mRNA_E_fasciculatus_S2_contig7230.15417.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZP2_9PHAE) HSP 1 Score: 833 bits (2152), Expect = 1.440e-292 Identity = 426/570 (74.74%), Postives = 464/570 (81.40%), Query Frame = 1
Query: 496 LLVSRVSSSC*KYCRY---AIYASSIAYGARTLVVSVYCLTTRTDTALLQGSPL*KLPRHTPT----SSTAMAAETIMAAHCLDSIDVPPVMLKVPEDADYFELAQKITAALQSYRGKDGEEVYVKQVLHGGFDQRLDHLEPTPRGFYTFSGEPVLFRLGPKKQMNVSIQTPDGKTLQLVISTNDTTTDVKQKIQYRDSEGIIPLDQQHLLHTCKQMDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREESAPLSQ 2184
L +S SSS + C+ ASS+++GA L A LQG PL KLP+HTPT + +TI+AAHCLDSID+PP+MLKVPEDADYFELAQKIT ALQSYR KDGEEV+VKQVLHGGFDQ LD E TPRGFYTFSGEPVLFRLGPKKQMNV +QTPDGKTLQLVISTND+TTDVK+KIQ+ SEGIIPLD+Q LL+T + MDDL TVSE+KIK+GDTL LI+ S GGWA PPS I VKTLTGKT+ LVVGSYNTI ++KQ +QD EGIPPD+QRLIFA QLEDG T+S+Y+IQ STLHLVLRLRGGG+ PPIAVGAKF DVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCT+S CDAHGRMVILNHG +DFDL+R GRDPKRCPMC EVVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAG SYHRF GE VEWDRLLIQARPLLKLEQRVPSAPPADER ERPNT A + TSTVA VIDHTWGRC SAFGAT +SDETVL+CGHRFH CL GWEQ SMIVCPICREES PL Q
Sbjct: 30 LALSTSSSSAARSCKTINKGQLASSVSWGAHRLA-----------DAALQGPPLTKLPKHTPTERHNNGPRAPLQTIVAAHCLDSIDLPPLMLKVPEDADYFELAQKITGALQSYRDKDGEEVFVKQVLHGGFDQSLDRPELTPRGFYTFSGEPVLFRLGPKKQMNVFVQTPDGKTLQLVISTNDSTTDVKKKIQH--SEGIIPLDRQRLLYTNQMMDDLLTVSEYKIKEGDTLHLIQRVSGGGWASPPSCGEYVIFVKTLTGKTVKLVVGSYNTIADIKQMMQDMEGIPPDQQRLIFAGVQLEDGLTISFYNIQGNSTLHLVLRLRGGGFAAPPIAVGAKFVDVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTNSDCDAHGRMVILNHGLRDFDLIRPGRDPKRCPMCNFEVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFDGRGE-VEWDRLLIQARPLLKLEQRVPSAPPADERVERPNTTAISATSTVADVIDHTWGRCXXXXXXSAFGATSASDETVLDCGHRFHTRCLTGWEQGSMIVCPICREESWPLPQ 585
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: RING-type (domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G3U0_ECTSI) HSP 1 Score: 357 bits (915), Expect = 6.880e-113 Identity = 168/203 (82.76%), Postives = 176/203 (86.70%), Query Frame = 1
Query: 1576 PGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREESAPLSQ 2184
P LCLEGRCT+ CDAHGRMVILNH F+DFDL+R GRDPKRCPMC EVVPSTC FTDCTWRYKGRKAGETNVLVGMWKEAG SYHRF+E GE V+WDRLLIQ RPLLKLEQRVPSAPPADER ERPNT A T TSTVAVVIDHTW RCT SAFGAT +SDETVL+CGHRFH CLAGWEQ SMIVCPICREES+PL Q
Sbjct: 18 PRLCLEGRCTNRQCDAHGRMVILNHAFRDFDLIRPGRDPKRCPMCNREVVPSTCAFTDCTWRYKGRKAGETNVLVGMWKEAGDSYHRFEEGGE-VQWDRLLIQVRPLLKLEQRVPSAPPADERMERPNTTANTATSTVAVVIDHTWSRCTXXXXXSAFGATPASDETVLDCGHRFHTRCLAGWEQGSMIVCPICREESSPLPQ 219
