|
|
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7312.15505.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FTI0_ECTSI) HSP 1 Score: 911 bits (2355), Expect = 6.540e-316 Identity = 631/942 (66.99%), Postives = 656/942 (69.64%), Query Frame = 1
Query: 1 MDVVDENQGSHGIIGSPVRRKVSAASRAASSASPLAERARDSQGVVIVMESQRQAAGGGEAVSGRSSTGSNGASKRARLTGKEAHGSRRETASNLELAGVLEALGSPSTGEVAMGEAAAGGETVAASAKNAKRRHKRRMTADILDINNIFDDSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTGQAASPASAGGLSSTGFDSMDFSTPRSSGSRLSSLEGGXXXXQMMAGAEEADGGDETADFSAIFKLVAQGSTPAGKKG-TPTGGGSQA---GAGGGSTPRPPAGRPRARHHSNQKPGRDSLAQGLVEPASLPPGALERAGSGGGGVKEVAPAANNPAAPTERVRRPRHSIWRATPPHDCEGLAVPTPDPRHHDSLRPSHQSTFNSPDPDSSAASGITGTPASGSGETGDVGNLLADLSANSMISSASGGELGGDDGQYTAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXASGXGGTGGKKKRR--------NTAEKLTVDSLLGSLDSP-AQSSSGTRSAETSRDLAEGGGATPEGATEPSSVDATSEQPAVLLPKAGKKSSRRDTVDPSDFQDLLQDPDMITPTSSPAATXXXXXXXXXXGDXXXXLAXXXPGKQGXXXATTPGSNRSGATAVSMRGVFEPISPSLGGSAEKEEEGLPVGAGVVVTPRFDRPVSGSGGGRRKDSGGTAGNGSVCGLLDSTPSPGGGGLDQSFGGAEGMGKLPPMTGRAGAIAAILDSGTRGRNSSSAKAAKNGRRNTCEPEEFGDVIADLDSEPDTPASSKDDSRLGEDAAVSPLQEKEGRLETLSTPSSSSSHDSPLEVSEPAAQQAEQEAGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRRTTASPTTLGALLEDLGAQGEDETDELGTVNSVNSIEVVKASPPQENESGPSDNG 2787
MDVVDENQGSHGIIGSPVRRKVSAAS AASSASPLAERARD+QGVV MESQRQAAGG +AVSGRSSTGSN ASKRAR TGKE HGSRRETASNLELAGVLEALGSPSTGEV M EAA GGE VAA AK ++ RHKRRMTADILDINNIFDDSM XXXXXXXXXXXXXXXXXX +G QAASPA G L+S+ +D +D+ + RSSGSR SSLEGG QMMAGAEEADGGDETADFSAIFKLVAQG+TPAGK TP G GSQA G G STP PPAG PRARHHSNQKPGRDSLAQGLVEPASLPPGAL R GSG GGVKEVAPAANNPAAPTERVRRP+HSI R TPP + E +AVPTP PRH DSLRPSHQ TF+SP+ DS AA VG LLADLSANSMISSA GG DDGQYTAM A G NTAEKLTVDSLLGSLDSP QSS GTR A T RD AEGGGATP GA EPS V ATSEQPAVLLPKA D V GD LA PG+QG A TPGS RSGATAVSMRGVFEPISPSLGGSA+ E G+PVG G VVTPRFDR VSGS GG RKDSGGTAGNGSVCGLLDSTPSPGGG LDQSFG EG GKLPPMTGRAGAIAAILDSGTRGR SS AKA KNGRRNTCEPEEFGDVIADLDSEPDTPASS+D SR+GEDAA SP QEK +ETLSTPSSSSS DS E XXX DRR+TASPTTLGALLEDLGAQGEDETDE GTVNS E VKASPPQENESGPSD+G
Sbjct: 1 MDVVDENQGSHGIIGSPVRRKVSAASHAASSASPLAERARDAQGVV--MESQRQAAGGKKAVSGRSSTGSNSASKRARRTGKEPHGSRRETASNLELAGVLEALGSPSTGEVVMEEAAVGGEAVAACAKKSRMRHKRRMTADILDINNIFDDSMSSDGXXXXXXXXXXXXXXXXXXR--------TGPAQAASPA-GGSLTSSVYDGLDYVSSRSSGSRRSSLEGGGGADQMMAGAEEADGGDETADFSAIFKLVAQGTTPAGKNTRTPPGEGSQAVGAGVGSSSTP-PPAGPPRARHHSNQKPGRDSLAQGLVEPASLPPGALGRVGSGAGGVKEVAPAANNPAAPTERVRRPKHSISRETPPDNWEHMAVPTPGPRHRDSLRPSHQPTFHSPNADS-AAXXXXXXXXXXXXXXXXVGKLLADLSANSMISSAGGGSDEEDDGQYTAMNVDAVMAELESDGMGGRGEVRGCDDHPTAVDMDARVAELADGXXXXXXXXXXXXXNTAEKLTVDSLLGSLDSPPVQSSGGTRLAGTPRDSAEGGGATPLGAAEPSGVAATSEQPAVLLPKAAA-----DAV--------------------------------ALGDGSSSLASSSPGEQGAAAAATPGSGRSGATAVSMRGVFEPISPSLGGSADGE--GVPVGGGCVVTPRFDRRVSGSVGGGRKDSGGTAGNGSVCGLLDSTPSPGGG-LDQSFGEGEGRGKLPPMTGRAGAIAAILDSGTRGRRSS-AKAGKNGRRNTCEPEEFGDVIADLDSEPDTPASSRDHSRVGEDAA-SP-QEKGEPVETLSTPSSSSSLDSSPEXXXXXXXXXXXXXXXXXXXGGPEESMDVDTDEDSFDSPGGGSEDENKPKERDDRRSTASPTTLGALLEDLGAQGEDETDEHGTVNST---EGVKASPPQENESGPSDDG 883
BLAST of mRNA_E_fasciculatus_S2_contig7312.15505.1 vs.
