mRNA_E_fasciculatus_S2_contig7281.15476.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7281.15476.1
Unique NamemRNA_E_fasciculatus_S2_contig7281.15476.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: U-box (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGQ2_ECTSI)

HSP 1 Score: 282 bits (721), Expect = 1.370e-87
Identity = 168/200 (84.00%), Postives = 171/200 (85.50%), Query Frame = 1 
Query:  172 MLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADKEEAKAGGEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPDSGEVLHKGPMLGELPALGRPPVSSSSGGASSPTAYDCKRDSEERRNDDAGVGGR 771
            MLLEN SDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIR+LLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADKE       XXXXXXXXXXXXX                XXX P+ GEVLHKGPMLGELPALGRPPVSSSSGGAS PTAYD KRDSEERR+D AGVGGR
Sbjct:    1 MLLENESDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRDLLREIGGEEAAKTMPTPTFSVCVNEQGQMFVRVTAGEADKEXXXXX-XXXXXXXXXXXXXXASSPSRSRSPQGRAGSXXXGPEGGEVLHKGPMLGELPALGRPPVSSSSGGAS-PTAYDSKRDSEERRHDGAGVGGR 198
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: U-box (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ1_9PHAE)

HSP 1 Score: 269 bits (688), Expect = 7.480e-83
Identity = 157/208 (75.48%), Postives = 161/208 (77.40%), Query Frame = 3 
Query:  813 HEASRDSNSLGMPGETDEGQAPEAIICQLSKRVARDPVRTPYGHLFDRQMIGLWLSKQGSICPLTGQPLVEAELKPDAKAKAEAKAWNDGLLAQKKHSATASSXXXXXXXXXXXXXXXXXRSKTSGDRARQGEMAKESSTARGKADPAAAVGAEGRSSGXXXXXXXERNGADLETAAPAKGAGAAA--GKERRGSKEAENNGDDIYDF 1430
            HE SRDSNSLGMPGETDE QAPE IICQLSKRVARDPVRTPYGHLFDRQMI LWLSKQGSICPLTGQPLVEAELK D KAKAEAKAWNDGLLAQKKHSAT +S                 R KTSG  A +G+MAKESST RGKAD AAAVGAEGRSS        ERNGADLET APAK A      G+ERRGSKEAENN DDIYDF
Sbjct:  165 HEVSRDSNSLGMPGETDEEQAPEGIICQLSKRVARDPVRTPYGHLFDRQMIRLWLSKQGSICPLTGQPLVEAELKADGKAKAEAKAWNDGLLAQKKHSATVASVGRGGPSSAAAANGG--RIKTSGGTAGEGQMAKESSTVRGKADAAAAVGAEGRSSSSGG----ERNGADLETPAPAKDAXXXXXXGRERRGSKEAENNVDDIYDF 366
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZT12_9STRA)

HSP 1 Score: 130 bits (327), Expect = 5.370e-29
Identity = 64/137 (46.72%), Postives = 90/137 (65.69%), Query Frame = 1 
Query:    1 EVCHRGFTAIAPLLVRAGADAAHIPDAKASCGAHIMRGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAAKTMPTP 411
            E CHRGF  I   L+       HIPD +AS    + +  PQSALG A+R GF+ I K+LLE GSDKD  N +GWTPLHEA ++NH+D  + LLV+GA+ T K+ +GA+P+++ S   +R++L+E+GG +A      P
Sbjct:  180 EACHRGFDGIVRKLLTGNKTLDHIPDVEASKAFPLAKPPPQSALGEASRCGFEDIVKVLLEAGSDKDLVNHLGWTPLHEAAFYNHVDVARTLLVYGANATKKDARGAVPFHVASLPSVRDVLKELGGPDACPERDCP 316
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TU65_9STRA)

HSP 1 Score: 118 bits (295), Expect = 9.730e-25
Identity = 58/120 (48.33%), Postives = 82/120 (68.33%), Query Frame = 1 
Query:   67 HIPDAKASCGAHIMRGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAA-KTMPTPTFSV 423
            HIPD +   G+  ++  P +ALG AAR GF  I K+L+E G+DKD  N  GWTPLHEA + NHL TV+ LL++GA+PTI+N +GA+PY + +   +R  +REI GE+A  ++MP  +  V
Sbjct:  223 HIPDDECLSGSPFLQAPPTTALGEAARCGFSAIIKVLVEAGADKDLANHEGWTPLHEAAFHNHLGTVKTLLIYGANPTIRNKKGALPYQLAALPAVRTTIREIWGEDAVDESMPNLSAGV 342
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JEM2_9PHAE)

HSP 1 Score: 102 bits (255), Expect = 2.040e-22
Identity = 51/55 (92.73%), Postives = 53/55 (96.36%), Query Frame = 1 
Query:    1 EVCHRGFTAIAPLLVRAGADAAHIPDAKASCGAHIMRGAPQSALGAAARGGFQTI 165
            EVCHRGFTAIA LLV+AGAD AHIPDAKASCGAHIMRGAPQSALGAAARGGFQT+
Sbjct:   75 EVCHRGFTAIAALLVKAGADVAHIPDAKASCGAHIMRGAPQSALGAAARGGFQTV 129
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: Ankyrin (repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z8V9_9STRA)

