mRNA_E_fasciculatus_S2_contig7275.15469.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7275.15469.1
Unique NamemRNA_E_fasciculatus_S2_contig7275.15469.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Vps8 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMF4_9PHAE)

HSP 1 Score: 556 bits (1434), Expect = 2.720e-177
Identity = 343/434 (79.03%), Postives = 347/434 (79.95%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGG-GAGAGRGGARWPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLA---------------------------------------AEST-SPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQKILPAENAAXXXXXXXXXXXXXXXSGP-SARRADGATGGPLHRSGSSRDIRGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGSQQRRPAPRSEAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQ 1176
            PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGG G    RGGARWP LAVVKELSASAPVVAVEWLREQVLAYLD DMELCVLDTRAGTELEHASLSTL ++                                       AEST        PGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQKILPAENAA XXXXXXXXXXXXXX    SA RADGATGGPLHRSGSSRDIRG  GRMAA+FGGE LKSSS      WP         RRP PRSEAAEHISDLLAQYLRLAMNNAP A+SSSLHST A    XXXXXXX SPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQ
Sbjct:  693 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGAGXXXXRGGARWPGLAVVKELSASAPVVAVEWLREQVLAYLDTDMELCVLDTRAGTELEHASLSTLSVSISPILPXXXXXXXXXXXXXXXXXXXXXXGTQAAGTRSGPAESTLXXXXXXXPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQKILPAENAAAXXXXXXXXXXXXXXXXXASAHRADGATGGPLHRSGSSRDIRGVAGRMAANFGGEMLKSSSXXXXXXWPXXXXXXXXXRRPTPRSEAAEHISDLLAQYLRLAMNNAPGADSSSLHSTAAXXXXXXXXXXXGSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQ 1126
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Vps8 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRX0_ECTSI)

HSP 1 Score: 257 bits (656), Expect = 1.090e-72
Identity = 191/397 (48.11%), Postives = 192/397 (48.36%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGG-GAGAGRGGARWPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQKILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLHRSGSSRDIRGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGSQQRRPAPRSEAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXX----SPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQ 1176
            PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGG G    RGGARWP LAVVKELSASAPVVAVEWLREQ                                                                                                                                                                                           RRPAPRSEAAEHISDLLAQYLRLAMNNAPAA+SSS HS       XXXXXXXX    SPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQ
Sbjct:  703 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGAGXXXXRGGARWPGLAVVKELSASAPVVAVEWLREQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------RRPAPRSEAAEHISDLLAQYLRLAMNNAPAADSSSRHSXXXXXXXXXXXXXXXXXAGSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQ 912
