mRNA_E_fasciculatus_S2_contig7237.15425.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPC9_9PHAE) HSP 1 Score: 458 bits (1178), Expect = 9.610e-161 Identity = 258/287 (89.90%), Postives = 264/287 (91.99%), Query Frame = 1
Query: 4 VAAQKLEEISHKDGKTYIQMMLFSKVSYGVEYTEEVKGLGAVECNTQKWPVSPYTVAVRNNSGKGNFAELLVDGQKIAEKYVPAGDSVIFEGIPTEDGIQELLFSLPRYTTLREKEIGGKSLPDAVASELGTIKVVWRDCALVGNEFKDDYRPYAAASSYKQANKTDAKHTGAAGAGAGEGEKFASTTRAGKVIGMNEARSCVVNRYRYEGEPWSATLLYRTKDYLEKIGVIPKDMSPEEVAERXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVSLVDGPPPVAAEE 864
V QKLEEISHKDG TYIQM+LFSKVSY VEYTEEVKGLGAVE NTQKWPVSPYTVAVRNNSGKGNFA+L VDGQKIAEKYVPAGDSVIFEGIPTE+GIQELLFSLPRYTTLREKEIGGKSLPDAVASELGTIKVVWRDCALVG +F D+YR Y AASSYKQANKTDAK TG AG EKFASTTRAGKVIGMNEARSCVVNRYRYEGEPWSATLLYRTKDYLEK+GVIPKDMSPEEVAER XXXXXXXXXXXXXXXXXXXXXXVPVSLVDGPPPVAAEE
Sbjct: 14 VGGQKLEEISHKDGNTYIQMILFSKVSYSVEYTEEVKGLGAVERNTQKWPVSPYTVAVRNNSGKGNFAQLYVDGQKIAEKYVPAGDSVIFEGIPTEEGIQELLFSLPRYTTLREKEIGGKSLPDAVASELGTIKVVWRDCALVGKDFADNYRTYEAASSYKQANKTDAKRTGGAGXXXXXXEKFASTTRAGKVIGMNEARSCVVNRYRYEGEPWSATLLYRTKDYLEKVGVIPKDMSPEEVAERRRMRLXXXXXXXXXXXXXXXXXXXXXXVPVSLVDGPPPVAAEE 300
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM6_ECTSI) HSP 1 Score: 447 bits (1149), Expect = 7.540e-156 Identity = 261/298 (87.58%), Postives = 270/298 (90.60%), Query Frame = 1
Query: 4 VAAQKLEEISHKDGKTYIQMMLFSKVSYGVEYTEEVKGLGAVECNTQKWPVSPYTVAVRNNSGKGNFAELLVDGQK----------IAEKYVPAGDSVIFEGIPTEDGIQELLFSLPRYTTLREKEIGGKSLPDAVASELGTIKVVWRDCALVGNEFKDDYRPYAAASSYKQANKTDAKHTGAAGAGAGEGEKFASTTRAGKVIGMNEARSCVVNRYRYEGEPWSATLLYRTKDYLEKIGVIPKDMSPEEVAERXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVSLVDGPPPVAAEES 867
V QKLEEISHKDGKTYIQMMLFSKVSYGV YTEEVKGLGA E NTQKWPVSPYTVAVRNNSGKGNFA+L VDGQK +AEKYVPAGDSVIFEGIPTE+GIQELLFSLPRYTTLREKEIGG+SLPDAVASELGTIKVVWRDCALVG +F D+YR YAAASSYKQANKTDAK TG AG EKFASTTRAGKVIGMNEARSCVVNRY+YEGEPWSATLLYRTKDYLEKIGVIPKD SP+EVAERXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVSLVDGPPPVAAEE+
Sbjct: 2 VGGQKLEEISHKDGKTYIQMMLFSKVSYGVVYTEEVKGLGARESNTQKWPVSPYTVAVRNNSGKGNFAQLYVDGQKGLATGADTTAVAEKYVPAGDSVIFEGIPTEEGIQELLFSLPRYTTLREKEIGGQSLPDAVASELGTIKVVWRDCALVGKDFADNYRTYAAASSYKQANKTDAKRTGGAGXXXXXXEKFASTTRAGKVIGMNEARSCVVNRYQYEGEPWSATLLYRTKDYLEKIGVIPKDTSPQEVAERXXXXXXXXXXXXXXXXXXXXXXXXXXXVPVSLVDGPPPVAAEEA 299
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM5_ECTSI) HSP 1 Score: 264 bits (675), Expect = 2.070e-84 Identity = 140/244 (57.38%), Postives = 175/244 (71.72%), Query Frame = 1