HSP 1 Score: 89.7 bits (221), Expect = 1.510e-15
Identity = 41/67 (61.19%), Postives = 52/67 (77.61%), Query Frame = 3 
Query:  873 APEAIICQLSKRVARDPVRTPYGHLFDRQMIGLWLSKQGSICPLTGQPLVEAELKPDAKAKAEAKAW 1073
            AP    C LS+R+ RDPVRTPYG+++DR MI +WL +QGSI PLTGQPLVEAELK D + K+  ++W
Sbjct:  342 APPNFKCNLSRRLMRDPVRTPYGNVYDRAMIAMWLQQQGSIDPLTGQPLVEAELKEDGELKSAIESW 408
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2XYQ7_9STRA)

HSP 1 Score: 79.3 bits (194), Expect = 1.450e-12
Identity = 43/119 (36.13%), Postives = 60/119 (50.42%), Query Frame = 1 
Query:   67 HIPDAKASCGAHIMRGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNHLDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAAKTMPTPTFSV 423
            ++PD  +S     +R   Q AL                     KD+ N +GWTPLHEA +F   + VQ LLV+G D T K   GAM Y++ S   I+ +++++GG EAA  M  P  SV
Sbjct:  189 YLPDIDSSTATPFVRAPAQHALAXXXXXXXXXXXXXXXXXXXPKDKANQLGWTPLHEAAFFCQKEIVQTLLVYGVDATAKTSMGAMAYHLASLPDIKQVIKDLGGAEAAVEMDQPLKSV 307
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: Hypothetical (protein n=3 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DAJ1_HETAK)

HSP 1 Score: 72.0 bits (175), Expect = 3.310e-11
Identity = 28/67 (41.79%), Postives = 45/67 (67.16%), Query Frame = 3 
Query:  876 PEAIICQLSKRVARDPVRTPYGHLFDRQMIGLWLSKQGSICPLTGQPLVEAELKPDAKAKAEAKAWN 1076
            P    C ++  + ++PV++P GH+F++  I LWL  QGS+CP+TGQPLV+ +L+PD + K     W+
Sbjct:   73 PREFTCAINGHLMKEPVKSPGGHVFEKSTITLWLRMQGSVCPITGQPLVQEDLEPDEELKTRIMRWH 139
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: U-box (domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9Y7V6_9STRA)

HSP 1 Score: 72.8 bits (177), Expect = 5.030e-10
Identity = 31/80 (38.75%), Postives = 50/80 (62.50%), Query Frame = 3 
Query:  876 PEAIICQLSKRVARDPVRTPYGHLFDRQMIGLWLSKQGSICPLTGQPLVEAELKPDAKAKAEAKAWNDGLLAQKKHSATA 1115
            P   +C ++K++ +DPV++PYGH+F+R +I  W++  GS CP+TG+PL   +L  D    +E +AWN     + K   TA
Sbjct:  416 PPEFLCAITKKLLKDPVKSPYGHVFERAVIEKWINNYGSRCPVTGEPLALGQLVADDALLSEIEAWNAPESPKSKQQETA 495
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Match: U-box (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YDZ0_9STRA)

HSP 1 Score: 72.4 bits (176), Expect = 7.330e-10
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 3 
Query:  873 APEAIICQLSKRVARDPVRTPYGHLFDRQMIGLWLSKQGSICPLTGQPLVEAELKPDAKAKAEAKAWNDGLLAQKKHSATA 1115
            AP+   C +S++V +DP+R+PYG +F+RQ+I  W    G+ CPLTG+PL   +L  D   KA  + W  G   + +  ATA
Sbjct:  470 APQEFKCAVSRKVLKDPLRSPYGQVFERQVIEAWFRDFGNRCPLTGEPLTPQQLVRDEGLKARIREWKHGSRLKAETEATA 550
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7281.15476.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
U-box1.370e-8784.00domain-containing protein n=1 Tax=Ectocarpus silic... [more]
U-box7.480e-8375.48domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Hypothetical5.370e-2946.72protein n=1 Tax=Pelagomonas calceolata TaxID=35677... [more]
Hypothetical9.730e-2548.33protein n=2 Tax=Phaeomonas parva TaxID=124430 RepI... [more]
Uncharacterized2.040e-2292.73protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Ankyrin1.510e-1561.19repeat-containing domain protein n=1 Tax=Tribonema... [more]
Hypothetical1.450e-1236.13protein (Fragment) n=1 Tax=Fibrocapsa japonica Tax... [more]
Hypothetical3.310e-1141.79protein n=3 Tax=Heterosigma akashiwo TaxID=2829 Re... [more]
U-box5.030e-1038.75domain-containing protein n=1 Tax=Thraustotheca cl... [more]
U-box7.330e-1040.74domain-containing protein n=1 Tax=Pythium brassicu... [more]

