mRNA_E_fasciculatus_S2_contig725.15443.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW30_9PHAE) HSP 1 Score: 1105 bits (2858), Expect = 0.000e+0 Identity = 597/732 (81.56%), Postives = 620/732 (84.70%), Query Frame = 1
Query: 1 RTLQASTSRGHHGGTNAGELFEERYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYANLALTGRYLSTGQEWSERLRIRDRTRTIKYTLNPVWNESFSLPVRRAGAILRVELWDWDRGSSDDSLGSVEVSIDEELRSQT-------------------------------LEAFSEMEEETQEEEEIAADTTAGGEGEGSATTSSLRWRTSVLGRKGATADDRTDHDHGPGNESPSCEACIEVRRKRFGEVRLQLRFEFSEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLQQLAQPYIGCMQGASAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALLRIAIFGYLEHFASLREDHEDDVDVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDCKMQEMYLAVRKTKKLPAVVEQIGRRTFAKAGLPPQRQVETIGKALTKVRRQFHPLTGTQCLSMVVALASHMLLQLWLYRTSRFHLYFLLLCVGVFGYNFYSWRGRAFILAVQAARQCRQTRVALTSPTCADSTQTTSVAPGDAAPTTTFANAPFSEATPLRQDGRFSSEVPPRDQGENQRKSTVGTEDITRVSSAGGTAIQSFPGTPIYGSTACTMAPEDDSGVRSHADDVRDEENVEHSTPVVPQKPRRLRHSRKQRKWNIGHSGSAYGDV-LAEDANSDSGEAPGKSEKASWRSRVSKWYRDK 2100
RT Q +TSR HG +NA EL+EERYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPY NLALTGRYLSTGQEWSERLRI DRTRTIKYTLNPVWNE+FSLP+RRAGAILRVELWDWDRGS D+SLGSVEVSID+ELRSQ LEAFSEMEEE SSLRW TSVLGRKGATA+DR DHDHGP ESPSCEACIEVRRKRFGEVRLQLR EF+EFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLL+QLAQPYIGCMQGASAIVHWVHPWKSLAWF+ALVVMLLHPCLL+VVINGAL+RIAI GYLEHFA+ RED ED VDVEMGHAAKSAAKAKAKENISKKSLLPPIDAPED KMQ MYL VRKTKKLPAVVEQIGRR+FAKAGL PQRQVETIGKALTKVRR+FHPL TQCLSMVV L SHMLLQLWLYRTSRFHLYF+L+CVGVFGYNFYSWRGRAFILAVQAARQ RQTR+AL S TCADST T SVA DA PTTTFA APFSEATPLRQDG FSSE PPRDQGENQ KS GTEDITRV S+GGTAIQS T YGSTA TMAPEDDS VRSHADD DEENV+ S PVVP+KPR LRHSRKQRKW+IGHSGSAYGDV LAED NSDSGE PGKSEKA WRSRVSKWYRDK
Sbjct: 14 RTFQTNTSRDTHGRSNADELYEERYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYVNLALTGRYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPIRRAGAILRVELWDWDRGSCDESLGSVEVSIDKELRSQKTIDTWYVLDAPWDLKDSPSAVPDAHISRLAELEAFSEMEEEXXXX-XXXXXXXXXXXXXXXXXXSSLRW-TSVLGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRVEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQGASAIVHWVHPWKSLAWFVALVVMLLHPCLLMVVINGALMRIAIRGYLEHFAAQREDDEDYVDVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRSFAKAGLSPQRQVETIGKALTKVRRRFHPLGATQCLSMVVILVSHMLLQLWLYRTSRFHLYFMLICVGVFGYNFYSWRGRAFILAVQAARQSRQTRIALASLTCADSTHTASVAGVDATPTTTFATAPFSEATPLRQDGGFSSEAPPRDQGENQHKSAFGTEDITRVFSSGGTAIQSLSDTR-YGSTAGTMAPEDDSDVRSHADDGSDEENVDQSAPVVPRKPRPLRHSRKQRKWSIGHSGSAYGDVVLAEDDNSDSGEVPGKSEKAGWRSRVSKWYRDK 742
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: Protein (kinase C, beta 1, like n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4V0_ECTSI) HSP 1 Score: 801 bits (2070), Expect = 1.060e-283 Identity = 420/478 (87.87%), Postives = 432/478 (90.38%), Query Frame = 1