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Ubiquitin (family protein n=1 Tax=Phytophthora megakarya TaxID=4795 RepID=A0A225VQY5_9STRA) HSP 1 Score: 234 bits (596), Expect = 5.360e-65 Identity = 134/323 (41.49%), Postives = 179/323 (55.42%), Query Frame = 1
Query: 1216 PPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKEDGEE--VEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQ-----DSMIVCPICR 2160
P ++ FI +KTLTGKTL + S ++ID VKQKIQD++G PPD+QRLIFA + LEDG TL Y I GS++ VLRLRGGG P+ FADVSD+S L EH FS +AP+WR GL +EGRC + C A G+M+I + F F+LMR R CPMC +V P TCGF DC W++ G ++ + + WK+A G YHRF D + VEWD LLI +P + A PA + + + + T+ C C + T++ + C H FH C+ W Q DS+ CP+CR
Sbjct: 67 PLNMAAAFIYIKTLTGKTLKIHCTSTDSIDNVKQKIQDQDGTPPDQQRLIFAGKHLEDGRTLGDYGIFHGSSVCQVLRLRGGG---GPLT-SMYFADVSDNSILREHTFSTNAPQWRSCGKGLNIEGRCENRGCPAFGKMIIYPNRFNPFNLMRGDR--AHCPMCGDDVKPLTCGFYDCVWKFDGIRSSDGFSISSPWKDASGEKYHRFDADEKHGSVEWDSLLIMVKPRGEAASAKIIASPAIHQVNASTSDSEQESETI-------------CPICWSIAETVAGETITTHCEHTFHTSCIQEWAQWCSRHDSLPSCPVCR 370
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FKZ7_ECTSI) HSP 1 Score: 220 bits (561), Expect = 3.970e-60 Identity = 131/331 (39.58%), Postives = 176/331 (53.17%), Query Frame = 1
Query: 1207 WACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTL--------HLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQD-SMIVCPICREESA 2172
WA P + + I ++TLTGKT+F+ V S +T+ +VK IQD EGIP ++Q LIF +++ED TL Y +Q L HLVLR+RGGG FADVS+ + + S P+WR PGLC+EG C + CDA G+MVI G++DF+L+ P CP+C V P TC F C WRY G+K G + V+ W Y RF + V+WD LLIQARPL ++ T T+TV V ID+T+ CT C D G VL CGH FH +C+ GW + + +VCP CR++ A
Sbjct: 77 WARPNTRQ---IGIRTLTGKTIFIDVSSSSTLGDVKGLIQDDEGIPSEQQHLIFNGKEMEDVNTLIDYGVQPIDPLDYDVKNLVHLVLRIRGGGXXXXX-----DFADVSNPNTMQTLQVSRGGPKWRRIRPGLCIEGMCRNERCDARGQMVISPRGYKDFNLVAGETVP--CPVCDEGVEPKTCAFYQCMWRYVGKKDGISTVMSSSWGRVTDKYTRFSGK-KVVKWDHLLIQARPLDLVKP------------------VNTTTNTVRVHIDYTYLECTICIDDIERGQKT----IVLTCGHHFHAKCIRGWAKGGTKVVCPNCRQKCA 374
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3GVD8_9STRA) HSP 1 Score: 218 bits (556), Expect = 4.810e-59 Identity = 125/319 (39.18%), Postives = 174/319 (54.55%), Query Frame = 1
Query: 1234 MFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKEDGEE--VEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDC-SAFGATLSSDETVLECGHRFHIECLAGWEQ-----DSMIVCPICRE 2163
