prot_E_fasciculatus_S2_contig7263.15459.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7263.15459.1
Unique Nameprot_E_fasciculatus_S2_contig7263.15459.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length225
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Match: D8LF43_ECTSI (RPA_interact_C domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF43_ECTSI)

HSP 1 Score: 316 bits (809), Expect = 1.040e-107
Identity = 152/172 (88.37%), Postives = 161/172 (93.60%), Query Frame = 0
Query:   53 MVDEDELGWGDGGGAEDYCDEENLLSPDEYLEMMDFIDEACREENRRAEAALVEDYERTRRLEEEAVECAVASFDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEQLKQQLADTYMEHSIACSAEPTFMVEGAPGFDVLWSSCDGCGFARVVL 224
            MVDEDELGWGDGGGAED CDEE+LLSPDEYLEMM +I+EAC+EE+ RAEAA++EDYE TRRLEEE VE AVAS DDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLE  KQQLADTY EHS ACSAEP+F+VEGAPGFDVLWSSCDGCGFARVVL
Sbjct:    1 MVDEDELGWGDGGGAEDDCDEEHLLSPDEYLEMMQYIEEACKEEDFRAEAAVLEDYELTRRLEEEEVEYAVASLDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEHFKQQLADTYSEHSTACSAEPSFVVEGAPGFDVLWSSCDGCGFARVVL 172          
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Match: A0A835YX80_9STRA (Replication protein A interacting C-terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YX80_9STRA)

HSP 1 Score: 100 bits (250), Expect = 2.740e-23
Identity = 61/156 (39.10%), Postives = 84/156 (53.85%), Query Frame = 0
Query:   77 LSPDEYLEMMDFIDEACREENRRAEAALVEDYERTRRLEEE--------AVECAVASFDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEQLKQQLADTYMEHSIACSAEPTFMVEGAPGFDVLWSSCDGCGFARVVL 224
            L+P+EY +MM FI++A   E  RA+A+                      A+  A A  +D  G  +DD VLCPVCK  +LL  G   A+I+C CGFRL T G+ + L  L+Q LA+ + +H   C  +PTF V    G  +LWS C  CGF ++VL
Sbjct:    5 LTPEEYTDMMLFIEQALAAELARADASXXXXXXXXXXXXXXXXXXXXXAALARAAAEAEDGRG-WRDDEVLCPVCKGGWLLQHG---ATIMCTCGFRLQTDGEGMQLGVLRQALAEVFTDHRERCHLQPTFRVREEFGAAMLWSECSACGFEQIVL 156          
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Match: A0A6H5KTE2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTE2_9PHAE)

HSP 1 Score: 98.6 bits (244), Expect = 7.040e-21
Identity = 75/103 (72.82%), Postives = 79/103 (76.70%), Query Frame = 0
Query:    1 MFTSLREQTQGFVEGNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEAMVDEDELGWGDGGGAEDYCDEENLLSPDEYLEMMDFIDEACREENRRAEAA 103
            M  S REQTQGFVEGN                XXXXXXXXXXXXXXXXXX  MVDEDELGWGDGGGAED CDEENLLSPDEYLEMM +I+EAC+EE+ RAEAA
Sbjct:  214 MSISFREQTQGFVEGNNDEDDALMAHDDGHAQXXXXXXXXXXXXXXXXXX--MVDEDELGWGDGGGAEDCCDEENLLSPDEYLEMMQYIEEACKEEDLRAEAA 314          
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Match: UPI0003F09FB1 (RPA-interacting protein A-like n=1 Tax=Saccoglossus kowalevskii TaxID=10224 RepID=UPI0003F09FB1)

HSP 1 Score: 70.1 bits (170), Expect = 5.910e-11
Identity = 38/124 (30.65%), Postives = 65/124 (52.42%), Query Frame = 0
Query:  101 EAALVEDYERTRRLEEEAVECAVASFDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDRLGLEQLKQQLADTYMEHSIACSAEPTFMVEGAPGFDVLWSSCDGCGFARVVL 224
            E  +++DYE++R+++E A+  AV          + D ++CPVC+++ L       + I CACG R+DT  D + L  +K +L +   +HS AC+ +  F      G   L  +C  C F  ++L
Sbjct:  121 EQEIIQDYEKSRQIDEAALCAAVEKL-------ETDELICPVCRKNPL---NQNKSVIFCACGMRIDTEYDCVTLSYVKDRLKEAISQHSRACTGKALFSTLDQCGLQNLVIACKTCDFLDIIL 234          
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Match: A0A7S0VBY7_9CRYP (Hypothetical protein n=1 Tax=Hemiselmis tepida TaxID=464990 RepID=A0A7S0VBY7_9CRYP)