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Chromo (domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WX84_9STRA)

HSP 1 Score: 187 bits (474), Expect = 1.780e-48
Identity = 148/407 (36.36%), Postives = 211/407 (51.84%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGAR--WPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQ-KILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDIRGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGSQQRRPAPRS----------EAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFI 1164
            P ++RA AP   +LARGWGN +Q L    V  GG+      G   AR  +P+     ++  S+ V+AV+WL +QV+ YL++  E+CV D  +  ELE   +S+L L   S          ++ N+FR C   LYLLG +EL+  RVQ W+QR++SLV  GEWLEALA+ALDH+E  KI  A+ A                     ++ D      LH      R+G   D+             E ++     G  P+P       ++     RS            AE ++DLL +Y+RLA+ NAP        ST AA G+        S  G +++LA SH+QMLAGVC E+CA+ GR D+LFG+IF  F+  G+ GVF++ LEPY+L  KL++LSP  +  F+
Sbjct:  715 PGSSRALAP---VLARGWGNRVQFLEV--VFPGGK------GHTHARHGFPTFDEHDQIECSSDVMAVQWLGDQVVVYLNSHDEICVYDVMSRQELEMVDVSSLELVFASYRGKNAR---SFSNSFRGCYNILYLLGLKELQTARVQPWTQRIDSLVDEGEWLEALALALDHYEGLKIAAADRATRDRFPPVFFRD---------KQNDQCLVDILHMCQTNQRTGEKEDV------FRHEESAEEVRWVC--GEVPYPSDIAKKLEETLQKARSGEVTKNFVPISVAERVADLLMEYVRLAIANAPG-------STSAATGELGL-----SKIGMKLDLAKSHYQMLAGVCIEYCALIGRTDLLFGEIFTRFKEAGKLGVFVELLEPYILSEKLRSLSPVAMQEFV 1078
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FDH6_PYTOL)

HSP 1 Score: 186 bits (471), Expect = 4.310e-48
Identity = 137/397 (34.51%), Postives = 211/397 (53.15%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGARWPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQ-KILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDI--RGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGSQQRRPAPRSEAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFI 1164
            P ++RA AP   +LARGWG  +Q L           GG         WP+     ++ +S+  +A++WL +QV+ YL++  E+CV D  +  ELE   +S+L L   S          ++ N+FR C+  LYLLG +EL+  RVQ W+QR+++LV+ G+WLEALA+ALDH+E  K+  A+ A                     R+ D      LH      R+G   D+     G  +    G +      S  +      A  G   +   P S  AE ++DLL +Y+RLA+ NAP++ +++  S+G +  K             +++LA SH+QMLAGVC EFCA+  R D+LFG+IF+ F+  G+  +F++ LEPY+L  +L++LSPEV+ AF+
Sbjct:  427 PGSSRALAP---VLARGWGKHVQFLEVVFP------GGQNHSHSKHGWPTFEEHDQIESSSDTMAIQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR---SFSNSFRGCDNILYLLGLKELQTARVQPWTQRIDTLVEEGQWLEALALALDHYEGLKVAAADRAVRDRFPPVFFRD---------RQNDQCLVDLLHMCQTNQRTGEKEDVFRHEDGDEVRWRCGEDPYPIEISKKLEETYQKARSGQVTKNFVPIS-VAERVADLLMEYVRLAIANAPSSTATTT-SSGPSWAKNNL----------KLDLAKSHYQMLAGVCIEFCAIINRTDLLFGEIFKRFKDAGKTDIFVELLEPYILADRLRSLSPEVMQAFV 790