+ +++K+LTGK ++ID VK +IQDK GIPPD+QRLI A QL+DG LS Y I+ GS L + LRLRGGG PP V F DVSD+S LTE + S+ AP WRV + GL +EG C + C+A G+MVI +GF F+LM G CP C P TCGF C W+++G ++ + + W+ AG S YHRF D VEW+ LLI + R +T P +T ++++ + C+ C S FG+T + +CGH FH EC+ W + D++ CP+CR+
Sbjct: 118 LVLTIKSLTGKIAIFCAMPSDSIDNVKLRIQDKWGIPPDQQRLICAGVQLQDGRALSDYKIKTGSELLVFLRLRGGGGPRPPRKV---FVDVSDNSNLTEQSLSNEAPDWRVCDEGLNIEGECENRECEAFGQMVIYQYGFDSFNLM--GDRDVECPKCYETFTPITCGFYKCVWKFEGVRSSDGYFISSPWQNAGESKYHRFDSDENSGSVEWNSLLIVV------------------KSRRESTAVKIPATTRSMIVR----KDNVCSICWSRFGSTAKRTMSTAKCGHTFHRECINKWSEWCSSHDALPSCPLCRQ 409
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Ubiquitin (n=1 Tax=Pandoravirus salinus TaxID=1349410 RepID=S4W648_9VIRU) HSP 1 Score: 223 bits (568), Expect = 1.500e-58 Identity = 129/349 (36.96%), Postives = 181/349 (51.86%), Query Frame = 1
Query: 1123 MDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKED-GEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREE 2166
+D+ +T EH I+ G L ++ P + V+TLTGK + + N+I+E+K I DKEG+PPD+QRL++A +Q+EDG L+ Y I+ +++HLVLRLRGGG PP A F D+ ++ + +S AP WR+ +PGLC+EGRC + C A+GRMVI+N GF FDL+ D CP C V P TC F +C W++ G K G++ G W A +YH F ED VEW RLLI+AR + K+ + + P + D C C + S VL+CGH FH C+ W S CP CR +
Sbjct: 315 LDEDKTWVEHGIEAGTWLSIV----------PKPSRSFQLFVQTLTGKVITIEAAPANSIEEIKCIIHDKEGLPPDQQRLLYAGQQMEDGRRLADYAIRAEASMHLVLRLRGGGGGPP---ASATFVDMENTGAMQCRQWSKSAPDWRIVKPGLCIEGRCKNVGCAAYGRMVIVNKGFDTFDLLLDA-DTCACPECDKHVKPKTCAFNNCWWKWNGIKEGDSRKYAGKWTLADDNYHCFAEDEAGSVEWTRLLIRARSIPKVAKSGGNEP-------------------IGKPFDMF------CCICIS-SINSSGVHKVLDCGHAFHSPCIDAWVARSP-TCPHCRHK 622
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=5 Tax=Phytophthora TaxID=4783 RepID=A0A6A3IE52_9STRA) HSP 1 Score: 214 bits (546), Expect = 6.190e-58 Identity = 132/314 (42.04%), Postives = 167/314 (53.18%), Query Frame = 1
Query: 1240 ISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKED--GEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWE-----QDSMIVCPIC 2157
I +KTLTGKT + + NTI+E+K IQ++EGIPPD+QR+IFA +QLEDG LS Y+IQ GSTLHLVLRLRGG Y P FADVSD S EH FS AP WR+ GL +EGRC + C A+ +VI GF+ F+L + G CP CRS+V P TCGF DC W+++G KA W+ G Y RF D +EW+ LLI +PL + A A+ E R H+ C C + LS ECGH FH C+ W Q ++ CP+C
Sbjct: 104 IYIKTLTGKTTHVNCHAANTIEEIKYDIQEQEGIPPDQQRIIFAGKQLEDGRKLSDYNIQYGSTLHLVLRLRGG-YVEPRC-----FADVSDGSISVEHEFSRTAPEWRICRKGLNIEGRCMNRTCIAYHELVIHPAGFEMFNLRKDG--DVTCPKCRSKVKPVTCGFYDCAWKFEGVKARGGFFTSSPWQIVSGEKYQRFDADETSGSIEWESLLILVKPLKE-------AVAAELVESAQEARL------------HSDLVCAVC-----WTEILSGSGAGSECGHLFHCGCIENWSKWSEGQKTLTKCPVC 385