Match: Uncharacterized (protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYX0_9PHAE) HSP 1 Score: 931 bits (2406), Expect = 4.890e-312 Identity = 632/900 (70.22%), Postives = 666/900 (74.00%), Query Frame = 1
Query: 136 VIVMESQRQAAGGGEAVSGRSSTGSNGASKRARLTGKEAHGSRRETASNLELAGVLEALGSPSTGEVAMGEAAAGGETVAASAKNAKRRHKRRMTADILDINNIFDDSMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSGTGQAASPASAGGLSSTGFDSMDFSTPRSSGSRLSSLEGGXXXXQMMAGAEEADGGDETADFSAIFKLVAQGSTPAGKKGTPTGGGSQAGAGGGSTPRPP-AGRPRARHHSNQKPGRDSLAQGLVEPASLPPGALERAGSGGGGVKEVAPAANNPAAPTERVRRPRHSIWRATPPHDCEGLAVPTPDPRHHDSLRPSHQSTFNSPDPDSSAASGITGTPASGSGETGDVGNLLADLSANSMISSASG------GELGGDDGQYTAMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX-------ASGXG-GTGGKKKRRNTAEKLTVDSLLGSLDSPAQSSSG-TRSAETSRDLAEGGGATPEGATEPSSVDATSEQPAVLLPKAGKKSSRRDTVDPSDFQDLLQDPDMITPTSSPAATXXXXXXXXXXGDXXXXLAXXXPGKQGXXXATTPGSNRSGATAVSMRGVFEPISPSLGGSAEKEEEGLPVGAGVVVTPRFDRPVSGSGGGRRKDSGGTAGNGSVCGLLDSTPSPGGGGLDQSFGGAEGMGKLPPMTGRAGAIAAILDSGTRGRNSSSAKAAKNGRRNTCEPEEFGDVIADLDSEPDTPASSKDDSRLGEDAAVSPLQEKEGRLETLSTPSSSSSHDSPLEVSEPAAQQAEQEAGAKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXDRRTTASPTTLGALLEDLGAQGEDETDELGTVNSVNSIEVVKASPPQENESGPSDNG 2787
V ES R AAGG +AVS RSSTGSN ASKRAR TGKE +GSRRETASNLELAGVLEALGSPSTGEV M EAA G E VA SAK +K RHKRRMTADILDINNIFDDSM XXXXXXXXXXXXXXXXXXXXXX +G QAASPA G LSS+ +D +DF + RSSGS SSLEG QMMAGAEEADGGDETADFSAIFKLVA G+ PAGKK TPTG G P ARHHSNQKPGRDSLAQGLVEPASLPPGAL R GSG GGVKEVAP ANNPAAPTER+RRP+ SI +ATPP + E LAVPTP PRHHDSLR SHQ TF+SP+ DS+A+ I T SGSGETGDVGNLLADLSANSMISSA G G+ GD GQYTAM XXXXXX SG G GTG KKKRRNTAEKLTVDSLLGSLDSP SSG RSAET RD AEGGGATPEGA EPS VD TS+Q AVLLPKAGK+SSRRDTVDPSDFQDLL+D DM+TPTSSPAA GD LA PG+QG TPGS RSGATAVSMRGVFEPI P+LGGSAE+E GLPVG G V+TPRFDR VSG GGG RKDSGGTAGNGSVCGLLDSTPSPGGG DQSFG EG GKLPPMTGRAGAIAAILDSGTRG SSAKAAKNGRR TCEPEEFGDVIA LDSEPDTPASS+DDSR+GEDAA SP QEKEG +ETLSTPSSS+SHDS E S PAAQQ+ Q+AGA XXX DRR+TASPTTLGALLEDLGAQGEDETDE GTVNS EVVKASPPQENESGPSD+G
Sbjct: 35 VYSCESAR-AAGGIKAVSCRSSTGSNSASKRARRTGKEPNGSRRETASNLELAGVLEALGSPSTGEVVMEEAAVGREAVADSAKKSKMRHKRRMTADILDINNIFDDSMSSDGPAXXXXXXXXXXXXXXXXXXXXXXA--TGPAQAASPA-RGSLSSSVYDGLDFVSSRSSGSTRSSLEGSGGADQMMAGAEEADGGDETADFSAIFKLVAHGTRPAGKKRTPTGXXXXXXXXXXXXXXXXXVGPPWARHHSNQKPGRDSLAQGLVEPASLPPGALGRVGSGAGGVKEVAPPANNPAAPTERLRRPKDSISKATPPDNSENLAVPTPRPRHHDSLRLSHQPTFHSPNADSAASRNID-TLGSGSGETGDVGNLLADLSANSMISSAGGEVELDQGDAEGDHGQYTAMNVDAVMAELESDGLGGRGGVKGRDDRPXXXXXXXXXXXXAGSGGGVGTGRKKKRRNTAEKLTVDSLLGSLDSPPVQSSGRARSAETCRDSAEGGGATPEGAGEPSGVDPTSKQLAVLLPKAGKRSSRRDTVDPSDFQDLLRDTDMVTPTSSPAAITAAAADAVALGDGSSALAATSPGEQGAAAXXTPGSGRSGATAVSMRGVFEPIDPALGGSAERE--GLPVGGGGVITPRFDRRVSGFGGGGRKDSGGTAGNGSVCGLLDSTPSPGGG-FDQSFGEGEGRGKLPPMTGRAGAIAAILDSGTRG-GRSSAKAAKNGRRYTCEPEEFGDVIAGLDSEPDTPASSRDDSRVGEDAA-SP-QEKEGSVETLSTPSSSASHDSCPEASGPAAQQSGQDAGANXXXGGPEESMDVDTDEDSFDSPGGGSEDENKPKEREDRRSTASPTTLGALLEDLGAQGEDETDEHGTVNST---EVVKASPPQENESGPSDDG 920
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Stop | 1 |
| Start | 1 |
| Model size | 2817 |
| Hectar predicted targeting category | other localisation |
| Exons | 8 |
| Ec32 ortholog description | hypothetical protein |
| Ec32 ortholog | Ec-21_001450.1 |
| Cds size | 2817 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1696842395.7074506-CDS-E_fasciculatus_S2_contig7312:383..515 | 1696842395.7074506-CDS-E_fasciculatus_S2_contig7312:383..515 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 384..515 - |
| 1696842395.718164-CDS-E_fasciculatus_S2_contig7312:1162..1406 | 1696842395.718164-CDS-E_fasciculatus_S2_contig7312:1162..1406 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 1163..1406 - |
| 1696842395.7331743-CDS-E_fasciculatus_S2_contig7312:2016..2195 | 1696842395.7331743-CDS-E_fasciculatus_S2_contig7312:2016..2195 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 2017..2195 - |
| 1696842395.7523317-CDS-E_fasciculatus_S2_contig7312:2602..3745 | 1696842395.7523317-CDS-E_fasciculatus_S2_contig7312:2602..3745 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 2603..3745 - |
| 1696842395.7616699-CDS-E_fasciculatus_S2_contig7312:4453..5306 | 1696842395.7616699-CDS-E_fasciculatus_S2_contig7312:4453..5306 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 4454..5306 - |
| 1696842395.7709928-CDS-E_fasciculatus_S2_contig7312:5933..6037 | 1696842395.7709928-CDS-E_fasciculatus_S2_contig7312:5933..6037 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 5934..6037 - |
| 1696842395.7819812-CDS-E_fasciculatus_S2_contig7312:6840..6951 | 1696842395.7819812-CDS-E_fasciculatus_S2_contig7312:6840..6951 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 6841..6951 - |
| 1696842395.7938163-CDS-E_fasciculatus_S2_contig7312:7409..7460 | 1696842395.7938163-CDS-E_fasciculatus_S2_contig7312:7409..7460 | Ectocarpus fasciculatus EfasUO2 | CDS | E_fasciculatus_S2_contig7312 7410..7460 - |