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Vps8 (domain-containing protein n=22 Tax=Peronosporaceae TaxID=4777 RepID=A0A3F2RY97_9STRA)

HSP 1 Score: 178 bits (452), Expect = 1.400e-45
Identity = 142/408 (34.80%), Postives = 202/408 (49.51%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGARWPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQ-KILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDIRGGGGRMAASFGGEALKSSSSHGVG--PWPGAAGVGSQQRRPAPRS----------EAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFID 1167
            P ++RA AP   +LARGWGN +Q L           GG     G   +P+     ++ +S+ V+AV+WL +QV+ YL++  E+CV D  +  ELE   +S+L L   S          ++ N+FR C   LYLLG +EL+  RV  W+QR++ LV  GEWLEALA+ALDHFE  K+  A+ AA                    ++ D      LH      R+G   D+          F  E          G  P+P       ++     RS            AE ++DLL +Y+RLA+ NAP        ST A +G+           G +++LA SH+QMLAGVC EFCA+ GR D+LFG+IF  F+   +  VF++ LEPY+L  KL+ LSP  +  F+ 
Sbjct:  406 PGSSRALAP---VLARGWGNRVQFLEVVFP------GGKNHSHGRHGFPTFDEHDQIESSSAVMAVQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR---SFSNSFRGCYNILYLLGLKELQTARVLPWTQRIDLLVDDGEWLEALALALDHFEGLKVAAADRAARDRFPPVFFRD---------KQNDQCLVDILHMCQTNQRTGEKEDV----------FRHEESADEVRWVCGEVPYPPDIAKKLEETLQKARSGEVTKNFVPISVAERVADLLMEYVRLAIANAPG-------STAATSGELGLNKI-----GMKLDLAKSHYQMLAGVCIEFCALIGRTDLLFGEIFTRFKEANKLSVFVELLEPYILSEKLRNLSPVAMQEFVQ 770
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Vps8 (domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GT40_PHYRM)

HSP 1 Score: 176 bits (445), Expect = 1.240e-44
Identity = 141/407 (34.64%), Postives = 202/407 (49.63%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGARWPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQ-KILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDIRGGGGRMAASFGGEALKSSSSHGVG--PWPGAAGVGSQQRRPAPRS----------EAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFI 1164
            P ++RA AP   +LARGWGN +Q L           GG     G   +P+     ++ +S+ V+AV+WL +QV+ YL++  E+CV D  +  ELE   +S+L L   S          ++ N+FR C   LYLLG +EL+  RV  W+QR++ LV  GEWLEALA+ALDH+E  KI  A+ AA                    ++ D      LH      R+G   D+          F  E          G  P+P       ++     RS            AE ++DLL +Y+RLA+ NAP        ST AA G+           G +++LA SH+QMLAGVC E+CA+ GR D+LFG+I+  F+   +  VF++ LEPY+L  KL+ LSP  +  F+
Sbjct:  406 PGSSRALAP---VLARGWGNRVQFLEVVFP------GGKNHSHGRHGFPTFDEHDQIESSSAVMAVQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR---SFSNSFRGCYNILYLLGLKELQTARVLPWTQRIDLLVDDGEWLEALALALDHYEGLKIAAADRAARDRFPPVFFRD---------KQNDQCLVDILHMCQTNQRTGEKEDV----------FRHEESADEVRWVCGEVPYPPDIAKKLEETLQKARSGEVTKNFVPISVAERVADLLMEYVRLAIANAPG-------STAAAGGELSLNKI-----GMKLDLAKSHYQMLAGVCIEYCALIGRTDLLFGEIYTRFKDANKLSVFVELLEPYILSEKLRNLSPVAMEEFV 769