Query: 1 RTLQASTSRGHHGGTNAGELFEERYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYANLALTGRYLSTGQEWSERLRIRDRTRTIKYTLNPVWNESFSLPVRRAGAILRVELWDWDRGSSDDSLGSVEVSIDEELRSQTLEAFSEMEEETQEEEEIAADTTAGGEGEGSATTSSLRWRTSVLGRKGATADDRTDHDHGPGNESPSCEACIEVRRKRFGEVRLQLRFEFSEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLQQLAQPYIGCMQGASAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALLRIAIFGYLEHFASLREDHEDDVDVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDCKMQEMYLAVRKTKKLPAVVEQIGRRTFAKAGLPPQRQVETIGKALTKVRRQFHPLTGTQCLSMVVALASHMLLQLWLYRTSR 1434
RT Q TSR HG NAGEL+EERYGVKDYRSI PWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPY NLALTGRYLSTGQEWSERLRI DRTRTIKYTLNPVWNE+FSLPVRRAGA+LRVELWDWDRGS DDSLGSVEVSID+ELRSQ LEAFSEMEEET TTSSLRW TSVLGRKGATA+DR DHDHGP ESPSCEACIEVRRKRFGEVRLQLRFEF+EFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLL+QLAQPYIGCMQ ASAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGAL+RIAI GYL+HFA+ RED+EDD DVEMGHAAKSAAKAKAKENISKKSLLPPIDAPED KMQ MYL VRKTKKLPAVVEQIGRRTFAKAGL PQRQVETIGKALTKVRR+FHPL TQCLSMVVALASHMLLQLWLYRTSR
Sbjct: 14 RTFQTGTSRDTHGRINAGELYEERYGVKDYRSINPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYVNLALTGRYLSTGQEWSERLRICDRTRTIKYTLNPVWNETFSLPVRRAGAVLRVELWDWDRGSCDDSLGSVEVSIDKELRSQKLEAFSEMEEETXXX-XXXXXXXXXXXXXXXXTTSSLRW-TSVLGRKGATAEDRIDHDHGPREESPSCEACIEVRRKRFGEVRLQLRFEFNEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLRQLAQPYIGCMQEASAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALIRIAILGYLDHFAAQREDNEDDADVEMGHAAKSAAKAKAKENISKKSLLPPIDAPEDRKMQAMYLTVRKTKKLPAVVEQIGRRTFAKAGLSPQRQVETIGKALTKVRRRFHPLRATQCLSMVVALASHMLLQLWLYRTSR 489
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN3_ECTSI) HSP 1 Score: 209 bits (531), Expect = 3.360e-58 Identity = 116/247 (46.96%), Postives = 144/247 (58.30%), Query Frame = 1
Query: 67 ERYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYANLALTGRYLSTGQEWSERLRIRDRTRTIKYTLNPVWNESFSLPVRRAGAILRVELWDWDRGSSDDSLGSVEVSIDEELRSQTLEAFSEMEEETQEEEEIAADTTAGGEGEGSATTSSLRWRTSVLGRKGATADDRTDHDHGPGNESPSCEACIEVRRKRFGEVRLQLRFEFSEFAETCSHLWPEEPPE 807
+ YG DYRSI W FPA LL+ +A ++IG LH KVVEARGL++RD G+SDP+A L LTGRYLS GQEWSE LR+R++TR IK++LNPVWNE FSLPVRRAGA+LR+ LWDW+ DD LG +EV + GG+ +L +K P E IE RR+ +GEVRLQLRFEF+E AETCS++WPEEPP+
Sbjct: 49 DNYGWMDYRSISGWKFPAWPLLQPSTRAKMTIGTLHAKVVEARGLISRD-FAGRSDPFAELELTGRYLSHGQEWSEPLRVREKTRVIKFSLNPVWNEEFSLPVRRAGAVLRIRLWDWNASIPDDPLGHIEVKM-------------------------------GGD---------------LLAQKDGV---------------PLHEPSIEERRESYGEVRLQLRFEFNELAETCSYIWPEEPPK 233
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL3_9PHAE) HSP 1 Score: 220 bits (561), Expect = 6.630e-56 Identity = 138/332 (41.57%), Postives = 180/332 (54.22%), Query Frame = 1
Query: 223 GKSDPYANLALTGRYLSTGQEWSERLRIRDRTRTIKYTLNPVWNESFSLPVRRAGAILRVELWDWDRGSSDDSLGSVEVSIDEELRSQ-------------------------------------TLEAFSEM-----------------EEETQEEEEIAA---DTTAGGEGEGSATTSSLRWRTSVLGRKGATAD-DRTDHDHGPGNESPSCEACIEVRRKRFGEVRLQLRFEFSEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLQQLAQPYIGCMQGASAIVHWVHPWKSLAWFIALVVMLLHPCLLIVVINGALLRIAIFGYLE 1044
