  LCG GG  GDGI+P  VA LEG    ++L   KH+GF+P+ G          WYG+  ++D W D LD
Sbjct:   92 QELNARGFPAYVADLGRSDWFE-LIPHSFTADYWKGTLQPSKVLRFYYRAIQRTVDLVAEQHPNQQIHLVGHSIGGWVARLFLAEEADEDTQKRIRSLTTLGSPNKALPEDAPL--AIDQTRGLLSYVNSKYPGATCEGVRYFSAGGSRVRGQVEVPPDFESALAFLSYFALCGKGGEAGDGIVPYSVAELEGGERHLDLGDVKHTGFLPWFGPGTIQIPGLRWYGTPEVVDLWSDVLD 327          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: AB (hydrolase-1 domain-containing protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4FAT1_VITBC)

HSP 1 Score: 213 bits (541), Expect = 4.110e-65
Identity = 108/239 (45.19%), Postives = 158/239 (66.11%), Query Frame = 1
Query:    4 DMLVRGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENVL-SLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGA-HVEGVRYTSVAGTALEGTRNFPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNLD 714
            ++  RG+PAY  DL R  W+  L+PS+ +  Y++G+L P+  L+FYY A+ R++  ++E HP Q +H+VGHSIGGW+ RA+LAE   D +R ++  SLTTLGTP+  PP D+  +A  DQTRGLL  I   +PGA H + + Y SV G +++G     G +E +LAY SYL LCG+G + GDG++P   A+L GS+ + L   KHSGFVP  G +I +   F WYG+  ++D W++ L+
Sbjct:   46 ELNARGYPAYAVDLKRLDWLE-LIPSSLTLAYWQGKLEPSKVLQFYYRALRRSVTSVREAHPEQRMHLVGHSIGGWIVRAFLAEEYDDDERASLFTSLTTLGTPHNPPPADSP-FAQFDQTRGLLTYIADNYPGAFHSDHINYNSVVGASVKGGLG-EGGLEGLLAYASYLALCGEGDTTGDGVVPQSTALLPGSSTMVLEDVKHSGFVPSLGPSIKI-PGFRWYGTPDVVDQWIELLE 280          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: GPI (inositol-deacylase n=1 Tax=Hemiselmis andersenii TaxID=464988 RepID=A0A7S1H8C2_HEMAN)

HSP 1 Score: 184 bits (466), Expect = 7.250e-53
Identity = 106/251 (42.23%), Postives = 151/251 (60.16%), Query Frame = 1
Query:   16 RGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIKERHPGQG-VHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAH---VEGVRYTSVAGTALE----------GTRNFPGSV------EEMLAYVSYLPLCGDG-GSRGDGIIPLDVAVLEG-STVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWV 702
            RGF  Y A L+RF W+  ++P+  + E+   +L PA TL F+Y+AID+ALEE+ + H  +  V  +GHSIGGWVAR+++ E   +   + V SL TLGTPN  PP+D+ + A++DQTRGLL  IN +FPG        V   + +GTA+           G + +   V      EE++A  SYLPL G   G +GDG+IP+D A++ G S  V L    H+GFVP PG ++ L + +LWYGS  L+D W+
Sbjct:  117 RGFEVYPAPLSRFDWLK-IVPATLTKEFLTAQLKPATTLGFFYEAIDKALEEVDKVHGSEAQVVFLGHSIGGWVARSYIGEQLGEEGAKRVRSLVTLGTPNNPPPQDS-IVASLDQTRGLLTYINDKFPGGSPLPASSVGCVAGSGTAVPEKLGDVFGNAGDKLWDAEVGRSKLLEEVVALSSYLPLSGSALGVKGDGLIPVDTALMGGESRSVVLEDCNHAGFVPTPGPSLMLPKTYLWYGSEQLIDEWL 365          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: GPI (inositol-deacylase n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4PV97_9DINO)

HSP 1 Score: 186 bits (472), Expect = 5.280e-52
Identity = 110/255 (43.14%), Postives = 149/255 (58.43%), Query Frame = 1
