mRNA_E_fasciculatus_S2_contig7226.15407.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig7226.15407.1
Unique NamemRNA_E_fasciculatus_S2_contig7226.15407.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G6Z6_ECTSI)

HSP 1 Score: 537 bits (1383), Expect = 1.200e-183
Identity = 285/299 (95.32%), Postives = 291/299 (97.32%), Query Frame = 1
Query:    1 CF-LTLRYAKMRRASGIGSPSPALGYGANRIGSMEGGGSMMDPEAASAGTAFGTGPPKKSRFSPAYPRLPVKTAPGLAATAVAALLLLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            CF LTLRYAKMRRA+G+GSPS ALGYGANRIGSMEGGGS+MDPEAASAGTAFGTG  KKSRFSPAY RLPVKTAPGLAATAVA LLLLL MPSG KP+ILVMGCCSAGILVTGWL+DSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQ+G
Sbjct:   29 CFSLTLRYAKMRRAAGVGSPSLALGYGANRIGSMEGGGSIMDPEAASAGTAFGTGAAKKSRFSPAYHRLPVKTAPGLAATAVATLLLLLLMPSGTKPIILVMGCCSAGILVTGWLSDSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQLG 327          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNP5_9PHAE)

HSP 1 Score: 369 bits (947), Expect = 6.930e-123
Identity = 193/209 (92.34%), Postives = 197/209 (94.26%), Query Frame = 1
Query:  268 MPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            MPSGAKP+ILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIK          YTAIAKIAVFLL FIVMSYVLRPTGSSE+QN GVRR+GNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQ+G
Sbjct:    1 MPSGAKPIILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIK----------YTAIAKIAVFLLVFIVMSYVLRPTGSSEVQNAGVRRVGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQLG 199          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase (Fragment) n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A4YUH2_9STRA)

HSP 1 Score: 246 bits (629), Expect = 2.360e-76
Identity = 138/225 (61.33%), Postives = 173/225 (76.89%), Query Frame = 1
Query:  220 PGLAATAVAALLLLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            P LA TAV  + LL    S  +P++LV+  C  G + + +L+  VLSKDDGTP MR VS PI+EGAEGFL++QYTAI++IAV L   I  SY LRP   + L  +GV ++GNTTLG++    F +GA+CSAAAGYISMWVSA +NIRVASAARR YGEAL+ICFRGGAFSAVLDITLCVAGV++LYV L+  +    +++ T++P+LMVGYGFGASFVALFMQ+G
Sbjct:   39 PILAITAVGVIFLL--FTSSFRPIVLVLTFCGYGAVFSLYLSHWVLSKDDGTPEMREVSIPIREGAEGFLRIQYTAISQIAVGLALLIFFSYSLRP---NSLHPSGVEKLGNTTLGVLGAISFALGAMCSAAAGYISMWVSAQSNIRVASAARRSYGEALLICFRGGAFSAVLDITLCVAGVSILYVLLHAAFTP--IVNATEIPMLMVGYGFGASFVALFMQLG 256          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XQF5_9STRA)

HSP 1 Score: 255 bits (652), Expect = 1.930e-75
Identity = 138/214 (64.49%), Postives = 166/214 (77.57%), Query Frame = 1
Query:  253 LLLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            LLLL +    +PV+LV   C  G L + +L+  VLSKDDGTP MR VS+PI+EGAEGFL++QYTAIA+IAV +   I  SY LRPT +     +GV ++GN TLG++    F++GA+CSA AGYI+MWVSA ANIRV SAARR YGEAL+ICFRGGAFSAVLDITLCVAGVT LYV LYT + A   L+ TD+P+LMVGYGFGASFVALFMQ+G
Sbjct:   70 LLLLLISGEFRPVVLVFTICGYGALFSLYLSHWVLSKDDGTPEMREVSNPIREGAEGFLRIQYTAIARIAVGIAGLIFFSYALRPTSALA---SGVEKLGNVTLGVLGALSFIIGAVCSAGAGYIAMWVSAQANIRVTSAARRSYGEALLICFRGGAFSAVLDITLCVAGVTALYVTLYTMFSAT--LEATDIPLLMVGYGFGASFVALFMQLG 278          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3X000_GLOUD)

HSP 1 Score: 249 bits (637), Expect = 2.970e-73
Identity = 134/214 (62.62%), Postives = 165/214 (77.10%), Query Frame = 1
Query:  253 LLLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            LL L   S  +P+ LV+  C  G L + +L++ VL+KDDGTP MR VS PI+EGAEGFL++QYTAIA+IAV +   I  SY LRPT +     +GV ++GN TLG++    FL+GA+CSAAAGYISMWVSA +NIRVASAARR YGEAL+ICFRGGAFSAVLDITLCVAGV++LY  +Y  +     L+ TD+P+LMVGYGFGASFVALFMQ+G
Sbjct:   76 LLFLLFSSDFRPIFLVLTICGYGTLFSFYLSNWVLAKDDGTPEMREVSIPIREGAEGFLRIQYTAIARIAVGIAGLIFFSYALRPTSALA---SGVEKLGNITLGVLCAISFLIGAICSAAAGYISMWVSAQSNIRVASAARRSYGEALLICFRGGAFSAVLDITLCVAGVSILYGTMYILF--SSTLEPTDIPLLMVGYGFGASFVALFMQLG 284          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7T9J2_9STRA)