GKSDPY L LTGRYLS GQEWSERLR++DRTR IK TLNPVW+E F LPVRRAGA+L+VE+WDWDR S DD LG EV+I EEL SQ ++ +M E + E I D + GG G G + + +DH H E+ +C+ CIE RRKRFGEVRL L +++ EFAE CSH WPEEP +P ++ FSPN++Y M+ ++ +PY+ ++ AI W P +SL W +A+V ML+ P +LIVV+N AL+ IA+ YL+
Sbjct: 7 GKSDPYVKLCLTGRYLSHGQEWSERLRLKDRTRIIKTTLNPVWDEEFCLPVRRAGAVLKVEVWDWDRSSPDDPLGHFEVAIGEELLSQQEKXXXXXXXXXXXXXXXXXXXRADASKGNGGGEEATAVDGGGDMDTVDDADXXXXXXXXGGEINSPPESPIGLGLDDGSGGGNGGGYSLSGXXXXXXXXXXXXXXXGSMGPSDHSHQSEQEARACDVCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFKPYVTFLKEVDAINSWGRPRRSLMWMLAVVGMLVVPPVLIVVVNVALMHIAVSAYLK 338
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FQN4_ECTSI) HSP 1 Score: 117 bits (292), Expect = 1.960e-23 Identity = 69/135 (51.11%), Postives = 85/135 (62.96%), Query Frame = 1
Query: 1168 IDAPEDCKMQEMYLAVRKTKKLPAVVEQIGRRTFAKAGLPPQRQVETIGKALTKVRRQFHPLTGTQCLSMVVALASHMLLQLWLYRTSRFHLYFLLLCVGVFGYNFYSWRGRAFILAVQAARQCRQTRVALTSPT 1572
D D +M + +V KTKKLP+ VEQIG++ AK G Q +E G L VRR FHPL L + + +H LLQL LY S LYFLL+ VG+F NFY+WRGRAF LAVQAARQ R+TR ++T PT
Sbjct: 7 FDPYADEQMDAILASVSKTKKLPSAVEQIGKKALAKDGRRLQNDLEFWGVILMLVRRLFHPLEVKVLLGTIGIIVAHTLLQLGLYFASWIRLYFLLVLVGLFASNFYAWRGRAFFLAVQAARQSRRTRWSITHPT 141
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CKJ1_9STRA) HSP 1 Score: 115 bits (289), Expect = 1.370e-22 Identity = 63/112 (56.25%), Postives = 79/112 (70.54%), Query Frame = 1
Query: 148 ATISIGVLHVKVVEARGLMARDGMLGKSDPYANLALTGRYLSTGQEWSERLRIRDRTRTIKYTLNPVWNESFSLPVRRAGAILRVELWDWDRGSSDDSLGSVEVSIDEELRS 483
A +S+G L V VVEARGL A D G+SDPYA L +TGRYLS QEW R+ RT +TL+P WNE+F+ PVRRAGA L+V L+D D S+DD LG +E+++DEEL S
Sbjct: 70 ADMSVGELTVDVVEARGLRAAD-FNGRSDPYAVLVMTGRYLSHAQEWPPEARVTRRTAVKMFTLHPEWNETFAFPVRRAGARLQVLLYDKDLTSADDLLGCLEITLDEELLS 180
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FL70_ECTSI) HSP 1 Score: 109 bits (273), Expect = 4.030e-21 Identity = 142/597 (23.79%), Postives = 229/597 (38.36%), Query Frame = 1
Query: 46 NAGELFEERYGVKDYRSIKPWMFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYANLALT--GRYLSTGQEWSERLRIRDRTRTIKYTLNPVWNESFSLPVR----RAGAILRVELWDWDRGSSDDSLGSVEVSIDEELRSQTLEAFSEMEEETQEEEEIAADTTAGGEGEGSATTSSLRWRTSVLG--RKGATADDRTDHDHGPGNESPSCEACIEVRRKRFGEVRLQLRFEFSEFAETCSHLWPEEPPEPAEMTFSPNRVYYNAMLLQQLAQPYIGCMQGASAIVHWVHPWK--------------------------------------------------SLAWFIALVVMLLH---------------PCLLIVVINGA------------------------------------LLRIAIFGY---------------LEHFASLREDHE-------DDVDVEMGHAA---KSAAKAKAKENISKKSLLPPIDAPEDCKMQEMYLAVRKTKKLPAVVEQIGRRTFAKAGLPPQRQVETIGKALTKVRRQFHPLTGTQCLSMVVALASHMLLQLWLYRTSR 1434
+A + +G+KD+R I W F ++ LL K SIGVL V G++ + G + + + A + GR + + +I L ++ S P+R R AI E+ S +S V + +D++ AGG G G + + + ++ LG RKG + +DH H E+ +C+ CIE RRKRFGEVRL L +++ EFAE CSH WPEEP +P ++ FSPN++Y M+ ++ +PY+ ++ AI W P K S F +L L+ P V + + + R +IF + + A++ ++ V ++ HAA K + A K L P+ D +++E+Y + TK++PAVV Q+G+ F K+G Q ++ +G L +R++FHPL + AL +HM+LQLWLY + R
