mRNA_E_fasciculatus_S2_contig7277.15470.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM41_ECTSI) HSP 1 Score: 368 bits (944), Expect = 1.050e-120 Identity = 191/210 (90.95%), Postives = 200/210 (95.24%), Query Frame = 3
Query: 33 MTAVAVQPARVLHVLALLALGAGRALAFLGAASPNSALRRRDGGAVATLVRPSHVPNCSQPGGGVADALPPQRPPSTTEREEEMLPAQSKGSATVAWVQLMLDSFEDTFGRGIIDGLDREKLSPEEQEREVDRSGVPIVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVREVDENVPPPQDYAGV 662
MTAVAV+PARVL VLALLALGAGRALAFLGAA PNSALRRRDGGA+ LVRPS+VPNC Q GGVADALP QRPPSTTEREE+MLPAQSKGSATVAWVQLMLDSFEDTFGRGIIDGLDRE+LSPEEQERE+DRS VPIVSHDFLRNAEDP+FIYGNAASLRTFGYTWEEFT LPSRKSCEENLRGEREELLT+VREVDENVPPPQ+YAGV
Sbjct: 1 MTAVAVKPARVLPVLALLALGAGRALAFLGAACPNSALRRRDGGAITPLVRPSNVPNC-QSAGGVADALPSQRPPSTTEREEDMLPAQSKGSATVAWVQLMLDSFEDTFGRGIIDGLDRERLSPEEQEREIDRSDVPIVSHDFLRNAEDPIFIYGNAASLRTFGYTWEEFTTLPSRKSCEENLRGEREELLTIVREVDENVPPPQNYAGV 209
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM40_ECTSI) HSP 1 Score: 115 bits (288), Expect = 2.990e-25 Identity = 64/95 (67.37%), Postives = 75/95 (78.95%), Query Frame = -2
Query: 894 VSSLSKCFLNKAIFEYIVESSRAKKKRLEAHSRLHA-AIPNLRPAMHLVSSLRDLREAKINRVAVDDHDEQKSAIDSGTAIS-ISVTPLSNRSPR 1172
VSSLSKCFLNKAIFEY+VES+RAKK R++ SRLH +P LRPA+HL+SSLR +REA N++ V+DHDEQK DSGTAIS I TP S SPR
Sbjct: 167 VSSLSKCFLNKAIFEYMVESARAKKYRVDVRSRLHTPGLPALRPAVHLLSSLRSVREANTNKIFVNDHDEQKPTTDSGTAISMIPPTPASKMSPR 261
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KG93_9PHAE) HSP 1 Score: 108 bits (269), Expect = 1.310e-23 Identity = 60/95 (63.16%), Postives = 72/95 (75.79%), Query Frame = -2
Query: 894 VSSLSKCFLNKAIFEYIVESSRAKKKRLEAHSRLHAAIP-NLRPAMHLVSSLRDLREAKINRVAVDDHDEQKSAIDSGTAIS-ISVTPLSNRSPR 1172
VSSLSKCFLNKAIFEY+VES+RAKK R++ SRLHAA P LRPA+ L+SSLR +RE K N++ + + DE K IDSG IS I +TP S SPR
Sbjct: 81 VSSLSKCFLNKAIFEYMVESARAKKYRIDVQSRLHAAAPPTLRPALRLLSSLRSVREGKTNKIFIHEQDEHKPTIDSGNTISMIPLTPASKMSPR 175
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain-containing protein n=1 Tax=Novosphingobium sp. PC22D TaxID=1962403 RepID=A0A2A8HQ63_9SPHN) HSP 1 Score: 87.4 bits (215), Expect = 1.270e-16 Identity = 51/111 (45.95%), Postives = 66/111 (59.46%), Query Frame = 3
Query: 444 IVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVRE---VDENVPPPQDYAGVRVTKTGESFRMSAA-VWNVKDAEGRLVGQAARLKV 764
+V+H + DP+F +GN +L FGY+ EEF LPSR S E LR ER +L V E +D DYAG R+T++GE F +S A VWN+ D GR+ GQAAR V
Sbjct: 49 LVAHG---DETDPLFFFGNRVALERFGYSVEEFIGLPSRLSAEAPLRDERRRMLERVAERGYID-------DYAGTRITRSGERFEISRALVWNLVDEAGRMHGQAARFAV 149