Pages

back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7281contigE_fasciculatus_S2_contig7281:242..5035 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop1
Start1
Seed ortholog score72.0
Seed ortholog evalue4.8e-10
Seed eggNOG ortholog325452.fgenesh_scip_prom.46568.8470
Preferred nameMYO19
Model size1430
KEGG koko:K10356,ko:K10357,ko:K22366
Hectar predicted targeting categoryother localisation
GOsGO:0000001,GO:0000003,GO:0000011,GO:0000131,GO:0000132,GO:0000146,GO:0000149,GO:0000166,GO:0000226,GO:0000278,GO:0000281,GO:0000302,GO:0000331,GO:0000902,GO:0000904,GO:0000910,GO:0000912,GO:0000915,GO:0001101,GO:0001558,GO:0001654,GO:0001676,GO:0001726,GO:0001745,GO:0001750,GO:0001751,GO:0001754,GO:0001891,GO:0001931,GO:0001942,GO:0002250,GO:0002252,GO:0002253,GO:0002376,GO:0002429,GO:0002431,GO:0002433,GO:0002443,GO:0002449,GO:0002456,GO:0002460,GO:0002682,GO:0002684,GO:0002757,GO:0002764,GO:0002768,GO:0002790,GO:0003006,GO:0003008,GO:0003014,GO:0003091,GO:0003674,GO:0003774,GO:0003779,GO:0003824,GO:0005102,GO:0005488,GO:0005509,GO:0005515,GO:0005516,GO:0005524,GO:0005543,GO:0005546,GO:0005547,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005635,GO:0005737,GO:0005739,GO:0005740,GO:0005741,GO:0005768,GO:0005773,GO:0005794,GO:0005826,GO:0005829,GO:0005856,GO:0005882,GO:0005884,GO:0005886,GO:0005902,GO:0005903,GO:0005911,GO:0005929,GO:0005933,GO:0005934,GO:0005935,GO:0005937,GO:0005938,GO:0006082,GO:0006403,GO:0006582,GO:0006629,GO:0006631,GO:0006633,GO:0006725,GO:0006810,GO:0006886,GO:0006887,GO:0006892,GO:0006897,GO:0006904,GO:0006909,GO:0006928,GO:0006935,GO:0006950,GO:0006955,GO:0006970,GO:0006971,GO:0006979,GO:0006996,GO:0007005,GO:0007010,GO:0007015,GO:0007017,GO:0007018,GO:0007029,GO:0007030,GO:0007031,GO:0007033,GO:0007049,GO:0007097,GO:0007107,GO:0007114,GO:0007117,GO:0007118,GO:0007154,GO:0007155,GO:0007163,GO:0007165,GO:0007166,GO:0007267,GO:0007268,GO:0007272,GO:0007275,GO:0007276,GO:0007281,GO:0007283,GO:0007286,GO:0007291,GO:0007317,GO:0007349,GO:0007399,GO:0007423,GO:0007530,GO:0007531,GO:0007533,GO:0007584,GO:0007600,GO:0007601,GO:0007610,GO:0007626,GO:0008021,GO:0008064,GO:0008088,GO:0008092,GO:0008104,GO:0008144,GO:0008150,GO:0008152,GO:0008289,GO:0008298,GO:0008360,GO:0008361,GO:0008366,GO:0008544,GO:0008610,GO:0009058,GO:0009267,GO:0009306,GO:0009506,GO:0009581,GO:0009582,GO:0009605,GO:0009612,GO:0009628,GO:0009636,GO:0009653,GO:0009719,GO:0009725,GO:0009791,GO:0009826,GO:0009856,GO:0009860,GO:0009887,GO:0009888,GO:0009908,GO:0009914,GO:0009932,GO:0009966,GO:0009987,GO:0009991,GO:0010015,GO:0010026,GO:0010033,GO:0010035,GO:0010053,GO:0010054,GO:0010090,GO:0010091,GO:0010154,GO:0010243,GO:0010256,GO:0010522,GO:0010564,GO:0010639,GO:0010646,GO:0010720,GO:0010769,GO:0010770,GO:0010817,GO:0010821,GO:0010959,GO:0010970,GO:0010975,GO:0010976,GO:0012505,GO:0012506,GO:0014070,GO:0014074,GO:0014910,GO:0014911,GO:0015031,GO:0015629,GO:0015833,GO:0016020,GO:0016028,GO:0016043,GO:0016049,GO:0016050,GO:0016053,GO:0016192,GO:0016197,GO:0016358,GO:0016459,GO:0016460,GO:0016461,GO:0016462,GO:0016477,GO:0016787,GO:0016817,GO:0016818,GO:0016887,GO:0017016,GO:0017022,GO:0017075,GO:0017076,GO:0017111,GO:0017137,GO:0017157,GO:0018958,GO:0019438,GO:0019748,GO:0019752,GO:0019867,GO:0019899,GO:0019900,GO:0019901,GO:0019904,GO:0019905,GO:0019953,GO:0019954,GO:0021700,GO:0022008,GO:0022402,GO:0022404,GO:0022405,GO:0022406,GO:0022412,GO:0022413,GO:0022414,GO:0022603,GO:0022604,GO:0022607,GO:0022610,GO:0022622,GO:0022898,GO:0023051,GO:0023052,GO:0023061,GO:0030010,GO:0030027,GO:0030029,GO:0030030,GO:0030031,GO:0030036,GO:0030038,GO:0030046,GO:0030048,GO:0030050,GO:0030054,GO:0030072,GO:0030073,GO:0030104,GO:0030133,GO:0030139,GO:0030141,GO:0030154,GO:0030175,GO:0030182,GO:0030307,GO:0030318,GO:0030334,GO:0030335,GO:0030424,GO:0030425,GO:0030426,GO:0030427,GO:0030479,GO:0030516,GO:0030554,GO:0030587,GO:0030659,GO:0030705,GO:0030832,GO:0030833,GO:0030837,GO:0030863,GO:0030864,GO:0030865,GO:0030866,GO:0030898,GO:0030899,GO:0031032,GO:0031033,GO:0031034,GO:0031090,GO:0031097,GO:0031152,GO:0031154,GO:0031175,GO:0031252,GO:0031254,GO:0031256,GO:0031267,GO:0031268,GO:0031270,GO:0031333,GO:0031344,GO:0031346,GO:0031410,GO:0031475,GO:0031585,GO:0031589,GO:0031667,GO:0031668,GO:0031669,GO:0031670,GO:0031941,GO:0031965,GO:0031966,GO:0031967,GO:0031968,GO:0031975,GO:0031982,GO:0031987,GO:0032009,GO:0032027,GO:0032060,GO:0032153,GO:0032155,GO:0032252,GO:0032271,GO:0032272,GO:0032400,GO:0032401,GO:0032402,GO:0032409,GO:0032412,GO:0032432,GO:0032433,GO:0032465,GO:0032501,GO:0032502,GO:0032504,GO:0032505,GO:0032506,GO:0032535,GO:0032553,GO:0032555,GO:0032559,GO:0032593,GO:0032787,GO:0032796,GO:0032868,GO:0032869,GO:0032870,GO:0032878,GO:0032879,GO:0032880,GO:0032940,GO:0032956,GO:0032970,GO:0032982,GO:0032989,GO:0032990,GO:0032991,GO:0033036,GO:0033043,GO:0033059,GO:0033267,GO:0033275,GO:0033298,GO:0033365,GO:0033554,GO:0034461,GO:0034613,GO:0034622,GO:0034642,GO:0034643,GO:0034762,GO:0034765,GO:0035091,GO:0035254,GO:0035255,GO:0035618,GO:0035619,GO:0035639,GO:0035690,GO:0035838,GO:0036094,GO:0036477,GO:0038093,GO:0038094,GO:0038096,GO:0040001,GO:0040007,GO:0040008,GO:0040011,GO:0040012,GO:0040017,GO:0040019,GO:0042051,GO:0042052,GO:0042221,GO:0042303,GO:0042330,GO:0042438,GO:0042440,GO:0042461,GO:0042462,GO:0042470,GO:0042476,GO:0042493,GO:0042542,GO:0042552,GO:0042592,GO:0042594,GO:0042623,GO:0042633,GO:0042641,GO:0042642,GO:0042759,GO:0042802,GO:0042803,GO:0042886,GO:0042995,GO:0043005,GO:0043008,GO:0043025,GO:0043167,GO:0043168,GO:0043169,GO:0043197,GO:0043200,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043254,GO:0043269,GO:0043325,GO:0043332,GO:0043434,GO:0043436,GO:0043473,GO:0043531,GO:0043588,GO:0043900,GO:0043902,GO:0043933,GO:0044085,GO:0044087,GO:0044089,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044281,GO:0044283,GO:0044297,GO:0044309,GO:0044380,GO:0044422,GO:0044424,GO:0044425,GO:0044428,GO:0044429,GO:0044430,GO:0044433,GO:0044441,GO:0044444,GO:0044446,GO:0044448,GO:0044456,GO:0044459,GO:0044463,GO:0044464,GO:0044550,GO:0044703,GO:0044706,GO:0044764,GO:0044837,GO:0044877,GO:0045033,GO:0045111,GO:0045165,GO:0045177,GO:0045179,GO:0045184,GO:0045202,GO:0045335,GO:0045595,GO:0045597,GO:0045664,GO:0045666,GO:0045773,GO:0045856,GO:0045921,GO:0045927,GO:0045995,GO:0046148,GO:0046189,GO:0046394,GO:0046530,GO:0046677,GO:0046683,GO:0046847,GO:0046872,GO:0046879,GO:0046903,GO:0046907,GO:0046982,GO:0046983,GO:0047497,GO:0048066,GO:0048193,GO:0048232,GO:0048278,GO:0048306,GO:0048308,GO:0048309,GO:0048311,GO:0048313,GO:0048364,GO:0048366,GO:0048367,GO:0048438,GO:0048467,GO:0048468,GO:0048469,GO:0048471,GO:0048513,GO:0048515,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048583,GO:0048584,GO:0048588,GO:0048589,GO:0048592,GO:0048608,GO:0048609,GO:0048638,GO:0048639,GO:0048646,GO:0048666,GO:0048667,GO:0048699,GO:0048731,GO:0048749,GO:0048764,GO:0048765,GO:0048767,GO:0048768,GO:0048770,GO:0048812,GO:0048813,GO:0048814,GO:0048820,GO:0048827,GO:0048856,GO:0048858,GO:0048868,GO:0048869,GO:0048870,GO:0048871,GO:0048878,GO:0050767,GO:0050769,GO:0050770,GO:0050772,GO:0050773,GO:0050775,GO:0050776,GO:0050778,GO:0050789,GO:0050793,GO:0050794,GO:0050808,GO:0050848,GO:0050877,GO:0050878,GO:0050891,GO:0050896,GO:0050900,GO:0050931,GO:0050953,GO:0050982,GO:0051015,GO:0051017,GO:0051020,GO:0051046,GO:0051047,GO:0051049,GO:0051050,GO:0051094,GO:0051128,GO:0051129,GO:0051130,GO:0051179,GO:0051234,GO:0051239,GO:0051240,GO:0051270,GO:0051272,GO:0051279,GO:0051282,GO:0051285,GO:0051286,GO:0051293,GO:0051294,GO:0051301,GO:0051302,GO:0051493,GO:0051494,GO:0051591,GO:0051606,GO:0051640,GO:0051641,GO:0051643,GO:0051645,GO:0051646,GO:0051647,GO:0051648,GO:0051649,GO:0051650,GO:0051653,GO:0051654,GO:0051656,GO:0051674,GO:0051686,GO:0051703,GO:0051704,GO:0051716,GO:0051726,GO:0051875,GO:0051904,GO:0051905,GO:0051924,GO:0051960,GO:0051962,GO:0055037,GO:0055044,GO:0060001,GO:0060002,GO:0060151,GO:0060281,GO:0060282,GO:0060284,GO:0060327,GO:0060328,GO:0060341,GO:0060429,GO:0060560,GO:0060627,GO:0060996,GO:0060997,GO:0061024,GO:0061387,GO:0061458,GO:0061572,GO:0061573,GO:0061640,GO:0061645,GO:0065003,GO:0065007,GO:0065008,GO:0065009,GO:0070252,GO:0070382,