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7312.15505.1 >prot_E_fasciculatus_S2_contig7312.15505.1 ID=prot_E_fasciculatus_S2_contig7312.15505.1|Name=mRNA_E_fasciculatus_S2_contig7312.15505.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=939bp
MDVVDENQGSHGIIGSPVRRKVSAASRAASSASPLAERARDSQGVVIVME
SQRQAAGGGEAVSGRSSTGSNGASKRARLTGKEAHGSRRETASNLELAGV
LEALGSPSTGEVAMGEAAAGGETVAASAKNAKRRHKRRMTADILDINNIF
DDSMSSDGPPAAAAAAAAAAAAAADMASPPPPPPPSGTGQAASPASAGGL
SSTGFDSMDFSTPRSSGSRLSSLEGGGGGDQMMAGAEEADGGDETADFSA
IFKLVAQGSTPAGKKGTPTGGGSQAGAGGGSTPRPPAGRPRARHHSNQKP
GRDSLAQGLVEPASLPPGALERAGSGGGGVKEVAPAANNPAAPTERVRRP
RHSIWRATPPHDCEGLAVPTPDPRHHDSLRPSHQSTFNSPDPDSSAASGI
TGTPASGSGETGDVGNLLADLSANSMISSASGGELGGDDGQYTAMNVDAV
MAELESDGLGGRDDRPTAVDMEARVAELASGGGGTGGKKKRRNTAEKLTV
DSLLGSLDSPAQSSSGTRSAETSRDLAEGGGATPEGATEPSSVDATSEQP
AVLLPKAGKKSSRRDTVDPSDFQDLLQDPDMITPTSSPAATAAAAAGAMA
LGDDSSSLATSSPGKQGAAAATTPGSNRSGATAVSMRGVFEPISPSLGGS
AEKEEEGLPVGAGVVVTPRFDRPVSGSGGGRRKDSGGTAGNGSVCGLLDS
TPSPGGGGLDQSFGGAEGMGKLPPMTGRAGAIAAILDSGTRGRNSSSAKA
AKNGRRNTCEPEEFGDVIADLDSEPDTPASSKDDSRLGEDAAVSPLQEKE
GRLETLSTPSSSSSHDSPLEVSEPAAQQAEQEAGAKAGAAGPGESMDVDT
DEDSFDSPGGGSEDEPKPKDKDDRRTTASPTTLGALLEDLGAQGEDETDE
LGTVNSVNSIEVVKASPPQENESGPSDNGGSCEGALKD* back to topmRNA from alignment at E_fasciculatus_S2_contig7312:384..7460- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_E_fasciculatus_S2_contig7312.15505.1 ID=mRNA_E_fasciculatus_S2_contig7312.15505.1|Name=mRNA_E_fasciculatus_S2_contig7312.15505.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=7077bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7312:384..7460- (Ectocarpus fasciculatus EfasUO2)
ATGGATGTCGTGGACGAGAACCAGGGCTCACATGGAATAATTGGGTCGCC
GGTGAGTGTGGCCTCTCTACTGCTGCTGTGTTGCACGTGTAGAAAATACC
GCCGCAGAGCAAGTCGTCTGCCGTTTGCAGCGAATGCTCGACAGCTGTCT
GTGTACTGGTACAATTGTACCATGTTGTAGCGGAGGCCTCGGAGCTTGCT
GGCCCCGGTAGGCCGCTGCTTGTCCTGCAAACCTGATTAGCGTCGCTTGC
TCGAGCGTTGCTTGCTCTGTTTGTCCTTTTACCTCTAACACGGTTTGTCG
GTGTGTTGTAGTGCAAGACTTTGGGGAACGGCGATCCGTACTTGGCCTAC
TGCTGCTGTATTGGTTGGTACATCGGTCCACGCCGTTGCATCATTTTAGC
CGGCTCTTTGTGTACACTCTCTCGGGCGCCCAACCAAAACACTGCTGTTG
TATTGTACAAAGAGCATGGGACTGATGCGGTGCTCACTGCCTTGCCGACC
CTGCCACAGGTGAGACGAAAGGTATCGGCTGCCTCCCGCGCTGCTTCTTC
GGCCTCTCCCCTGGCGGAGCGAGCGCGAGACTCTCAGGGGGTAGTGATCG
TGATGGAATCGCAGCGGCAGGTAAGACCTGCCGTATTTTACTGCTCGGCC
GTTGCTGCATGCATATGTACAGCAGTAGGAGATTACCGACCAAAAAGGGT
TATAAATCCGACGCCGCTCCCACCTGCAACAACGCGATGTCTGCCACGTT
AACGTTAACGTGGACGAGAGATGAGAGCTGCCCCATGATGCGCATGAAGG
CAACACACATAACCGCGTGTGCAGAGACGCAAGTCCAGAGCGCAGAACGA