Sbjct: 39 DASSFYSSDHGMKDFRVIPRWSFFSQPLLDPAEKMKTSIGVL----VARAGVVGEAAVEGPDEDHQDHAQSRLGRGVFLASQ-----KIGRGLEGGSLGLGSFYSRRSSGPLRGRHRRRAAIPTGEI-----NSPPESPIHVGLGVDDDF--------------------------AGGNGGGYSASGGRQGSSTKLGFGRKGGSMGP-SDHSHQSEQEARACDVCIERRRKRFGEVRLILWYQYDEFAEMCSHTWPEEPLKPPKIVFSPNQLYRKGMVFWEMFRPYVTFLKEVDAISSWGRPRKRQGGVFGARRIRFDVGQEGGXXXXXXXXXXXQLSMXXXXXXXXXXRSQRKSSTTFFSLSRSLIRGNRGAPIRRRVSDPDPVTANAVGSASAGVALRNSSSAPSRTAPWRAKAPRSAPPSTITTPTTMARTSIFAASSGASQPPSTPRALSISNAAAIDSNNSYTGPGVGSGVSRDVVHAAGVAKGGVISAAGAGSKKIKKLLPVRGTRDPELRELYERLGGTKRVPAVVNQLGKVFFTKSGPSIQLGLDKMGMMLIMIRQRFHPLRARDLGLTMTALFAHMVLQLWLYVSGR 594
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL17_9PHAE) HSP 1 Score: 75.1 bits (183), Expect = 3.820e-13 Identity = 40/64 (62.50%), Postives = 44/64 (68.75%), Query Frame = 3
Query: 2334 VGGG----HPPIVPERGTTPSAAQTEAGIVRSCTIPRQASRI*GVLHPIGRTRAENGNPATLFC 2513
+GGG H PIVPERGTTPSA QTEA I SCT P Q +I GVL + RTRA+N NPA L C
Sbjct: 1 MGGGVPPRHTPIVPERGTTPSAGQTEASITSSCTNPLQVFKIQGVLRRVDRTRAKNVNPAKLLC 64
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGP5_9PHAE) HSP 1 Score: 72.8 bits (177), Expect = 2.010e-12 Identity = 36/53 (67.92%), Postives = 40/53 (75.47%), Query Frame = -3
Query: 2427 VRV*LVTYAAGTKTAFFGRKARTPTEQCGRVAIFGACAANRMQNALNSRCLPR 2585
+R LVT+AAG KTA FG KART EQCGRV +FG+CAAN QNALN R L R
Sbjct: 1 MRFELVTHAAGAKTALFGPKARTSAEQCGRVDVFGSCAANMTQNALNCRYLQR 53
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Match: C2 (domain-containing protein n=1 Tax=Pseudallescheria apiosperma TaxID=563466 RepID=A0A084GB88_PSEDA) HSP 1 Score: 82.4 bits (202), Expect = 3.170e-12 Identity = 51/120 (42.50%), Postives = 65/120 (54.17%), Query Frame = 1
Query: 157 SIGVLHVKVVEARGLMARDGMLGKSDPYANLALTGRYLSTGQEWSERLRIRDRTRTIKYTLNPVWNESFSLPV-RRAGAILRVELWDWDRGSSDDSLGSVEVSIDEELRSQTLEAFSEME 513
++G L V V+EA+ L A D GKSDPY L G+ + +T+TIK TLNPVWNE F +PV R GA R+ +WDWD S D LG ++S+ E LE F ME
Sbjct: 1104 NMGTLRVDVIEAQDLQAADSN-GKSDPYCKFDLNGQEVY-------------KTKTIKKTLNPVWNEYFEVPVPSRTGAKFRLSVWDWDLASQPDPLGEADISLSE------LEPFRPME 1203 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig725.15443.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig725.15443.1 >prot_E_fasciculatus_S2_contig725.15443.1 ID=prot_E_fasciculatus_S2_contig725.15443.1|Name=mRNA_E_fasciculatus_S2_contig725.15443.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=665bp MFPARVLLKAKRKATISIGVLHVKVVEARGLMARDGMLGKSDPYANLALTback to top mRNA from alignment at E_fasciculatus_S2_contig725:17924..26430- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig725.15443.1 ID=mRNA_E_fasciculatus_S2_contig725.15443.1|Name=mRNA_E_fasciculatus_S2_contig725.15443.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=8507bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig725:17924..26430- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig725:17924..26430- >mRNA_E_fasciculatus_S2_contig725.15443.1 ID=mRNA_E_fasciculatus_S2_contig725.15443.1|Name=mRNA_E_fasciculatus_S2_contig725.15443.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1995bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig725:17924..26430- (Ectocarpus fasciculatus EfasUO2)back to top |