Query: 13 QKLEEISHKDGKTYIQMMLFSKVSYGVEYTEEVKGLGAVECNTQKWPVSPYTVAVRNNSGKGNFAELLVDGQKIAEKYVPAGDSVIFEGIPTEDGIQELLFSLPRYTTLREKE--IGGKSLPDAVASELGTIKVVWRDCALVGNEFKDDYRPYAAASSYKQANKTDAKHTGAAGAGAGEGEK-FASTTRAGKVIGMNEARSCVVNRYRYEGEPWSATLLYRTKDYLEKIGVIPKDMSPEEVAER 735
+KLEEI DG TY+ M LFSKVSYGVE+ EEVKG GA E +QKWPV PY V VRN S K A L VDGQK++ K+V AG + +FEGIPT GIQELLFSLPR+TTL+EK+ GG++L ++ SE+G +K+VW DC G F ++ Y+ +S+ QANK+DAK TGA GAG G EK FASTTRAGKV+ +NEARSC V R+ GEPW A LLYRT+ +L+ IGV+ + + + AER
Sbjct: 17 EKLEEIKASDGNTYVVMPLFSKVSYGVEFVEEVKGHGAAEKISQKWPVCPYKVVVRNLSAKTQKATLYVDGQKVSRKFVRAGGNEVFEGIPTAQGIQELLFSLPRFTTLKEKQGNSGGRALKESGTSEIGAVKIVWNDCVKTGTGFSSHFQEYST-TSFTQANKSDAKATGA-GAGGGSSEKAFASTTRAGKVLRLNEARSCTVTRFDTVGEPWEARLLYRTEHHLQDIGVLGTNETAAQEAER 258
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM2_ECTSI) HSP 1 Score: 252 bits (643), Expect = 1.380e-79 Identity = 135/244 (55.33%), Postives = 169/244 (69.26%), Query Frame = 1
Query: 13 QKLEEISHKDGKTYIQMMLFSKVSYGVEYTEEVKGLGAVECNTQKWPVSPYTVAVRNNSGKGNFAELLVDGQKIAEKYVPAGDSVIFEGIPTEDGIQELLFSLPRYTTLREKE--IGGKSLPDAVASELGTIKVVWRDCALVGNEFKDDYRPYAAASSYKQANKTDAKHTGAAGAGAGEGEK-FASTTRAGKVIGMNEARSCVVNRYRYEGEPWSATLLYRTKDYLEKIGVIPKDMSPEEVAER 735
+KLEEI DG TY+ M LFSKVSYGVE+ EEVKG GA E +QKWPV PY V VRN S K L VDGQK+ K+V AG++ +FEGIPT GIQELLFSLPR+TTL+E++ GG++L + SE+G +K+VW DC G +R Y+ +S+ QANK+DAK TGA GAG G EK FASTTRAGKVI +NE +SC V+ Y G+PW A LLYRT+ +L+ IGV+ + + ER
Sbjct: 17 EKLEEIKANDGNTYVVMPLFSKVSYGVEFVEEVKGHGAAEKISQKWPVCPYKVVVRNLSAKIQKTTLYVDGQKVCRKHVRAGENQVFEGIPTAKGIQELLFSLPRFTTLKEQQGNSGGRALKKSRTSEIGVVKIVWNDCVKTGKRSSSRHRKYST-TSFTQANKSDAKATGA-GAGGGSSEKAFASTTRAGKVIRLNEPKSCTVSTYHNVGKPWEARLLYRTEHHLQDIGVLGTSETAAQEIER 258
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLM7_ECTSI) HSP 1 Score: 103 bits (258), Expect = 2.590e-24 Identity = 51/75 (68.00%), Postives = 57/75 (76.00%), Query Frame = 1
Query: 352 IGGKSLPDAVASELGTIKVVWRDCALVGNEFKDDYRPYAAASSYKQANKTDAKHTGAAGAGAGEGEKFASTTRAG 576
+ GKSLPDA+A E+GTIK+VWRDC VG EF D+ R YA SSYKQANKTDA TG AG GAGEG F+STT G
Sbjct: 1 MSGKSLPDAIAREIGTIKIVWRDCVKVGKEFSDNCREYATVSSYKQANKTDAVATGGAGTGAGEGMSFSSTTSCG 75
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Match: uncharacterized (protein LOC117335672 n=1 Tax=Pecten maximus TaxID=6579 RepID=UPI001457EB85) HSP 1 Score: 75.9 bits (185), Expect = 2.760e-12 Identity = 59/189 (31.22%), Postives = 91/189 (48.15%), Query Frame = 1