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Vacuolar (protein sorting-associated protein 8 n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BIS2_PYTIN)

HSP 1 Score: 174 bits (440), Expect = 5.670e-44
Identity = 134/399 (33.58%), Postives = 202/399 (50.63%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGARWPSLAVVK-ELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQKILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDI---RGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGSQQRRPAPRSEAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFID 1167
            P ++RA AP   +LARGWG  +Q L           GG         WP+      ++  ++   A++WL +QV+ YL+   E+CV D  +  ELE   +S L L   S          ++ N+FR C+  LYLLG +EL+  RVQ W+QR+++LV  G+WLEALA+ALDH+E   + A + A                    R  D      LH      R+G   D+         +    G E      +  +      A  G   +   P S  AE ++DLL +Y+RLA+ NAP++ +      G++ G+             +++L+ SH+QMLAGVC E+CA+ GR D+LFG+IF+ F+  G+  VF++ LEPY+L  KL+TLSP+V+ AF+ 
Sbjct:  231 PGSSRALAP---VLARGWGRHVQFLEVVFP------GGQHHSHSKHGWPTFEEHDLQIETASDTTALQWLGDQVIVYLNAHDEICVYDVMSRQELEVVDVSLLELVFASYRGKSNA--RSFANSFRGCDNILYLLGLKELQTARVQPWTQRIDTLVDDGQWLEALALALDHYEGLKVAAVDRAVRDRFPPVFFRD--------RNNDQCLVDLLHMSQTNQRTGEKEDVFRHEDSADEVRWRCGEELYAPDVAQRLEETYQKARSGQVTKNFVPIS-VAERVADLLMEYVRLAIANAPSSSTG-----GSSIGRSQS----------KLDLSKSHYQMLAGVCIEYCAIIGRTDLLFGEIFKRFQDAGKTDVFVELLEPYILSDKLRTLSPDVLEAFVS 594
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Vps8 (domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XX63_9STRA)

HSP 1 Score: 172 bits (435), Expect = 2.470e-43
Identity = 137/405 (33.83%), Postives = 200/405 (49.38%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGARWPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQ-KILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDIRGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGSQQRRPAPRS----------EAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFI 1164
            P ++RA AP   +LARGWG+ +Q L           GG         WP+     +L  +  ++A++WL +QV+ YL+   E+CV D  +  ELE   +S+L L   S          ++ N+FR  +  LYLLG +EL+  RVQ W+QR+++LV  GEWLEALA+ALDH+E  K+  A+ AA                    R+ D      LH      R+G   D+     R   S    A +     G  P+P       ++     RS            AE ++DLL +Y+RLA+ NAP             +G         S  G +++L  SH+QMLAGVC E+CA+ GR D+LFG+IF  F+  G+  VF++ LEPY+L  KL++LSP  +  F+
Sbjct:  446 PGSSRALAP---VLARGWGSYVQFLEVVFP------GGPPHMHARHGWPTFEEHDQLECATDIMAIQWLGDQVVVYLNASDEICVYDVMSRQELEVVDVSSLELVFASYRGKNAR---SFSNSFRGGDNILYLLGLKELQTARVQPWTQRIDTLVDEGEWLEALALALDHYEGLKVAAADRAARDRFPPVFFRD---------RQNDQCLVDILHMCQTNQRTGEKEDVF----RHEES----ADEVRWVCGEEPYPPEIARKLEETLQKARSGQVTKNFVPISVAERVADLLMEYVRLAIANAPXXXXXXXXXXXTFSG--------FSKAGLKLDLTKSHYQMLAGVCIEYCAIIGRTDLLFGEIFTRFKEAGKADVFVELLEPYILSEKLRSLSPLAMQEFV 813
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Glucosidase (2 subunit beta (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y7R6_9STRA)