GO:0070648,GO:0070649,GO:0070650,GO:0070727,GO:0070887,GO:0070938,GO:0071229,GO:0071230,GO:0071310,GO:0071375,GO:0071417,GO:0071495,GO:0071496,GO:0071520,GO:0071563,GO:0071695,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0071889,GO:0071944,GO:0071963,GO:0071976,GO:0072330,GO:0072384,GO:0072657,GO:0072659,GO:0072676,GO:0072678,GO:0072697,GO:0080147,GO:0090066,GO:0090140,GO:0090426,GO:0090436,GO:0090558,GO:0090567,GO:0090596,GO:0090626,GO:0090627,GO:0090702,GO:0090726,GO:0097061,GO:0097159,GO:0097204,GO:0097367,GO:0097435,GO:0097447,GO:0097458,GO:0097518,GO:0097574,GO:0097575,GO:0097708,GO:0097718,GO:0097730,GO:0097731,GO:0097733,GO:0098588,GO:0098630,GO:0098657,GO:0098743,GO:0098773,GO:0098793,GO:0098794,GO:0098805,GO:0098840,GO:0098858,GO:0098862,GO:0098916,GO:0099080,GO:0099081,GO:0099089,GO:0099111,GO:0099118,GO:0099120,GO:0099173,GO:0099402,GO:0099503,GO:0099512,GO:0099513,GO:0099515,GO:0099518,GO:0099536,GO:0099537,GO:0099568,GO:0099640,GO:0099738,GO:0106027,GO:0110009,GO:0110053,GO:0120025,GO:0120031,GO:0120035,GO:0120036,GO:0120038,GO:0120039,GO:0120104,GO:0120117,GO:0140027,GO:0140029,GO:0140056,GO:0150034,GO:1900006,GO:1900076,GO:1900078,GO:1901019,GO:1901265,GO:1901360,GO:1901362,GO:1901363,GO:1901576,GO:1901615,GO:1901617,GO:1901652,GO:1901653,GO:1901698,GO:1901699,GO:1901700,GO:1901701,GO:1901981,GO:1902407,GO:1902410,GO:1902531,GO:1902716,GO:1902850,GO:1902875,GO:1902877,GO:1902903,GO:1902904,GO:1902936,GO:1903047,GO:1903076,GO:1903078,GO:1903119,GO:1903169,GO:1903260,GO:1903429,GO:1903431,GO:1903475,GO:1903478,GO:1903479,GO:1903530,GO:1903532,GO:1903541,GO:1903543,GO:1903827,GO:1903829,GO:1904062,GO:1904375,GO:1904377,GO:1904580,GO:1904582,GO:1904601,GO:1904752,GO:1904754,GO:1905392,GO:1905429,GO:1905430,GO:1905475,GO:1905477,GO:1905879,GO:1905881,GO:1990151,GO:1990753,GO:1990778,GO:1990819,GO:1990896,GO:1990904,GO:2000026,GO:2000145,GO:2000147,GO:2000241,GO:2000243,GO:2000689,GO:2000769,GO:2001257
Exons6
EggNOG free text desc.Myosin. Large ATPases.
EggNOG OGs3Q93Z@4776,COG0666@1,COG5022@1,KOG0160@2759,KOG4177@2759
Cds size822
COG Functional cat.Z
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko01009,ko03019,ko03029,ko03036,ko04131,ko04147,ko04812
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7281.15476.1prot_E_fasciculatus_S2_contig7281.15476.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7281 347..4113 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842392.7020538-UTR-E_fasciculatus_S2_contig7281:241..3461696842392.7020538-UTR-E_fasciculatus_S2_contig7281:241..346Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7281 242..346 +
1696842392.7824907-UTR-E_fasciculatus_S2_contig7281:4113..41301696842392.7824907-UTR-E_fasciculatus_S2_contig7281:4113..4130Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7281 4114..4130 +
1696842392.7915428-UTR-E_fasciculatus_S2_contig7281:4549..50351696842392.7915428-UTR-E_fasciculatus_S2_contig7281:4549..5035Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7281 4550..5035 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842392.7216713-CDS-E_fasciculatus_S2_contig7281:346..4031696842392.7216713-CDS-E_fasciculatus_S2_contig7281:346..403Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7281 347..403 +
1696842392.7391217-CDS-E_fasciculatus_S2_contig7281:1009..11561696842392.7391217-CDS-E_fasciculatus_S2_contig7281:1009..1156Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7281 1010..1156 +
1696842392.750177-CDS-E_fasciculatus_S2_contig7281:2450..26121696842392.750177-CDS-E_fasciculatus_S2_contig7281:2450..2612Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7281 2451..2612 +
1696842392.7605088-CDS-E_fasciculatus_S2_contig7281:3156..33581696842392.7605088-CDS-E_fasciculatus_S2_contig7281:3156..3358Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7281 3157..3358 +
1696842392.7709553-CDS-E_fasciculatus_S2_contig7281:3859..41131696842392.7709553-CDS-E_fasciculatus_S2_contig7281:3859..4113Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7281 3860..4113 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7281.15476.1