Query:    4 DMLVRGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEIK----ERHPGQGVHVVGHSIGGWVARAWLAEGCAD-ADRENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFPGA-HV-EGVRYTSVAGTALEGTRNFP----------GSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTSK-----HSGFVPFPGDAIDLGEDFLWYGSSSLMDFWV 702
            ++  RG P + A L +  W   L+PS  S EY+ GEL P   L+FYY A++ A+ + +    +R  G  +H+V HSIGGW+ARA++ E  A   +  +V SL TLGTP+  PP+ + +  A DQTRGLLK IN+ FPGA H  EGVRY SV G A++G    P          G +E  LA+ SYL LCGDGG+RGDGI PL  A+L G  V  +         H+ ++P PG +I L     WYGS + +D W+
Sbjct:  304 ELRSRGHPVFLAPLDKLNWFE-LVPSFLSKEYWTGELRPGKVLQFYYRALEAAVADARSYLAKRGTGGQIHIVAHSIGGWIARAFMGEVLAPRGELVDVASLVTLGTPHAEPPKGSWMETA-DQTRGLLKYINSEFPGAFHAGEGVRYISVGGGAVQGGLPLPFGLGGEGAEGGPIERALAWASYLALCGDGGARGDGITPLACALLPGDGVQRVTLRGGADCFHADYLPSPGPSIPL-RGAPWYGSGAALDQWL 555          
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Match: GPI (inositol-deacylase n=1 Tax=Hanusia phi TaxID=3032 RepID=A0A7S0HT67_9CRYP)

HSP 1 Score: 176 bits (445), Expect = 5.790e-50
Identity = 104/254 (40.94%), Postives = 144/254 (56.69%), Query Frame = 1
Query:   16 RGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAIDRALEEI-KERHPGQGVHVVGHSIGGWVARAWLAEGCADAD-RENVLSLTTLGTPNTAPPEDAGLWAAVDQTRGLLKDINARFP-GAHVEGVRYTSVAGTAL------------------EGTRNFPGSVEEMLAYVSYLPLCGDG-GSRGDGIIPLDVAVLEGSTVVELPTSKHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNL 711
            RGF  Y A L RF W+  ++PS  + E+F   L P+ TL F+Y A+DRA E++ K+  P   V V+GHSIGGWVAR+++AE   +   R  V SL TLGTP+  PP+D+ + +AVDQTRGLL  IN  FP G  ++    T VAG                     + T+     +EE++A  SY PL G    + GDG+IP+D+AVL     V +    H+ FVP PG ++ L E + WYG+ S +D W+  L
Sbjct:   96 RGFNLYPAPLARFDWLK-IVPSTLTKEFFTASLRPSKTLGFFYSALDRAFEQVDKDYGPDVEVSVLGHSIGGWVARSYIAEVLGEEKARRRVRSLVTLGTPHNPPPKDS-IVSAVDQTRGLLTYINENFPNGFPLDASAVTCVAGKGTVTPKAPMDVITNFGEKLWDETQRRSKLLEEIVALASYFPLSGKAFETEGDGLIPVDIAVLAECRSVIIDNCNHAAFVPTPGKSLRLPETYEWYGTESAVDQWIQYL 347          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7318.15508.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
AB1.310e-16191.70hydrolase-1 domain-containing protein n=2 Tax=Ecto... [more]
Uncharacterized1.090e-8157.56protein n=1 Tax=Tribonema minus TaxID=303371 RepID... [more]
Hypothetical2.470e-7547.81protein (Fragment) n=1 Tax=Heterosigma akashiwo Ta... [more]
AB2.530e-7348.13hydrolase-1 domain-containing protein n=1 Tax=Nann... [more]
Hypothetical1.180e-7245.80protein n=1 Tax=Fibrocapsa japonica TaxID=94617 Re... [more]
GPI3.230e-7148.12inositol-deacylase n=1 Tax=Chromera velia CCMP2878... [more]
AB4.110e-6545.19hydrolase-1 domain-containing protein n=1 Tax=Vitr... [more]
GPI7.250e-5342.23inositol-deacylase n=1 Tax=Hemiselmis andersenii T... [more]
GPI5.280e-5243.14inositol-deacylase n=1 Tax=Alexandrium monilatum T... [more]
GPI5.790e-5040.94inositol-deacylase n=1 Tax=Hanusia phi TaxID=3032 ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7318contigE_fasciculatus_S2_contig7318:705..2618 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score463.8