HSP 1 Score: 171 bits (434), Expect = 3.230e-43
Identity = 142/409 (34.72%), Postives = 204/409 (49.88%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGAR--WPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQ-KILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDIRGGGGRMAASFGGEALKSSSSHGVG--PWPGAAGVGSQQRRPAPRS----------EAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFI 1164
            P ++RA AP   +LARGWGN +Q L    V  GG+          AR  +P+     ++ +S+ V+AV+WL +QV+ YL++  E+CV D  +  ELE   +S+L L   S          ++ N+FR C   LYLLG +EL+  RV  W+QR++ LV  GEWLEALA+ALDH+E  KI  A+ AA                    ++ D      LH      R+G   D+          F  E          G  P+P       ++     RS            AE ++DLL +Y+RLA+ NAP        ST AA G+           G +++LA SH+QMLAGVC E+CA+ GR D+LFG+I+  F+   +  V ++ LEPY+L  KL+ LSP  +  F+
Sbjct: 1006 PGSSRALAP---VLARGWGNRVQFLEV--VFPGGK------NHSHARHGFPTFDEHDQIESSSAVMAVQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR---SFSNSFRGCYNILYLLGLKELQTARVLPWTQRIDLLVDDGEWLEALALALDHYEGLKIAAADRAARDRFPPVFFRD---------KQNDQCLVDILHMCQTNQRTGEKEDV----------FRHEESADEVRWVCGEVPYPPDIAKKLEETLQKARSGEVTKNFVPISVAERVADLLMEYVRLAIANAPG-------STAAAGGELSLNKI-----GMKLDLAKSHYQMLAGVCIEYCALIGRTDLLFGEIYSRFKDANKLSVLVELLEPYILSEKLRNLSPVAMEEFV 1369
[Close]
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Match: Vps8 (domain-containing protein n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A484E0X2_BRELC)

HSP 1 Score: 170 bits (430), Expect = 1.130e-42
Identity = 140/407 (34.40%), Postives = 205/407 (50.37%), Query Frame = 1 
Query:    1 PSAARAQAPPMALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGARWPSLAVVKELSASAPVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTSPPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEWLEALAVALDHFEQ-KILPAENAAXXXXXXXXXXXXXXXSGPSARRADGATGGPLH------RSGSSRDIRGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGS------QQRRPAPRSE------AAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKXXXXXXXXSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQGVFLDTLEPYVLMGKLKTLSPEVISAFI 1164
            P ++RA AP   +LARGWGN +Q L    V  GG+       R G  +P+     ++ +S+ V+A +WL +QV+ YL++  E+CV D  +  ELE   +S+L L   S          ++ N+FR C   LYLLG +EL+  RV  W+QR++ LV  GEWLEALA+ALDH+E  K+  A+ AA                    ++ D      LH      R+G   D+          F  E          G  P    +        Q+ R   R++       AE ++DLL +Y+RLA+ NAP        ST AA G+           G +++LA SH+QMLAGVC E+CA+ GR D+LFG+I+  F+   +  V ++ LEPY+L  KL++LSP  +  F+
Sbjct:  400 PGSSRALAP---VLARGWGNRVQFLEV--VFPGGKN--YSLARHG--FPTFDEHDQIESSSAVMATQWLGDQVVVYLNSHDEICVYDVMSRQELEIVDVSSLELVFASYRGKNAR---SFSNSFRGCYNILYLLGLKELQTARVLPWTQRIDLLVDDGEWLEALALALDHYEGLKMAAADRAARDRFPPVFFRD---------KQNDQCLVDILHMCQTNQRTGEKEDV----------FRHEESAEEVRWVCGEVPYPPDIAKKLEETLQKARSGERTKNFVPISVAERVADLLIEYVRLAIANAPG-------STAAAGGELSLNKI-----GMKLDLAKSHYQMLAGVCIEYCALIGRTDLLFGEIYTRFKDANKLSVLVELLEPYILSEKLRSLSPAAMEEFV 763