CTGCACGTGCGGTGCAAGCTTAAGGTTCTTGCCAGGTCCACATCATCACA
TCATTTCATTGCTACAACACAGTTGTATCGCTTGTAGGTTTGAGTACATC
AGTGCAGCGCCGTCATTGTGTATGGGAGCGCAAGTCTAGCGTTCGCGAAG
ATCGTATGCGTTCAGCGTACAGCACACAGCAGTAGTACACATGTGTAGTT
CGCCTTTGTGTTCCGAACCGGCCACACCTGCCCACTGCCCCCGCACGGCA
AGCGCTGTTGGACTGCTGTCATGGTGTTGGGGTTACAACAGCACAGTACA
CGCTCGGCATCATGAGAATGAGGAGCACGACAGGAGCGGGGGCCTCCACC
ACGTGGGAAGCTCTTGCTAAGTTATTGCCCCCACAACATGCTACCCACGG
TTGCTGTGTGTTTGCTGTGCTTTCTGCACCCCTGCGGAAGCTCGTGTAGG
CCATGTTTTTGGTGGGAGGAAGACCGGGGGTTGTAGCGGTCGTGATGTTA
TTCCCCCACCACCTGTTCACGGTGGATGCTGTTTGCCGTGCTCTCTGCAC
CCCTGCGACAAACTCACGCACAGGCTGCTGGGGGGGGGGAGGCCGTTAGC
GGTCGCTCGTCGACGGGAAGCAACGGCGCGTCGAAGCGCGCTAGGCTCAC
GGGGAAAGAGGCCCACGGCTCGCGCAGGTGCGTTCCATGCACTTTGGCGA
GTGAGAGAAAGCGTCGTGGTTACTACGAGGGACATGTTTTCGGGAATTTG
TCTGATCCGCCTTAACCTATCTGGTTGGTTTCCGGTCTGGCGCCAGACAC
CACCTTTGTTTCTTGTCACCGTTTCGACAAACAAACATGGGCTTTGAAGG
ACGCGTCCGGCGGTTGTTCCCCCGAGTCGGACGCACGGCCGAGAGGTGTC
TCGACCTCTTCCGTCTTGAGGTCGCGAGCCTCAGTTTCTGGCGGGGAGTG
TTTGCGCCGTAACTAACGCCTCTCGTAGAGTGCCGAAGTTGGCAAAACGT
TCATCTCGCTGCCGTGGCGGGGCCGCGCTTGTTTCCGACATCCCACCCCT
TTCCTTTTGGCGCATAATAATCGCACACCGTCGCTACAAACGCTGCGCGA
GGGGAAACGAATTCTGGAGGGTATTTCGAAAGGGCACCGTTGGTGCAGTT
TCTTGCCGCAGTTTCCAAACGCTGCCGGGTGGACGGAGTTCCGAGGAGGC
GTTTCGAACGATTGTGCCCTCTACGCACACAGCAGGTTTTCTACACCACA
CCTTTTCACTCTTTGCCCTTTTTTACGACACGCTTGTTCCCTTCTCGTCG
ACAGGGAGACGGCGAGCAACTTGGAGCTGGCGGGAGTTTTGGAAGCCCTC
GGTTCGCCGTCGACCGGGGAGGTGGCGATGGGGGAGGCGGCGGCAGGGGG
TGAAACCGTCGCGGCCTCCGCCAAGAACGCGAAGAGGCGGCACAAACGCC
GGATGACCGCCGACATCTTGGACATCAACAACATCTTTGACGACAGCATG
TCCAGTGATGGGCCACCCGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCCGCTGATATGGCTTCGCCGCCGCCCCCACCGCCGCCGAGCGGCA
CTGGACAAGCAGCGTCCCCCGCCTCCGCCGGCGGCCTGTCGAGCACCGGC
TTCGATAGTATGGACTTTTCCACACCCCGGTCGTCTGGCAGCCGACTCAG
CAGCTTGGAAGGGGGCGGCGGTGGCGACCAGATGATGGCCGGCGCCGAGG
AGGCCGACGGCGGAGACGAAACCGCCGACTTCTCGGCGATCTTCAAGCTC
GTGGCGCAGGGGTCAACGCCGGCGGGGAAGAAGGGAACGCCTACTGGGGG
GGGTTCGCAGGCTGGCGCCGGCGGCGGTAGCACCCCACGACCACCTGCTG
GACGCCCCAGGGCGAGGCACCACAGCAACCAGAAGCCCGGTCGCGACAGC
TTGGCGCAGGGGCTCGTTGAGCCGGCTTCTTTGCCGCCTGGGGCGTTGGA
GAGGGCTGGGAGCGGTGGCGGTGGGGTCAAAGAGGTGGCTCCTGCCGCCA
ACAATCCTGCGGCCCCTACGGAGCGGGTGCGGAGGCCGAGGCATTCCATA
TGGAGGGCGACGCCGCCGCACGATTGTGAGGGCTTGGCGGTGCCGACACC
GGACCCGGTAAGAGGAGATGGTTGTTTAACGGTTGCTTTTCATGCATGCC
TCGCACGTGGCGTCGTGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGGTGG
TGGTGGTGGTGGTGTTACTTCTGACTGTCCCAACAATTCCTATGTTGGAG
TTGTGGTGGTGATAGGCTTTTCTACTGGTTGTCTGCAACACCTCTCCTTG