>prot_E_fasciculatus_S2_contig7281.15476.1 ID=prot_E_fasciculatus_S2_contig7281.15476.1|Name=mRNA_E_fasciculatus_S2_contig7281.15476.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=274bp
MRGAPQSALGAAARGGFQTICKMLLENGSDKDQPNGMGWTPLHEACYFNH
LDTVQLLLVHGADPTIKNVQGAMPYNMTSFQPIRNLLREIGGEEAAKTMP
TPTFSVCVNEQGQMFVRVTAGEADKEEAKAGGEGRGSAGGTAAKKSSSPS
RSRSPQGRAGSGGGGGPDSGEVLHKGPMLGELPALGRPPVSSSSGGASSP
TAYDCKRDSEERRNDDAGVGGRGGGGEGTERGEPRGTRPPEILTRWACPG
RRTRGRRRRRSSASSRSGWRGTP*
back to top

mRNA from alignment at E_fasciculatus_S2_contig7281:242..5035+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7281.15476.1 ID=mRNA_E_fasciculatus_S2_contig7281.15476.1|Name=mRNA_E_fasciculatus_S2_contig7281.15476.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4794bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7281:242..5035+ (Ectocarpus fasciculatus EfasUO2)
GAAGTTTGCCATCGCGGCTTTACGGCAATCGCCCCGCTGTTGGTGAGGGC
GGGGGCGGACGCGGCCCACATCCCCGACGCCAAGGCTTCTTGCGGCGCAC
ACATCATGCGGGGGGCTCCGCAGTCTGCCCTGGGAGCGGCGGCCCGCGGG
GGGTTTCAAACGGTGACAGCTAGAACAAGTACTACCCAGACATGCGCTTC
TGTCAAACGGTGACAGCTACTACTGTAGCACTACAGAACAAGTCCACTAA
CCAGACATATTCTTCAGTCAAACGGTGACAGCTAGCACTACAGAGTTGTA
CTATTCAGACGAAAAACACTAAAGAACGGCAACGGTACGAACAATGAGCA
TTGCTCTTGCCTTCTTCTCCCGAGAACATGAAAAAAAAACGAAGTGTTGG
TTGTCTTTCATGCACGGCTTCAAGGAGGTCTTCAATTCTCGGTTTTGGGG
GAAGGCATGGATGAAACGAGACTGACATGAAGCCGGATGGACAAAGCAGC
TATTCAACATTCGCGAAAATACTTCTTCCTGATGGTAATACAGTAGTAAA
ACCGAAGGGAGGCGAGGGGATGGAACAACATCGCCATACACCTTGAAAGT
AGTGTGGATCTTCTCCACGACAAGAACTGACACAACAACCAACAACAACA
ATAACAACAACAACAACAACAACAACAACAACAACAACAACAACAACAAC
AACCCTTAACGTGCCGCCTCCAACCTTTGGGCGACACCAAACAACAACCT
CCAACATGACAACGTCAGATCTGCAAGATGCTTCTGGAGAACGGGAGCGA
CAAGGACCAACCGAACGGCATGGGGTGGACGCCGCTCCACGAGGCGTGCT
ACTTCAACCACCTTGACACCGTGCAGCTGCTCCTGGTGCACGGCGCTGAC
CCTACGATAAAGAACGTGAGGAGACAAGAGTTGGTTGCACGCTACGCCAT
TTGGAGATGGAAGCCTGCGATCGGGGGCACGTTGCCACGGGATATATAGC
CTTAAAAGTAGTATCTGTGTGGTCGCACAGCAGTAAATCCGCATGGCACT
GTGAAAGGAGATAAGCAGCGAGGACATGTGAGTACGTGCACTTCTGAAAC
GCTCCCAGAAGGAGCTCACACAACAAATGGGTGTGGTCCGTCGGATGTAT
GTTTGTGTGCGTTTCTCTTAGGACGGTTGAGACCAAACCGTTGGTAGTTG
GTGTCTCACAGAAAAGAATGGACCAAGCATATCATAGGAAACGACACAAC
TCGAAGGCCTCTCCCGACGCTGAAGCAGAACGGCGGCCAGGACAACTCCG
CCGCCGGACGTTTCACCCCACCCCATGTTTCCTAACTCCTCGACATGCTG
CCTGCCTGCGCAGATAGCCTGGTCTGAGGTACCAGGCTGTCATTACAGAA
CACGCCTGTTTCCTTCTGAGCGAATACCTCTGTCTTCCCGAAACACATGG
CTCCCGTAAGACGTCCGACCGTTCTTCTACGCCCCCATAGACTACGTACG
ACGCCGAGCACTGCATCAAACGTGACATATACCATCTACCATCGTGATCT
TCATGCGACCTTCAGTAGCCATCACCACCACGGCGACGGCTGCTGCTGGG
GTGCTTGTTTTTTCTGTCCCTGCACTACTGTATAATAGTGGCGGTGGCGG
TGATACGGCGCCGCTGCTGTCGTAGCCGCGGCGTCTCGTTGTGGTGCACC
TCGCACTCACTCAGCGACCACGTAGTAGCCCCCAGACCCACCTGTGCGTT
GTAGGAAGGTTGCTATTTGGCCATCGGTGACCGCCGGTCCTGTGGTGACA
ATCCTCCGTTCTCTCGAGGACGCGTGGTCAATGGTCCAACGACTAAGTCA
TGTAAAACATGGGAGTACGCTTCCCCCCCGGTGATGTATCTGGTTTTGCA
TCGAAAATGCAAGTATGATGACCAGCTTCTGGTCCATCCTTCTTGTGAAA
CGTAGCCTGGGCCGGCGAAAACCCGGGTGGTATCGCTCAGTCTCAGCATT