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Putative (ring and ubiquitin domain containing protein n=1 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4VNX4_9EUKA) HSP 1 Score: 216 bits (550), Expect = 2.030e-56 Identity = 141/372 (37.90%), Postives = 196/372 (52.69%), Query Frame = 1
Query: 1063 RDSEGIIPLDQQHLLHTCKQMDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGR-MVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGM--WKEAGGSYHRFKE-DGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQDSMIVCPICREE 2166
++ EG+ P DQ L ++ RT+ ++ +++ DTL+L +L M I +KTLTGKT+ L V + NTI+E+K IQDKEGIPP++QRLIFA +QLEDG L+ Y I K +TLHLVLRLRGGG F DV S L + +S AP+WR G+ +EGRC +S C AH R MVI N GF DFDL+R + CPMC S + GF +C WR RK TN ++ WK+AG Y + E ++ RL++ A+ L +D RE+ + +T V G C C + + V++C H FH C+ W+ DS + CP C+E+
Sbjct: 263 KEKEGLSP-DQYRLFSEYSKIRQDRTIQDYGLEELDTLELYKLGI-----------SMKIFIKTLTGKTIALQVQNDNTIEEIKSLIQDKEGIPPEQQRLIFAGKQLEDGYLLADYKILKEATLHLVLRLRGGGEA-------MNFVDVERSDALIQRQWSKTAPQWRCVSRGMAIEGRCDNSSCQAHNRGMVIFNVGFSDFDLLR---NESHCPMCYSRIKGIKPGFNNCIWRIDFRK---TNGIISRLKWKKAGDEYTTYDEAQAGTADFTRLIMHAKQL------------SDTREQTIVSEGKEMKTTFIV-----GGSCGLCHEDK--NDERDKNVIVMKCSHNFHKVCIKIWK-DSGLKCPHCKED 589
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Putative (ring and ubiquitin domain containing protein (Fragment) n=2 Tax=Streblomastix strix TaxID=222440 RepID=A0A5J4WRA2_9EUKA) HSP 1 Score: 207 bits (526), Expect = 2.260e-54 Identity = 143/409 (34.96%), Postives = 206/409 (50.37%), Query Frame = 1
Query: 967 MNVSIQTPDGKTLQLVISTNDTTTDVKQKIQYRDSEGI--IPLDQQHLLHTCKQMDDLRTVSEHKIKDGDTLQLIRLCSRGGWACPPSLEHMFISVKTLTGKTLFLVVGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGSYHRFKE-DGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETV-LECGHRFHIECLAGWEQDSMIVCPICREESAPLS 2181
M + I+T KTL L ++++D KQ IQ GI I +++Q L+ K++ D + + + I+ G TL L++ GG M I +KTLT KT+ L V S + I VKQ+I DKE IP ++Q+LIFA ++LED TL Y+IQ+ STLHL+ RL GGG F DV + L + +S AP WR+A GLC+EG C + C+A G+MVI + GF DFDL + CPMC + P F +C +R +KA + WK+AG Y+ + E V++ RL+I + L + S + E E V + G C + D T D TV + CGH FH C+A W++ + CPIC + L+
Sbjct: 94 MQIFIKTLQNKTLTLNVNSDDQIISAKQLIQ-----GISGISVNEQRLIFAGKELTDDQKLCDCNIQSGKTLLLLQRLIVGGKV------EMQIYIKTLTQKTVTLQVRSDDQIISVKQQIVDKEHIPVEQQKLIFAGKELEDQLTLRDYNIQRDSTLHLIARLTGGG-------ASMSFVDVERTDALVQKKWSTSAPDWRLASKGLCIEGICENEGCEAKGQMVIFSAGFTDFDLELSVAN---CPMCHNPFKPIKPAFNNCMYRIDFQKANGAVTKI-PWKKAGDEYNTYDEKQAGIVDYTRLIIHTKVLAAGRENTDSKGKSAELE--------------TVTVSKVCGICHKMLD-----VTYGRDPTVVMNCGHSFHGGCVASWKERGL-DCPICEDPIKELA 460