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7275.15469.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Vps82.720e-17779.03domain-containing protein n=1 Tax=Ectocarpus sp. C... [more]
Vps81.090e-7248.11domain-containing protein n=1 Tax=Ectocarpus silic... [more]
Chromo1.780e-4836.36domain-containing protein n=2 Tax=Nothophytophthor... [more]
Uncharacterized4.310e-4834.51protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
Vps81.400e-4534.80domain-containing protein n=22 Tax=Peronosporaceae... [more]
Vps81.240e-4434.64domain-containing protein n=1 Tax=Phytophthora ram... [more]
Vacuolar5.670e-4433.58protein sorting-associated protein 8 n=1 Tax=Pythi... [more]
Vps82.470e-4333.83domain-containing protein n=1 Tax=Pythium brassicu... [more]
Glucosidase3.230e-4334.722 subunit beta (Fragment) n=1 Tax=Phytophthora pal... [more]
Vps81.130e-4234.40domain-containing protein n=2 Tax=Peronosporaceae ... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7275contigE_fasciculatus_S2_contig7275:3387..5680 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score244.2
Seed ortholog evalue9.9e-62
Seed eggNOG ortholog2880.D8LRX0
Model size1176
KEGG koko:K20178
KEGG Pathwayko04138,map04138
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0005488,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005768,GO:0005769,GO:0006810,GO:0006886,GO:0006906,GO:0006996,GO:0007034,GO:0008104,GO:0008150,GO:0008270,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016043,GO:0016050,GO:0016192,GO:0031410,GO:0031982,GO:0032991,GO:0033036,GO:0033263,GO:0034058,GO:0034613,GO:0042886,GO:0043167,GO:0043169,GO:0043226,GO:0043227,GO:0043229,GO:0044422,GO:0044424,GO:0044433,GO:0044440,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0045324,GO:0046872,GO:0046907,GO:0046914,GO:0048284,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0061024,GO:0061025,GO:0070727,GO:0071702,GO:0071705,GO:0071840,GO:0090174,GO:0097708,GO:0099023
Exons4
EggNOG free text desc.endosomal vesicle fusion
EggNOG OGsKOG2079@1,KOG2079@2759
Cds size1146
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842391.9493835-UTR-E_fasciculatus_S2_contig7275:3386..34161696842391.9493835-UTR-E_fasciculatus_S2_contig7275:3386..3416Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7275 3387..3416 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842391.9658165-CDS-E_fasciculatus_S2_contig7275:3416..36021696842391.9658165-CDS-E_fasciculatus_S2_contig7275:3416..3602Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7275 3417..3602 +
1696842391.9747338-CDS-E_fasciculatus_S2_contig7275:3996..40851696842391.9747338-CDS-E_fasciculatus_S2_contig7275:3996..4085Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7275 3997..4085 +