Seed ortholog evalue5e-128
Seed eggNOG ortholog2880.D8LRD2
Model size726
Hectar predicted targeting categoryother localisation
Exons4
EggNOG free text desc.palmitoyl-(protein) hydrolase activity
EggNOG OGs2S15P@2759,COG1075@1
Ec32 ortholog descriptionAlpha/Beta hydrolase fold
Ec32 orthologEc-06_002970.1
Cds size720
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842395.9875154-UTR-E_fasciculatus_S2_contig7318:704..7101696842395.9875154-UTR-E_fasciculatus_S2_contig7318:704..710Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7318 705..710 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842396.0006323-CDS-E_fasciculatus_S2_contig7318:710..8391696842396.0006323-CDS-E_fasciculatus_S2_contig7318:710..839Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7318 711..839 +
1696842396.0119085-CDS-E_fasciculatus_S2_contig7318:1297..16271696842396.0119085-CDS-E_fasciculatus_S2_contig7318:1297..1627Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7318 1298..1627 +
1696842396.025848-CDS-E_fasciculatus_S2_contig7318:1968..21191696842396.025848-CDS-E_fasciculatus_S2_contig7318:1968..2119Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7318 1969..2119 +
1696842396.0398638-CDS-E_fasciculatus_S2_contig7318:2508..26181696842396.0398638-CDS-E_fasciculatus_S2_contig7318:2508..2618Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7318 2509..2618 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7318.15508.1prot_E_fasciculatus_S2_contig7318.15508.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7318 711..2618 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7318.15508.1

>prot_E_fasciculatus_S2_contig7318.15508.1 ID=prot_E_fasciculatus_S2_contig7318.15508.1|Name=mRNA_E_fasciculatus_S2_contig7318.15508.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=240bp
MLVRGFPAYCADLTRFGWITGLLPSAFSPEYFKGELTPANTLKFYYDAID
RALEEIKERHPGQGVHVVGHSIGGWVARAWLAEGCADADRENVLSLTTLG
TPNTAPPEDAGLWAAVDQTRGLLKDINARFPGAHVEGVRYTSVAGTALEG
TRNFPGSVEEMLAYVSYLPLCGDGGSRGDGIIPLDVAVLEGSTVVELPTS
KHSGFVPFPGDAIDLGEDFLWYGSSSLMDFWVDNLDAAEK
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mRNA from alignment at E_fasciculatus_S2_contig7318:705..2618+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7318.15508.1 ID=mRNA_E_fasciculatus_S2_contig7318.15508.1|Name=mRNA_E_fasciculatus_S2_contig7318.15508.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1914bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7318:705..2618+ (Ectocarpus fasciculatus EfasUO2)