TGCGTCCTATGGATTTTAAGTCACCGTGGCTCTGTTTAACCCTCTTTTTG
TGGGGCCTACAGCAGTATGGGTATTGTATTGCATCACGGTATGTACTGGC
GGTGAAAGTCGTCTTGCGGTTGCTGTACTTTTGCGTTCTGTTGTGGCTGG
GGCCTTCCACGCGTTTCAGCTCGCCACCGAAGCTGGGTTTCCGATTGTGG
TTCGGCCGATCGTGTCGTTGCCGATGACAGCCGGCGCTTGGCCTCATTAC
CGCGCGGGACTTTACCGATAGGGAAAGGTTAGGGTTGCCTTTGGACCTTA
AATGGCGGGGATCTCGACCAATCATGAACGCACGTGGTGTTGCAAAGTGG
AAACGTTTGGCTTCCGCAGCGCGATACATGGAGTCAACCTATGTGATGCC
CTTAGGAGCGCGACAGATATTGTGCCTGCCGCACATGATTTGACACGGCG
CGGTTGGCGACGTCTGCCCCCGTTTTTGCATTGCGCTATCTATCGTTTCC
TTTTCCATGACACAGCGCCACCACGACAGCCTCCGTCCATCGCACCAGTC
TACCTTCAACTCGCCCGACCCTGACAGCAGTGCAGCAAGCGGCATCACTG
GTACCCCCGCCAGCGGCAGCGGTGAAACCGGCGATGTTGGCAACCTGTTG
GCGGATTTGTCGGCCAACAGCATGATCAGCTCTGCGTCGGGCGGAGAGCT
TGGGGGAGACGACGGCCAGTATACGGCCATGAATGTTGACGCGGTCATGG
CGGAGCTCGAATCTGACGGGCTGGGGGGCCGCGATGACCGTCCGACAGCC
GTGGACATGGAGGCCCGGGTGGCGGAGCTCGCGAGCGGCGGTGGCGGGAC
CGGCGGCAAGAAGAAGCGGCGGAATACCGCCGAGAAGTTGACCGTTGACT
CGTTGCTGGGGTCGTTGGATAGCCCCGCGCAGTCCTCCAGCGGGACACGC
TCAGCGGAGACTTCCCGAGATTTAGCTGAGGGTGGGGGTGCGACGCCGGA
AGGTGCGACGGAACCGAGCAGCGTTGACGCGACGAGCGAACAGCCCGCCG
TTCTTCTCCCCAAGGCGGGTAAGAAGTCTTCCCGGCGCGACACCGTGGAT
CCTTCGGACTTCCAGGACCTCTTGCAGGACCCCGACATGATAACGCCTAC
GTCTTCCCCGGCCGCCACCGCCGCGGCAGCAGCAGGCGCCATGGCGCTGG
GCGACGATTCGTCGTCTCTGGCTACCTCTTCTCCTGGCAAGCAGGGCGCC
GCCGCAGCTACAACTCCCGGGAGCAATAGGTCTGGCGCGACGGCTGTGTC
CATGCGCGGGGTATTCGAGCCTATAAGCCCGTCGCTCGGGGGCTCTGCGG
AGAAGGAGGAGGAGGGTCTGCCTGTCGGCGCGGGGGTTGTGGTCACCCCG
CGGTTCGACCGCCCTGTCAGCGGCTCAGGTGGCGGGAGGAGGAAGGACAG
CGGTGGGACGGCGGGAAACGGGTCGGTGTGTGGGCTGTTGGACTCGACGC
CTTCCCCCGGTGGTGGTGGTTTGGACCAGAGCTTCGGTGGAGCGGAGGGG
ATGGGGAAGCTCCCACCCATGACGGGCAGGGCGGGAGCGATCGCAGCTAT
ATTGGACAGCGGGACCCGCGGCCGCAACAGCAGCAGCGCCAAAGCGGCTA
AAAATGGGGTGCGTATGTTTGTTTTGGTCGTTTGGAGGGTTGCACCATGT
GGTTCCCGCTGGGCGGGGTGGAAGGGAATGGATAGGAAGGTTCAGCGCCA
GAGACCGTGTCTTTATGCGATGCGCAAAGAGTTTTGGTTGGACCGCGCCC
TTTTTCGTCTGTGTTTAGCTTCATCACGTTGGGCAACTGTCGCGGTGTTT
TTTTTTAGCGGGCTTAGCAGATCTACGTGTGTTTCCTGCCGCGTTTTAGT
AGACATATGCCCGGAAGTAGCTACGGACAAGCTTTTGGCTTACGTCGGTC
GGGTTTGACTTCGGCAGCCTTTTCCTCGCCGCATTCGTTCCTCACCACCG
GTCGTTGTCATTCCGCTTTGCTTCCCCCCCCCCCCCCGCCGATGGCTACT
TACCTCTTCTGCCAGCGGCGAAACACCTGCGAACCCGAGGAGTTCGGTGA
CGTCATCGCGGACTTGGACTCTGAGCCCGACACCCCGGCTTCCTCTAAGG
ACGATTCCCGCCTTGGAGAGGACGCTGCTGTGTCTCCGCTGCAGGAGAAG
GAAGGACGTCTGGAGACCCTCTCCACCCCTTCGAGCAGCTCCAGGTGAGA
CCGACTGACCTAGCTTGCGCCCCCGTGTTGAGGCTGTTAATACCGTTCAG
CAGAAACAGCTGACTCTTTGGCGTGTCTATACTGTTACGTTTATGGGAGG
GCTTTTGGTGCTCCGGACCCCTCTTCCACTTGACCCCCTATTTCTGTTTT