1696842391.9849875-CDS-E_fasciculatus_S2_contig7275:4181..49581696842391.9849875-CDS-E_fasciculatus_S2_contig7275:4181..4958Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7275 4182..4958 +
1696842392.002597-CDS-E_fasciculatus_S2_contig7275:5586..56801696842392.002597-CDS-E_fasciculatus_S2_contig7275:5586..5680Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7275 5587..5680 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7275.15469.1prot_E_fasciculatus_S2_contig7275.15469.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7275 3417..5680 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7275.15469.1

>prot_E_fasciculatus_S2_contig7275.15469.1 ID=prot_E_fasciculatus_S2_contig7275.15469.1|Name=mRNA_E_fasciculatus_S2_contig7275.15469.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=382bp
MALLARGWGNSIQILAATRVDAGGRGGGAGAGRGGARWPSLAVVKELSAS
APVVAVEWLREQVLAYLDNDMELCVLDTRAGTELEHASLSTLGLAAESTS
PPPPLPPGTYHNAFRACEGRLYLLGRQELRAVRVQGWSQRVESLVQAGEW
LEALAVALDHFEQKILPAENAAAAAAAAAATQAEGGGSGPSARRADGATG
GPLHRSGSSRDIRGGGGRMAASFGGEALKSSSSHGVGPWPGAAGVGSQQR
RPAPRSEAAEHISDLLAQYLRLAMNNAPAAESSSLHSTGAAAGKAGGGGG
AGSPGGPRINLAHSHFQMLAGVCAEFCAVTGRLDMLFGQIFQAFRARGQQ
GVFLDTLEPYVLMGKLKTLSPEVISAFIDRCQ
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mRNA from alignment at E_fasciculatus_S2_contig7275:3387..5680+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7275.15469.1 ID=mRNA_E_fasciculatus_S2_contig7275.15469.1|Name=mRNA_E_fasciculatus_S2_contig7275.15469.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2294bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7275:3387..5680+ (Ectocarpus fasciculatus EfasUO2)
CCTTCGGCGGCCCGCGCGCAGGCGCCGCCGATGGCGCTGTTGGCGAGGGG
GTGGGGCAACTCCATCCAGATTCTGGCGGCGACGCGCGTGGACGCGGGGG
GGAGGGGGGGGGGGGCGGGGGCGGGGAGAGGGGGAGCGAGGTGGCCCAGT
CTCGCGGTGGTGAAGGAGTTGAGCGCGAGCGCGCCGGTTGTGGCGGTGGA
GTGGCTTCGCGAACAGGTAATAAAAGGGGGCGGGGGAATTCATAGACGGG
GCCCTCTGTCCTGATGATGTGGTTTGTCCGCGGACGAACGTGGCGGTCGA
AATTTTGTTGGAGTTACGGTAGTCTAGGTCGTCGGCGAGGGTTTGGTCCC
TTGGTAGACGAGTCCGTGACAACATATTTTTTTAGCGTGTTCCTTTCCCT
GTGGATGTTTGCTGTTGGTTTGCCACAAAAGCAGTTTTTTTTGTCTGCGT
ATGTGGGGCGAGGACGATATCGTCGCACCCCGGCGTTGTTCACACCCACT
TGACAGTCTTTTCTCTCACCCTCAATCCCTCTGCTGTGTGTGTGTCTTCT
CTCTCTGTATCTCCCTCTCTCTGTCTCTCGCTCTCGCTCGCTCTCTTACC
CCCCCCCTAGGTCCTGGCCTACCTGGATAACGACATGGAGCTGTGCGTGC
TGGACACGCGCGCGGGCACGGAGCTCGAACACGCCAGCCTGTCCACCCTG
TCGGTTTCCATCTCCCCTATCCTTCCACCCCCCCCTTCCTCCTGCTCCCA
GCCGCCGTCTACCGGCGGCGGCACCCAAGCAGCAGGTACTCACAGCGGCC
TTGCCGCTGAATCAACTTCGCCGCCGCCGCCCCTCCCCCCGGGCACGTAC
CACAACGCCTTCCGCGCGTGCGAGGGCCGGCTGTACCTCCTCGGCAGGCA
GGAGCTGAGGGCGGTGAGGGTGCAGGGCTGGTCGCAGAGGGTGGAGTCGC
TCGTGCAGGCCGGGGAGTGGCTGGAAGCCCTCGCCGTGGCGCTCGACCAC
TTCGAGCAGAAGATCCTACCGGCGGAAAACGCCGCCGCCGCCGCCGCGGC
CGCGGCGGCAACGCAGGCGGAGGGGGGGGGGTCCGGCCCTTCCGCCCGCC