CGCGATATGTTGGTCAGGGGCTTCCCCGCGTATTGCGCAGACCTGACGAG GTTTGGGTGGATCACGGGGCTCCTTCCCTCGGCATTTTCGCCGGAGTACT TCAAGGGCGAGCTCACTCCGGCCAACACCCTGAAGGTGGGCTGTTGATGG ATCGCCCGTGCGTGTGAATGCGGATCAGGCTGCGGCGAGATGGCTTCTTC TTTGTCCGTCCCGCGGCTACAAGTGCAGCAACGTATTCACACACAAACAC ACACATATAAAGCGTCCACACCTAACCGGCCGACAGGCCTTACACATGCG TGTCCTCACAACCTCGGGCATGAAGCAGGACCAGGAACAGAATAAGACAT GGATCGATCGGCACATGCGTTTAGAACCACTTTGTTTTCGCCTCACAACC CCTTCGTGGGACAACACAAAGGGACCCTTTCCTTCCCCGCGTCGCCCAAC AGAACCTCGTCGCCCACGAGCATGTACCTGTTGGGCAAAGTGCCCCTGGT GCTTTGTAGAGATGCGAAGGTTCACGGCGTGAAGACTAACGGTTGGTGTG ATGAATTACTTGTTACTCCACTCCGCGCGCGATTTCTGTGCAGTTTTACT ACGACGCAATAGATCGGGCGCTGGAAGAGATAAAAGAGAGACATCCCGGG CAGGGGGTTCATGTCGTCGGGCATAGCATAGGTGGCTGGGTTGCACGCGC TTGGCTCGCGGAGGGATGTGCGGACGCAGACCGAGAAAATGTGCTCAGCC TCACGACGCTAGGGACTCCAAACACGGCCCCCCCGGAAGATGCCGGGCTA TGGGCCGCCGTGGACCAAACACGGGGGCTCTTGAAGGACATCAACGCTAG ATTCCCGGGGGCGCACGTGGAAGGCGTACGGTACACGAGCGTCGCGGGGA CTGCGCTGGAAGGTACAAGAAACGTACAAGATGTTGGTGGATATATATGG GTGTGTGTCGTCTCGTGTTGGGTCCGCTTTTGGCACACGTGGACAGGCGT GGGCTTGCAATTCCATTGCAGCACGGTTGGAAAAGGGAGGATGACTAGGT TTTTCGGGAGGGTTGGGCGTGCGCATCAGCATGTCTCGCGCGTTTGCTTA TCGAGGTGAACGAAACTTTCGTGTTGTCTCCAACGCTTACCCCCCTGCTG GTTTTGCTGCTAGGAGCGCCATTGCACGCTTCTTCTCGTCGTTCGAACGT GTCTTACCAAAAGCGTTCCGCCCGGTTAAATTGATCTGCCGTCCGAACCT TGCATCCAGGAAAGTTCCCGGGGAGCGTGGAGGAAATGCTTGCGTACGTC AGCTACCTTCCTCTCTGCGGGGACGGCGGGTCTCGCGGTGACGGCATCAT CCCGCTCGACGTGGCTGTATTGGAGGGCTCCACGGTTGTCGAATTGCCAA CTTCCAAACATTCAGGTGAGTTACCCCAGAGCACTAAACCCGCGACCGGC GAATTGGGAACGCACCACAGCGCGGGGTCGGGCGGTGGGTCGCAGAAAAG ACGACTTTGTTTCTCTCGCTTTACCTGTGGTGGGGCCTTCTTGGTCCTGG GTCTCGCTGACGGTGCAGCCAAAGCAATCCTCGGTGTTTGTTTGCTACAA CAACGTGCGAGGATCTCGATTCGACCCCGAACGTGCGGGGTACCGATAAC ACGCTGTTGATACCTGGATGTGTGGTTTCAAGCCCATTGCAATATTGGAA AGAACTGCTCGAACACGTTTCTTGTGAAAGCATTTGAAAATATTGTCTTG CAACAATCGTTAATTTACGATCGATCGCCCGCTCCTGTTGCCGGAAATAA ACAGGCTTTGTTCCCTTCCCTGGAGACGCGATCGACCTTGGCGAGGATTT CCTGTGGTATGGTAGCAGCAGTTTAATGGATTTTTGGGTGGACAACCTTG ATGCGGCGGAGAAA
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7318:705..2618+

>mRNA_E_fasciculatus_S2_contig7318.15508.1 ID=mRNA_E_fasciculatus_S2_contig7318.15508.1|Name=mRNA_E_fasciculatus_S2_contig7318.15508.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=720bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7318:705..2618+ (Ectocarpus fasciculatus EfasUO2)
ATGTTGGTCAGGGGCTTCCCCGCGTATTGCGCAGACCTGACGAGGTTTGG
GTGGATCACGGGGCTCCTTCCCTCGGCATTTTCGCCGGAGTACTTCAAGG
GCGAGCTCACTCCGGCCAACACCCTGAAGTTTTACTACGACGCAATAGAT
CGGGCGCTGGAAGAGATAAAAGAGAGACATCCCGGGCAGGGGGTTCATGT
CGTCGGGCATAGCATAGGTGGCTGGGTTGCACGCGCTTGGCTCGCGGAGG
GATGTGCGGACGCAGACCGAGAAAATGTGCTCAGCCTCACGACGCTAGGG
ACTCCAAACACGGCCCCCCCGGAAGATGCCGGGCTATGGGCCGCCGTGGA
CCAAACACGGGGGCTCTTGAAGGACATCAACGCTAGATTCCCGGGGGCGC
ACGTGGAAGGCGTACGGTACACGAGCGTCGCGGGGACTGCGCTGGAAGGT
ACAAGAAACTTCCCGGGGAGCGTGGAGGAAATGCTTGCGTACGTCAGCTA
CCTTCCTCTCTGCGGGGACGGCGGGTCTCGCGGTGACGGCATCATCCCGC
TCGACGTGGCTGTATTGGAGGGCTCCACGGTTGTCGAATTGCCAACTTCC
AAACATTCAGGCTTTGTTCCCTTCCCTGGAGACGCGATCGACCTTGGCGA
GGATTTCCTGTGGTATGGTAGCAGCAGTTTAATGGATTTTTGGGTGGACA
ACCTTGATGCGGCGGAGAAA
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