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain-containing protein n=3 Tax=Burkholderia cepacia complex TaxID=87882 RepID=A0A0U3TZP9_BURCE) HSP 1 Score: 86.3 bits (212), Expect = 3.750e-16 Identity = 54/146 (36.99%), Postives = 83/146 (56.85%), Query Frame = 3
Query: 318 AWVQLMLDSFEDTFGRGIIDGLDREKLSPEEQEREV-DRSGVPIVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVREVDENVPPPQDYAGVRVTKTGESFRMS-AAVWNVKDAEGRLVGQA 749
A+ QL+ DS+ G ++ E + +E + +R+ +++H+ DP+FIYGN A+ R FGY+W+E T LPSR S E R ER++ L V+ + Y GVRVTK+G+ F + A +W + DA+G+L GQA
Sbjct: 12 AFYQLLADSYTRLLGLPLVP----EAMPADEATAWLYERAPFAVLAHN---TDSDPLFIYGNRAAQRRFGYSWDEITRLPSRLSAEAPNREERQQFLARVQRLGYET----GYKGVRVTKSGQRFIIEEATLWQLLDADGKLHGQA 146
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain-containing protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A2D8SUB1_9PLAN) HSP 1 Score: 86.3 bits (212), Expect = 4.050e-16 Identity = 62/152 (40.79%), Postives = 83/152 (54.61%), Query Frame = 3
Query: 315 VAWVQLMLDSFEDTFGRGII--DGLDREKLSPEEQEREVDRSGVPIVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVRE---VDENVPPPQDYAGVRVTKTGESFRMSAAV-WNVKDAEGRLVGQAA 752
V ++L+L SF GR ++ DG S EE+ R + + +VSH L N DP+ YGN +L + TWEEF PSRK+ E R ER LL R+ +D DYAG+RV+KTG+ F++ AV WN+ D GR GQAA
Sbjct: 5 VQHIELLLHSFSSLLGRELLVHDG------SHEERVRCLFDAPFVVVSHG-LEN--DPILNYGNKKALCLWEMTWEEFVRTPSRKTAEPVHRDERARLLDRTRKNGYID-------DYAGIRVSKTGKRFKIEKAVIWNISDENGRYYGQAA 140
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain-containing protein n=2 Tax=Paraburkholderia sediminicola TaxID=458836 RepID=A0A6J5A1U8_9BURK) HSP 1 Score: 86.7 bits (213), Expect = 4.330e-16 Identity = 52/147 (35.37%), Postives = 82/147 (55.78%), Query Frame = 3
Query: 318 AWVQLMLDSFEDTFGRGIIDGLDREKLSPEEQERE--VDRSGVPIVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVREVDENVPPPQDYAGVRVTKTGESFRMS-AAVWNVKDAEGRLVGQA 749
A+ QL+ DS+ GR ++ ++ P + E + + +++H+ DP+FIYGN A+ R FGY+W+E T LPSR S E R ER++ L V+ + Y GVR+TK+G+ F + A +W + D +G+L GQA
Sbjct: 30 AFYQLLADSYARLLGRPLV-----QQAMPVTEATEWLYEHAPFAVLAHN---TDPDPLFIYGNKAAQRRFGYSWDEITRLPSRLSAEAPNREERQQFLARVQRLGYEA----GYKGVRITKSGQRFMIEEATLWQLLDTDGKLHGQA 164
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain protein n=9 Tax=Paraburkholderia TaxID=1822464 RepID=D5WJH2_PARAM) HSP 1 Score: 85.1 bits (209), Expect = 8.780e-16 Identity = 54/145 (37.24%), Postives = 80/145 (55.17%), Query Frame = 3
Query: 318 AWVQLMLDSFEDTFGRGIIDGLDREKLSPEEQEREVDRSGVPIVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVREVDENVPPPQDYAGVRVTKTGESFRMS-AAVWNVKDAEGRLVGQA 749
++ QL+ DS+ G+ ++ + E E + + +++H+ DP+FIYGN A+ R FGY+W E T LPSR S E R ER++ L V+ + DY GVRVTK+GE F + A +W + DA+G L GQA