Query: 34 HKDGKTYIQMMLFSKVSYGVEYTEEVKGLGAVECNTQKWPVSPYTVAVRNNSG-KGNFAELLVDGQKIAEKYVPAGDSVIFEGIPTEDGIQELLFSLPRYTTLREKEIGGKSLPDAVASELGTIKV----VWRDCALVGNEFKDDYRPYAAASSYKQANKTDAKHTGAAGAGAGEGEKFASTTRAGKVI 585
+KDG +Y++ LF+ SY EY+E + G E TQKWPV+P+ +A+R S ++ + VDGQ + + VP G + + G + E LFSLPR+ + G K D V S +G I+V + V +D + QANK D +G+ +TT+AG+V+
Sbjct: 22 NKDGVSYVESNLFTPFSYQQEYSEIIHG----ENETQKWPVTPFVIALRGKSSIPRSYYRVYVDGQVVKKMSVPPGKTRLVRGFRDGNNCVEFLFSLPRFC----RGEGDKLATDQV-SRVGLIEVECYKAVKKATFVTRRKRD--------LLFDQANKNDCFVVT-------QGQYLMATTKAGRVL 186
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Match: Uncharacterized (protein n=2 Tax=Mizuhopecten yessoensis TaxID=6573 RepID=A0A210PJV3_MIZYE) HSP 1 Score: 73.2 bits (178), Expect = 3.890e-11 Identity = 55/185 (29.73%), Postives = 91/185 (49.19%), Query Frame = 1
Query: 34 HKDGKTYIQMMLFSKVSYGVEYTEEVKGLGAVECNTQKWPVSPYTVAVRNNSG-KGNFAELLVDGQKIAEKYVPAGDSVIFEGIPTEDGIQELLFSLPRYTTLREKEIGGKSLPDAVASELGTIKVVWRDCALVGNEFKDDYRPYAAASSYKQANKTDAKHTGAAGAGAGEGEKFASTTRAGKVI 585
HK YI+ LF+ SY EY+E ++G E TQKWPV+P+ +A++ + ++ + VDGQ + + +P G + + +G + E LFSLPR+ + ++ D V S +G I+V +G+ + + QANK D G +G+ +TT+AGKV+
Sbjct: 84 HKYEVCYIESNLFTPFSYQQEYSEIIQG----ENETQKWPVTPFVIAIQGKTTVPQSYYRVFVDGQLVKKMSIPQGKTRLVKGFRDGNNCVEFLFSLPRFCRGEDDKL----TTDKV-SRVGLIEVECYRAVKMGSFVTRRKKDLL----FDQANKKDCL-------GVTQGQYLMATTKAGKVL 248 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7237.15425.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 7
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7237.15425.1 >prot_E_fasciculatus_S2_contig7237.15425.1 ID=prot_E_fasciculatus_S2_contig7237.15425.1|Name=mRNA_E_fasciculatus_S2_contig7237.15425.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=290bp QVAAQKLEEISHKDGKTYIQMMLFSKVSYGVEYTEEVKGLGAVECNTQKWback to top mRNA from alignment at E_fasciculatus_S2_contig7237:2801..7210- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7237.15425.1 ID=mRNA_E_fasciculatus_S2_contig7237.15425.1|Name=mRNA_E_fasciculatus_S2_contig7237.15425.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4410bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7237:2801..7210- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7237:2801..7210- >mRNA_E_fasciculatus_S2_contig7237.15425.1 ID=mRNA_E_fasciculatus_S2_contig7237.15425.1|Name=mRNA_E_fasciculatus_S2_contig7237.15425.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=870bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7237:2801..7210- (Ectocarpus fasciculatus EfasUO2)back to top |