ATGGCGTCTTGTGATCCTCCGAACTGGTACATGCCTCAAGCACCAACGTG
AGCAACATCAGGTTGCATGTTTTCGATATGACAAAAATTCACTTTTTCTC
GCACAGGACCGTACGGGCAAACCCACTTGTCTACTTTGCTCTATTCAACA
TCTTCGCGTTCGTGATGCATACGTGTTTTCTCGTGGTCTACCGTATGTTG
TAAAGAGATAGATAAATCACCCCCCGGCGACTGGCACCAAGGATGGCCAT
GGTTATGGGAAAAAGCTCCACCACTTTGGTGGATTTGCTGGAAACGGCGG
TTGATACGACTCAGCGCCGGGCACTTACATGCGACCCGCGGGCGCCAGCG
TTTCGTTTTGTTTGTAGCACTTGAGGAGGATGTCGAGTTGCACTGACACG
TTTCACACTCCGTACCCGCGCGCTTGCATGCACTTGTGTCTGTGTCTGGT
GTAGCCACGACTCCCCCCTGGAGGTATCAGAGCCGGCGGCTCAACAAGCG
GAGCAAGAGGCGGGGGCTAAGGCCGGTGCCGCGGGGCCGGGAGAGAGCAT
GGACGTGGACACGGACGAAGACTCTTTCGACTCCCCTGGAGGTGGCTCTG
AAGACGAGCCCAAGCCGAAGGACAAGGACGATAGGCGGACCACCGCTTCT
CCGACTACGCTAGGCGCGCTCCTGGAAGACTTGGGGGCTCAGGGCGAGGT
AAGGGGGGGGGGGGGGGGGTCGAGGGGATCCGGAAGAAGGGGCCAGAGAA
AAGTTTTCCTTTCGTGTGGTGTTCCNNNNNNNNNNAGACAACGCCCACGA
GAGAGAGAAGGGGAAGGGGGGCCCCCCCCGCCTCCCGCGGGCGGGGGGGG
GCGCGCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGG
GGGGGGGTCGAGGGGATCCGGAAGAAGGGGCCAGAGAAAAGTTTTCCTTT
CGTGTGGTGTTCCCTGCGTGGTAGATTTGCTGTGTGATTGTTGCGGGGGG
TTCCGGCAAAGAGGCGTGCGAGGATGGCGAAAAAACGGCAGAATGGTTTG
AGTACCCGTTTTCAAGTTGAGGGACGTTGTGTTGATTTTGTGTCTACCAT
AGGACCATAAAAAATATGCGCTATCCCTTGCTTCGCACTCCACAGGATGA
ACAATGTAGTGTGGTAGAATGGTAGAATTGTTCCAGAAAGTGAGCCCTCA
CGAGTAGTAGTAGAAGTGCTGAATGCAGCAGTGCATGAGTTTTTGTTTTC
ACGCAACCCATACTGCAGTATCAAGCGAGAGCCCCTCCCGTCGACCAATC
CGATTTTCATCTTTTTTATCGTCGCCATACACACTCATGTCCCAGGACGA
GACTGACGAGCTCGGCACGGTGAACTCGGTGAACTCCATCGAGGTCGTCA
AGGCATCTCCTCCACAAGAGAACGAAAGCGGCCCTTCTGATAACGGTGGG
TCCTGCGAAGGGGCGTTAAAAGATTGA back to topCoding sequence (CDS) from alignment at E_fasciculatus_S2_contig7312:384..7460- >mRNA_E_fasciculatus_S2_contig7312.15505.1 ID=mRNA_E_fasciculatus_S2_contig7312.15505.1|Name=mRNA_E_fasciculatus_S2_contig7312.15505.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=2817bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7312:384..7460- (Ectocarpus fasciculatus EfasUO2)
ATGGATGTCGTGGACGAGAACCAGGGCTCACATGGAATAATTGGGTCGCC
GGTGAGACGAAAGGTATCGGCTGCCTCCCGCGCTGCTTCTTCGGCCTCTC
CCCTGGCGGAGCGAGCGCGAGACTCTCAGGGGGTAGTGATCGTGATGGAA
TCGCAGCGGCAGGCTGCTGGGGGGGGGGAGGCCGTTAGCGGTCGCTCGTC
GACGGGAAGCAACGGCGCGTCGAAGCGCGCTAGGCTCACGGGGAAAGAGG
CCCACGGCTCGCGCAGGGAGACGGCGAGCAACTTGGAGCTGGCGGGAGTT
TTGGAAGCCCTCGGTTCGCCGTCGACCGGGGAGGTGGCGATGGGGGAGGC
GGCGGCAGGGGGTGAAACCGTCGCGGCCTCCGCCAAGAACGCGAAGAGGC
GGCACAAACGCCGGATGACCGCCGACATCTTGGACATCAACAACATCTTT
GACGACAGCATGTCCAGTGATGGGCCACCCGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTGCCGCTGATATGGCTTCGCCGCCGCCCCCACCGC