Sbjct: 9 SFYQLLSDSYARLVGQRLVPHV---MPVAEATEWLYESAPFAVLAHN---TDPDPVFIYGNKAAQRRFGYSWSEITTLPSRLSAEAPNREERQQFLERVQRLGYET----DYKGVRVTKSGERFIIEQATLWQLLDADGTLHGQA 143
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain-containing protein n=2 Tax=Nitrospiraceae TaxID=189779 RepID=A0A525WAL2_9BACT) HSP 1 Score: 85.9 bits (211), Expect = 9.740e-16 Identity = 58/147 (39.46%), Postives = 76/147 (51.70%), Query Frame = 3
Query: 315 VAWVQLMLDSFEDTFGRGIIDGLDREKLSPEEQEREVDRSGVPIVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVREVDENVPPPQDYAGVRVTKTGESFRM-SAAVWNVKDAEGRLVGQAA 752
V W QL+L+S+ GR +++ P Q + S +VSH EDP+ YGN A+L + TWE+ T PSR + E R ERE +L R Y GVRVT TG F + +A +WNV DAEG+ VGQAA
Sbjct: 37 VDWSQLLLNSYSHWIGRELLERAG----DPAYQAHALFLSPFIVVSHGM---EEDPLINYGNQAALELWEMTWEDLTRTPSRLTAEPVNRAEREWMLEQAR----TRGYLDTYQGVRVTSTGRRFLVENAIIWNVVDAEGQRVGQAA 172
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Match: MEKHLA (domain-containing protein n=1 Tax=Xanthomonas maliensis TaxID=1321368 RepID=UPI000399B3BD) HSP 1 Score: 84.3 bits (207), Expect = 1.400e-15 Identity = 48/104 (46.15%), Postives = 63/104 (60.58%), Query Frame = 3
Query: 444 IVSHDFLRNAEDPMFIYGNAASLRTFGYTWEEFTALPSRKSCEENLRGEREELLTVVREVDENVPPPQDYAGVRVTKTGESFRMS-AAVWNVKDAEGRLVGQAA 752
+++HD A DP+FIY N + R FGY WE F A+PSR+S E + ER+ LL V D V + YAGVR+ K G F ++ VW + DA+GRL GQAA
Sbjct: 44 LLAHD---TAADPLFIYANLTAQRLFGYDWEAFMAMPSRRSAERPEQAERQRLLAAVAR-DGYV---KHYAGVRIAKDGTRFAITDGVVWQLIDAQGRLHGQAA 140 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7277.15470.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7277.15470.1 >prot_E_fasciculatus_S2_contig7277.15470.1 ID=prot_E_fasciculatus_S2_contig7277.15470.1|Name=mRNA_E_fasciculatus_S2_contig7277.15470.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=247bp MTAVAVQPARVLHVLALLALGAGRALAFLGAASPNSALRRRDGGAVATLVback to top mRNA from alignment at E_fasciculatus_S2_contig7277:1411..5935+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7277.15470.1 ID=mRNA_E_fasciculatus_S2_contig7277.15470.1|Name=mRNA_E_fasciculatus_S2_contig7277.15470.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4525bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7277:1411..5935+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7277:1411..5935+ >mRNA_E_fasciculatus_S2_contig7277.15470.1 ID=mRNA_E_fasciculatus_S2_contig7277.15470.1|Name=mRNA_E_fasciculatus_S2_contig7277.15470.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=741bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7277:1411..5935+ (Ectocarpus fasciculatus EfasUO2)back to top |