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZEG5_9STRA) HSP 1 Score: 204 bits (519), Expect = 1.170e-53 Identity = 128/322 (39.75%), Postives = 167/322 (51.86%), Query Frame = 1
Query: 1210 ACPPSLEHMFISVKTLTGKTLFLV-VGSYNTIDEVKQKIQDKEGIPPDEQRLIFASRQLEDGCTLSYYDIQKGSTLHLVLRLRGGGYCPPPIAVGAKFADVSDSSGLTEHAFSDHAPRWRVAEPGLCLEGRCTSSYCDAHGRMVILNHGFQDFDLMRQGRDPKRCPMCRSEVVPSTCGFTDCTWRYKGRKAGETNVLVGMWKEAGGS-YHRFKEDGEEVEWDRLLIQARPLLKLEQRVPSAPPADEREERPNTRATTPTSTVAVVIDHTWGRCTRCTDCSAFGATLSSDETVLECGHRFHIECLAGWEQ---DSMIVCPICR 2160
A P I VKTL G++L L V +T+D +K +I D EGIP D+QRLIFA +QLED T+ Y +++ STLHLVLRLRGGG P + +FADVS+ + +FS APRWR GL +EG C + C A G +VI G F L + CPMC S + P TCGF C W Y G K + ++ G W+ AG Y RF+E W RL++ A+P +K++ P A AD + + A+ P AV + GR S T CGHR+H CLAGW + S CP CR
Sbjct: 146 AAPGPQGSRAIYVKTLRGQSLPLSGVLPCDTVDILKDRISDCEGIPADQQRLIFAGKQLEDSRTVDDYSMERDSTLHLVLRLRGGGCGPSSL----QFADVSNDGAIERRSFSQDAPRWRTVRRGLNMEGYCRDARCKARGALVIAPIGMAAFPLGSRCT----CPMCGSAITPVTCGFNACAWTYDGAKE-DGELVRGAWRTAGDDKYERFRESDNMATWSRLVLVAKPAVKVKSD-PGAAVADAVDNKEAAGASEPDE-CAVGLRGFGGR--------------SGAVTTTRCGHRYHALCLAGWRECSHASCSKCPTCR 442 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7230.15417.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7230.15417.1 >prot_E_fasciculatus_S2_contig7230.15417.1 ID=prot_E_fasciculatus_S2_contig7230.15417.1|Name=mRNA_E_fasciculatus_S2_contig7230.15417.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=500bp MAAETIMAAHCLDSIDVPPVMLKVPEDADYFELAQKITAALQSYRGKDGEback to top mRNA from alignment at E_fasciculatus_S2_contig7230:954..5625- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7230.15417.1 ID=mRNA_E_fasciculatus_S2_contig7230.15417.1|Name=mRNA_E_fasciculatus_S2_contig7230.15417.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=4672bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7230:954..5625- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7230:954..5625- >mRNA_E_fasciculatus_S2_contig7230.15417.1 ID=mRNA_E_fasciculatus_S2_contig7230.15417.1|Name=mRNA_E_fasciculatus_S2_contig7230.15417.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1500bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7230:954..5625- (Ectocarpus fasciculatus EfasUO2)back to top |