CGCCGAGCGGCACTGGACAAGCAGCGTCCCCCGCCTCCGCCGGCGGCCTG
TCGAGCACCGGCTTCGATAGTATGGACTTTTCCACACCCCGGTCGTCTGG
CAGCCGACTCAGCAGCTTGGAAGGGGGCGGCGGTGGCGACCAGATGATGG
CCGGCGCCGAGGAGGCCGACGGCGGAGACGAAACCGCCGACTTCTCGGCG
ATCTTCAAGCTCGTGGCGCAGGGGTCAACGCCGGCGGGGAAGAAGGGAAC
GCCTACTGGGGGGGGTTCGCAGGCTGGCGCCGGCGGCGGTAGCACCCCAC
GACCACCTGCTGGACGCCCCAGGGCGAGGCACCACAGCAACCAGAAGCCC
GGTCGCGACAGCTTGGCGCAGGGGCTCGTTGAGCCGGCTTCTTTGCCGCC
TGGGGCGTTGGAGAGGGCTGGGAGCGGTGGCGGTGGGGTCAAAGAGGTGG
CTCCTGCCGCCAACAATCCTGCGGCCCCTACGGAGCGGGTGCGGAGGCCG
AGGCATTCCATATGGAGGGCGACGCCGCCGCACGATTGTGAGGGCTTGGC
GGTGCCGACACCGGACCCGCGCCACCACGACAGCCTCCGTCCATCGCACC
AGTCTACCTTCAACTCGCCCGACCCTGACAGCAGTGCAGCAAGCGGCATC
ACTGGTACCCCCGCCAGCGGCAGCGGTGAAACCGGCGATGTTGGCAACCT
GTTGGCGGATTTGTCGGCCAACAGCATGATCAGCTCTGCGTCGGGCGGAG
AGCTTGGGGGAGACGACGGCCAGTATACGGCCATGAATGTTGACGCGGTC
ATGGCGGAGCTCGAATCTGACGGGCTGGGGGGCCGCGATGACCGTCCGAC
AGCCGTGGACATGGAGGCCCGGGTGGCGGAGCTCGCGAGCGGCGGTGGCG
GGACCGGCGGCAAGAAGAAGCGGCGGAATACCGCCGAGAAGTTGACCGTT
GACTCGTTGCTGGGGTCGTTGGATAGCCCCGCGCAGTCCTCCAGCGGGAC
ACGCTCAGCGGAGACTTCCCGAGATTTAGCTGAGGGTGGGGGTGCGACGC
CGGAAGGTGCGACGGAACCGAGCAGCGTTGACGCGACGAGCGAACAGCCC
GCCGTTCTTCTCCCCAAGGCGGGTAAGAAGTCTTCCCGGCGCGACACCGT
GGATCCTTCGGACTTCCAGGACCTCTTGCAGGACCCCGACATGATAACGC
CTACGTCTTCCCCGGCCGCCACCGCCGCGGCAGCAGCAGGCGCCATGGCG
CTGGGCGACGATTCGTCGTCTCTGGCTACCTCTTCTCCTGGCAAGCAGGG
CGCCGCCGCAGCTACAACTCCCGGGAGCAATAGGTCTGGCGCGACGGCTG
TGTCCATGCGCGGGGTATTCGAGCCTATAAGCCCGTCGCTCGGGGGCTCT
GCGGAGAAGGAGGAGGAGGGTCTGCCTGTCGGCGCGGGGGTTGTGGTCAC
CCCGCGGTTCGACCGCCCTGTCAGCGGCTCAGGTGGCGGGAGGAGGAAGG
ACAGCGGTGGGACGGCGGGAAACGGGTCGGTGTGTGGGCTGTTGGACTCG
ACGCCTTCCCCCGGTGGTGGTGGTTTGGACCAGAGCTTCGGTGGAGCGGA
GGGGATGGGGAAGCTCCCACCCATGACGGGCAGGGCGGGAGCGATCGCAG
CTATATTGGACAGCGGGACCCGCGGCCGCAACAGCAGCAGCGCCAAAGCG
GCTAAAAATGGGCGGCGAAACACCTGCGAACCCGAGGAGTTCGGTGACGT
CATCGCGGACTTGGACTCTGAGCCCGACACCCCGGCTTCCTCTAAGGACG
ATTCCCGCCTTGGAGAGGACGCTGCTGTGTCTCCGCTGCAGGAGAAGGAA
GGACGTCTGGAGACCCTCTCCACCCCTTCGAGCAGCTCCAGCCACGACTC
CCCCCTGGAGGTATCAGAGCCGGCGGCTCAACAAGCGGAGCAAGAGGCGG
GGGCTAAGGCCGGTGCCGCGGGGCCGGGAGAGAGCATGGACGTGGACACG
GACGAAGACTCTTTCGACTCCCCTGGAGGTGGCTCTGAAGACGAGCCCAA
GCCGAAGGACAAGGACGATAGGCGGACCACCGCTTCTCCGACTACGCTAG
GCGCGCTCCTGGAAGACTTGGGGGCTCAGGGCGAGGACGAGACTGACGAG
CTCGGCACGGTGAACTCGGTGAACTCCATCGAGGTCGTCAAGGCATCTCC
TCCACAAGAGAACGAAAGCGGCCCTTCTGATAACGGTGGGTCCTGCGAAG
GGGCGTTAAAAGATTGA back to top
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