HSP 1 Score: 66.6 bits (161), Expect = 4.070e-10
Identity = 47/155 (30.32%), Postives = 74/155 (47.74%), Query Frame = 0
Query:   73 EENLLSPDEYLEMMDFIDEACREENRRAEAALVEDYERTRRLEEEAVECAVASFDDINGNGQDDAVLCPVCKRDYL-LHPGPPSASIVCACGFRLDTGGDRLGLEQLKQQLADTYMEH-SIACSAEPTFMVEGAPG-FDVLWSSCDGCGFARVVL 224
            EE+ LS +EY+ +M +++EA   E R+ E  ++         ++E  E    +     G+     V CPVC RD L  H       + C CG RL    +++ L QL+  L D +  H S  C+ +P   ++  PG  D+L  +C  C F  VV+
Sbjct:   31 EEDGLSEEEYIGLMQYLEEAVVTELRKQEQEIIAQE----LFDQERAESNALAASHAEGH----RVTCPVCMRDTLHSHRNV----VFCGCGMRLSCQTEQVSLVQLESMLLDRFAAHTSSGCANQPVCSIQTVPGGVDMLMMACAACDFMDVVV 173          
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Match: D8R075_SELML (Uncharacterized protein n=3 Tax=Selaginella moellendorffii TaxID=88036 RepID=D8R075_SELML)

HSP 1 Score: 60.8 bits (146), Expect = 1.230e-7
Identity = 50/157 (31.85%), Postives = 79/157 (50.32%), Query Frame = 0
Query:   77 LSPDEY----LEMMDFIDEACREENRRAEAALVEDYERTRRLEEEAVECAVASFDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDR----LGLEQLKQQLADTYMEH-SIACSAEPTFMVEGAPGFDVLWSSCDGCGFARVVL 224
            LSP EY    L M   + +    E ++     +EDYE+   LE+ ++    AS   +  N Q++ VLCP+C+R +LL       SI C+    LD G  R    +G+E ++ +LA+   +H S  CS++P F  +    F  L+  C+ C F  VV+
Sbjct:   87 LSPQEYEDLMLAMQAVLYQGTYPEQQQHAIDDLEDYEKATALEDSSL----ASL--LEQNHQENGVLCPLCRRGFLLDK---ENSIRCSSNGCLDLGSQRDKLKVGVEFVRIRLAELMDQHYSSGCSSQPVFTFKDE--FQSLFILCNSCDFFEVVV 232          
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Match: UPI000D1C7D68 (uncharacterized protein LOC9653983 n=1 Tax=Selaginella moellendorffii TaxID=88036 RepID=UPI000D1C7D68)

HSP 1 Score: 59.3 bits (142), Expect = 7.290e-7
Identity = 42/125 (33.60%), Postives = 67/125 (53.60%), Query Frame = 0
Query:  105 VEDYERTRRLEEEAVECAVASFDDINGNGQDDAVLCPVCKRDYLLHPGPPSASIVCACGFRLDTGGDR----LGLEQLKQQLADTYMEH-SIACSAEPTFMVEGAPGFDVLWSSCDGCGFARVVL 224
            +EDYE+   LE+ ++    AS   +  N Q++ VLCP+C+R +LL       SI C+    LD G  R    +G+E ++ +LA+   +H S  CS++P F  +    F  L+  C+ C F  VV+
Sbjct:  190 LEDYEKATALEDSSL----ASL--LEQNHQENGVLCPLCRRGFLLDK---ENSIRCSSNGCLDLGSQRDKLKVGVEFVRIRLAELMDQHYSSGCSSQPVFTFKDE--FQSLFILCNSCDFFEVVV 303          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7263.15459.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 7
Match NameE-valueIdentityDescription
D8LF43_ECTSI1.040e-10788.37RPA_interact_C domain-containing protein n=1 Tax=E... [more]
A0A835YX80_9STRA2.740e-2339.10Replication protein A interacting C-terminal-domai... [more]
A0A6H5KTE2_9PHAE7.040e-2172.82Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
UPI0003F09FB15.910e-1130.65RPA-interacting protein A-like n=1 Tax=Saccoglossu... [more]
A0A7S0VBY7_9CRYP4.070e-1030.32Hypothetical protein n=1 Tax=Hemiselmis tepida Tax... [more]
D8R075_SELML1.230e-731.85Uncharacterized protein n=3 Tax=Selaginella moelle... [more]
UPI000D1C7D687.290e-733.60uncharacterized protein LOC9653983 n=1 Tax=Selagin... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 97..117
NoneNo IPR availablePRODOMPD472859coord: 104..224
e-value: 6.0E-8
score: 136.0
IPR028159RPA-interacting protein, C-terminal domainPFAMPF14768RPA_interact_Ccoord: 139..221
e-value: 1.2E-21
score: 77.0
IPR028156RPA-interacting proteinPANTHERPTHR31742FAMILY NOT NAMEDcoord: 43..224

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7263contigE_fasciculatus_S2_contig7263:2825..4773 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7263.15459.1mRNA_E_fasciculatus_S2_contig7263.15459.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7263 1551..5052 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7263.15459.1 ID=prot_E_fasciculatus_S2_contig7263.15459.1|Name=mRNA_E_fasciculatus_S2_contig7263.15459.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=225bp
MFTSLREQTQGFVEGNNDDDDDHMAHDGGDAQQPRQPPQQQQQQQQQQQS
EAMVDEDELGWGDGGGAEDYCDEENLLSPDEYLEMMDFIDEACREENRRA
EAALVEDYERTRRLEEEAVECAVASFDDINGNGQDDAVLCPVCKRDYLLH
PGPPSASIVCACGFRLDTGGDRLGLEQLKQQLADTYMEHSIACSAEPTFM
VEGAPGFDVLWSSCDGCGFARVVL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR028156RIP
IPR028159RPA_interact_C_dom