GCGCGGACGGGGCCACGGGGGGGCCGTTGCACCGCAGCGGTAGTAGCAGA
GATATCAGGGGGGGTGGGGGACGGATGGCGGCGAGCTTTGGCGGGGAGGC
GTTGAAGAGCAGCAGCAGCCACGGGGTTGGGCCATGGCCAGGGGCGGCGG
GCGTGGGAAGCCAGCAGCGAAGGCCGGCGCCGAGGTCGGAGGCGGCGGAA
CACATCAGCGACCTCCTGGCGCAGTACCTTCGCCTGGCGATGAACAACGC
CCCCGCCGCGGAGTCCTCATCCCTGCATTCGACGGGGGCGGCGGCGGGCA
AGGCGGGGGGCGGGGGGGGGGCGGGGTCCCCCGGCGGGCCGCGGATAAAC
TTGGCGCACAGCCACTTCCAGATGCTCGCCGGGGTGTGCGCGGAGTTCTG
CGCCGTGACCGGGAGGCTGGACATGCTGTTTGGACAGATATTTCAAGCGT
TTCGCGCGCGCGGTCAGCAGGGGTAAGTGATGTGTGTGTGTTTTAATTAT
TGGCATCGACGGCGCTAACCGTGTGTGTGTTTCGGATCATGTTTGTTTGT
TTGAAACGCGACGGAGGTATATCGTGTTTTTAGGGCTTGAGGCCGAGTAC
GTATGTTTGCCTATGGCGCACACTTTGTAACGTTTGACAGATGCGTGTGG
GCCTCTCTCTGCACGCGCGCGCGCGTGTGTGTGTGCATAGTGTCAGCACG
TCGCACGGAAGGCTTATTTTCGTAGTACAGCAGTACACGATTGCATGCCA
AATGACCGCCCCCCGCACACGATAGTCAACTCCGAACAGCTACTGTACTG
TACCGTCACAAATTTGAAAGAAAGTTGCATACAGCAGTACTGTAGATACT
GCAAGTGAGGGCCCCCTGCATCGCTGAATTGTTTTGGCGAAAGTGTCCGA
ACGTCCACAAGGGGGCTCCGACGTATGCGTTGACGTGTGTGTGTGTGTGT
GTGTGTGTGTGTGTGTGTGTTTTTTTCCTGTGGTGACCATTCCCCGCCCG
TGTTCCGATGGTTTGGGCATACGGATTTACATATATTTATTTGTTCCGCT
TCCTCTTGTGTGATGAAATCTCTCGTCGATCACCCCCGTTCGTGTCCCAG
CGTCTTCTTGGACACGCTCGAGCCGTACGTGCTCATGGGCAAGCTCAAGA
CCCTGTCGCCAGAGGTCATCAGCGCGTTCATCGACAGGTGTCAG
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7275:3387..5680+

>mRNA_E_fasciculatus_S2_contig7275.15469.1 ID=mRNA_E_fasciculatus_S2_contig7275.15469.1|Name=mRNA_E_fasciculatus_S2_contig7275.15469.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1146bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7275:3387..5680+ (Ectocarpus fasciculatus EfasUO2)
ATGGCGCTGTTGGCGAGGGGGTGGGGCAACTCCATCCAGATTCTGGCGGC
GACGCGCGTGGACGCGGGGGGGAGGGGGGGGGGGGCGGGGGCGGGGAGAG
GGGGAGCGAGGTGGCCCAGTCTCGCGGTGGTGAAGGAGTTGAGCGCGAGC
GCGCCGGTTGTGGCGGTGGAGTGGCTTCGCGAACAGGTCCTGGCCTACCT
GGATAACGACATGGAGCTGTGCGTGCTGGACACGCGCGCGGGCACGGAGC
TCGAACACGCCAGCCTGTCCACCCTCGGCCTTGCCGCTGAATCAACTTCG
CCGCCGCCGCCCCTCCCCCCGGGCACGTACCACAACGCCTTCCGCGCGTG
CGAGGGCCGGCTGTACCTCCTCGGCAGGCAGGAGCTGAGGGCGGTGAGGG
TGCAGGGCTGGTCGCAGAGGGTGGAGTCGCTCGTGCAGGCCGGGGAGTGG
CTGGAAGCCCTCGCCGTGGCGCTCGACCACTTCGAGCAGAAGATCCTACC
GGCGGAAAACGCCGCCGCCGCCGCCGCGGCCGCGGCGGCAACGCAGGCGG
AGGGGGGGGGGTCCGGCCCTTCCGCCCGCCGCGCGGACGGGGCCACGGGG
GGGCCGTTGCACCGCAGCGGTAGTAGCAGAGATATCAGGGGGGGTGGGGG
ACGGATGGCGGCGAGCTTTGGCGGGGAGGCGTTGAAGAGCAGCAGCAGCC
ACGGGGTTGGGCCATGGCCAGGGGCGGCGGGCGTGGGAAGCCAGCAGCGA
AGGCCGGCGCCGAGGTCGGAGGCGGCGGAACACATCAGCGACCTCCTGGC
GCAGTACCTTCGCCTGGCGATGAACAACGCCCCCGCCGCGGAGTCCTCAT
CCCTGCATTCGACGGGGGCGGCGGCGGGCAAGGCGGGGGGCGGGGGGGGG
GCGGGGTCCCCCGGCGGGCCGCGGATAAACTTGGCGCACAGCCACTTCCA
GATGCTCGCCGGGGTGTGCGCGGAGTTCTGCGCCGTGACCGGGAGGCTGG
ACATGCTGTTTGGACAGATATTTCAAGCGTTTCGCGCGCGCGGTCAGCAG
GGCGTCTTCTTGGACACGCTCGAGCCGTACGTGCTCATGGGCAAGCTCAA
GACCCTGTCGCCAGAGGTCATCAGCGCGTTCATCGACAGGTGTCAG
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