GGTCTACCGCCAAACGACCACGGCATGCGTTTGTAGGAGTACTGTAGATA
CCACCCCGCCCCCCTCCGACCTCGCTGCGGCTCTCATCACAAGGAGAACC
CGCCGGATCGAAACCGGTCGTGTCCATCTTTCCTGCGGCACCCCAAAAAG
GTAGCCTTCGACCCCCAAACCACACCAAAACGCGCCTGGCGTATCAACCC
AAACAACAGGTCCAGGGGGCTATGCCGTACAACATGACGAGCTTCCAGCC
GATCCGGAACCTGCTGCGGGAGATCGGGGGCGAGGAGGCCGCCAAGACGA
TGCCGACCCCAACCTTCTCCGTGTGCGTCAACGAGCAGGGGCAGATGTTC
GTCCGCGTCACGGCCGGCGAGGTGAAATGGCCTACACTTCGGGCTTTTGA
CGAAACCGTCGTCGTCGTCGTCTTCATCATCGTTGCCGTCGCCGTCTGTT
CGCTCGTGTTATCGCTTGTTGTCATGTTTCGTGCTCGGACGTCGTCCTCG
ACCTCTGCCCTTTGTTTGTTGAGTCTTTCCTGGCCGATCTGTTTGAGGAC
CTTGGCGTCTTGACCCCCCATTGCAAACAGAGCACACAAGATGTGAGCGT
TTCCCACCCTTTAGAGCATCATGACCCCGAGTGGACCCTGTGTTGGCATC
GCGCAACAAGACAACAAAAAAAATAAGTAATCCGCCTATAGCCCTACATC
CGAACCCCGAAGTGGTTGATCTATGAACATGCAGCGACGTACATACTGCG
GTAGTTTTTCGACGTGTCTCAATCGTGTGAAGTCGGCATGGTTCCAAACC
GGGAAAAAAGCTGGAAAGCATGAATATTCTGCAACTTCACAAATCATTGA
CAGCGCTCTTCGTTCCGAAATATTTTCCGGGTGATGATGATGATGGTGAT
CGGCTTGACATACAGGCGGACAAGGAAGAGGCCAAGGCCGGGGGGGAAGG
GAGGGGGTCGGCGGGCGGGACGGCGGCGAAGAAGTCGTCCTCCCCGTCCA
GGTCGCGGAGCCCCCAGGGCCGGGCCGGCAGCGGCGGTGGCGGTGGTCCC
GACAGTGGCGAGGTGCTGCACAAGGGGCCGATGCTGGGCGAACTTCCTGC
GCTAGGGAGGCCACCGGGTGCGTCCATGGACGGGGGGGGGGGGGGGGCAG
GAACAACAGGCTGTGTTGTGTTTTTTAGGGGGGGGAGTGTACTCATAGCC
GTGCACCGTAGTCGTTATTTAGACAATTGACCTCGCATCCCTACAAAACC
GGGACGGAGCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCAAG
CGCGAAGTGCCTTGGGGTTGGGGGGGGGTTATGTAGGAGGTTCAGCATCC
GAAGGGAGACAGAGCCGGTGTCGTCGTCACCTTGCAGGTTTTGAGTTTTG
AGGCGTGGTGGAGAGAGCAACCGCAAAAGTGGCTACGTACGATCTCAGCC
TGCCTGAATCTTCATCGATGTCTTTTCTGTGGCCATACCATCGCGAGTGT
GGGGTGGCAAACCATCCGCGACAGGGGTGATAACCAAGTTCGACGCCGCC
CCCACCCCCCGCAGAGCTCGTCCATATTTCCTCCGCTCCGCCGATCCCCC
TCTTTCGCGATCGATCAGTCTCAAGTAGCAGCGGAGGTGCTTCTTCGCCG
ACGGCCTACGACTGCAAGCGCGACAGCGAGGAACGAAGAAACGACGACGC
GGGAGTTGGAGGAAGAGGAGGGGGGGGGGAGGGGACGGAGCGGGGGGAGC
CCCGGGGCACGAGGCCTCCAGAGATTCTAACTCGTTGGGCATGCCCGGGG
AGACGGACGAGGGGCAGGCGCCGGAGGCGATCATCTGCCAGCTCTCGAAG
CGGGTGGCGAGGGACCCCGTGAGGACTCCCTACGGACACGTGAGCGAGAT
TCTTATATATTGTCTGTATCCCCTTGCAAAATATGACGCGGCTCTTGAGA
AGCTCGCCGCTCCCGGATGGCCGTAATCCTGGCAACGTCGTGTCAGGACC
TATTGCGCATGGCCCCCGTGACAAGACGCTCTAGTCAACTAGATGCACGT
GGGTCTCGATTTCTTGGATTGGAGTATAGTGGTGGTGTTGCTGAGAGTTT
TCGCTACCTCAAAGCCGCCGGACCTATATATTGGGAGATGTTTGTTCGAC
GCCGTACAAGCACGTTTCACAAAAAAGGATCCTCTCCCCTCTCTCTCTCC
GTCTCTTCGTCCTTTCCGTTCAACGGAAAAACGTTCGGCGCCGCCCGCTT
ATCACTAACGGGGCATCTCCCTCCTCTCTCTCCCTATTTTTACTCCCAAC
GGACATAGCTGTTCGATCGGCAGATGATAGGGCTGTGGCTCTCCAAGCAG
GGGAGCATCTGCCCACTGACGGGGCAGCCGCTCGTGGAGGCCGAGCTCAA
GCCCGACGCCAAGGCCAAGGCCGAAGCGAAGGCGTGGAACGACGGCCTCC
TCGCCCAGAAGAAGCACTCGGCTACTGCTTCCTCGGCGGGACGCGGGGGC
TCTTCTAGCGCCGCCGGCGCCGGCGCCGGCGCCAACAGAAGCAAAACATC
GGGAGACAGGGCACGGCAGGGGGAAATGGCGAAGGAATCGTCGACGGCGC
GTGGGAAGGCGGACCCCGCGGCGGCGGTAGGTGCCGAGGGGCGCAGCAGC
GGCGGCGGCGGCGGCGGCGGCGGCGAGAGGAACGGTGCCGACCTCGAGAC
AGCCGCGCCGGCAAAAGGCGCGGGCGCCGCCGCCGGCAAAGAGCGCCGTG
GGAGCAAGGAGGCCGAGAACAACGGCGACGACATCTACGACTTC
back to top

Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7281:242..5035+

>mRNA_E_fasciculatus_S2_contig7281.15476.1 ID=mRNA_E_fasciculatus_S2_contig7281.15476.1|Name=mRNA_E_fasciculatus_S2_contig7281.15476.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=822bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7281:242..5035+ (Ectocarpus fasciculatus EfasUO2)
ATGCGGGGGGCTCCGCAGTCTGCCCTGGGAGCGGCGGCCCGCGGGGGGTT
TCAAACGATCTGCAAGATGCTTCTGGAGAACGGGAGCGACAAGGACCAAC
CGAACGGCATGGGGTGGACGCCGCTCCACGAGGCGTGCTACTTCAACCAC
CTTGACACCGTGCAGCTGCTCCTGGTGCACGGCGCTGACCCTACGATAAA
GAACGTCCAGGGGGCTATGCCGTACAACATGACGAGCTTCCAGCCGATCC
GGAACCTGCTGCGGGAGATCGGGGGCGAGGAGGCCGCCAAGACGATGCCG
ACCCCAACCTTCTCCGTGTGCGTCAACGAGCAGGGGCAGATGTTCGTCCG
CGTCACGGCCGGCGAGGCGGACAAGGAAGAGGCCAAGGCCGGGGGGGAAG
GGAGGGGGTCGGCGGGCGGGACGGCGGCGAAGAAGTCGTCCTCCCCGTCC
AGGTCGCGGAGCCCCCAGGGCCGGGCCGGCAGCGGCGGTGGCGGTGGTCC
CGACAGTGGCGAGGTGCTGCACAAGGGGCCGATGCTGGGCGAACTTCCTG
CGCTAGGGAGGCCACCGGTCTCAAGTAGCAGCGGAGGTGCTTCTTCGCCG
ACGGCCTACGACTGCAAGCGCGACAGCGAGGAACGAAGAAACGACGACGC
GGGAGTTGGAGGAAGAGGAGGGGGGGGGGAGGGGACGGAGCGGGGGGAGC
CCCGGGGCACGAGGCCTCCAGAGATTCTAACTCGTTGGGCATGCCCGGGG
AGACGGACGAGGGGCAGGCGCCGGAGGCGATCATCTGCCAGCTCTCGAAG
CGGGTGGCGAGGGACCCCGTGA
back to top