HSP 1 Score: 249 bits (637), Expect = 1.050e-72
Identity = 133/229 (58.08%), Postives = 168/229 (73.36%), Query Frame = 1
Query:  208 VKTAPGLAATAVAALLLLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            V   P  +   +A LL  + +P+  +  + ++  C+ G L   WL+  VLSKDDG+  MRAV+ PI+EGAEGFL+VQY+AIAKIAV L   I +SY++RP G     N GV ++GNT LGL+    F++GALCSAAAGY+SMWV+AH N+RV SAARR Y +AL++CF GGAFSAVLDITLCVAGVT LY+ LY  +V  GVL   +VP+LMVGYGFGASFVALFMQ+G
Sbjct:  164 VNVGPTASFICLAGLLCFIVLPANFRCAVFILTICALGTLFAFWLSRFVLSKDDGSAEMRAVATPIREGAEGFLRVQYSAIAKIAVVLSILITLSYMMRPEGGGG--NHGVGKLGNTMLGLLGSISFILGALCSAAAGYLSMWVAAHTNVRVTSAARRSYMQALIVCFNGGAFSAVLDITLCVAGVTCLYLGLYLVFVPAGVLHAGEVPMLMVGYGFGASFVALFMQLG 390          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: Uncharacterized (protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CNE4_PYTOL)

HSP 1 Score: 244 bits (623), Expect = 1.990e-71
Identity = 143/244 (58.61%), Postives = 179/244 (73.36%), Query Frame = 1
Query:  163 PPKKSRFSPAYPRLPVKTAPGLAATAVAALLLLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            P   ++ + AY R      P +A +A+ A+ LL    S  +P+ LV+  C  G L + +L+  VLSKDDGTP MR VS+PI+EGAEGFL++QYTAI++IAV +   I  SY LRP  SS L + GV  +GN TLG++    F++GA+CSAAAGYISMWVSA +NIRV SAARR YGEAL+ICFRGGAFSAVLDITLCVAGV++LYV LY  + +   L  TD+P+LMVGYGFGASFVALFMQ+G
Sbjct:   18 PSGANKAAHAYARKIDVQKPFIAISALGAVFLL--FSSDFRPIFLVLTFCGYGALFSFYLSHWVLSKDDGTPEMREVSNPIREGAEGFLRIQYTAISRIAVGIAGLIFFSYALRP--SSALAS-GVETLGNMTLGVLGSLSFVIGAVCSAAAGYISMWVSAQSNIRVTSAARRSYGEALLICFRGGAFSAVLDITLCVAGVSILYVVLYVMFGSYVAL--TDIPMLMVGYGFGASFVALFMQLG 254          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase n=17 Tax=Aphanomyces TaxID=100860 RepID=A0A485LV04_9STRA)

HSP 1 Score: 243 bits (620), Expect = 5.020e-71
Identity = 131/214 (61.21%), Postives = 164/214 (76.64%), Query Frame = 1
Query:  253 LLLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            LL  F+    +P++LV   C  G + + +L + VLSKDDGTP MR VS PI+EGAEGFL++QYTAI++IAV L A I  SY LRP   + +  +GV ++GNT LG++    F +GA+CSA AGYISMWVSA +NIRVASAARR YGEAL+ICFRGGAFSAVLDITLCVAGV+LLYV L+  +    ++  T++P+LMVGYGFGASFVALFMQ+G
Sbjct:   47 LLFFFLADSFRPIVLVFTFCGYGAVFSLYLCNWVLSKDDGTPEMREVSTPIREGAEGFLRIQYTAISQIAVGLAALIFFSYSLRP---NSVHASGVEKLGNTMLGVLGAISFALGAVCSAGAGYISMWVSAQSNIRVASAARRSYGEALLICFRGGAFSAVLDITLCVAGVSLLYVLLHAAFTP--IVHATEIPMLMVGYGFGASFVALFMQLG 255          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BX10_HYAAE)

HSP 1 Score: 243 bits (619), Expect = 8.370e-71
Identity = 132/213 (61.97%), Postives = 160/213 (75.12%), Query Frame = 1
Query:  256 LLLFMPSGAKPVILVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            LLL      +P+ LV   C  G + + +L+  VLSKD GT  M+ V+ PI++GAEGFLK+QYTAIA+IAV +   I +SY LRP   S   ++GV  +GN TLGL+S   FL+GALCSAAAGY+SMWVSA +NIRVASAARR YGEAL++CFRGGAFSAVLDITLCV GVT LYV LY  +    +L  T+VP+LMVGYGFGASFVALFMQ+G
Sbjct:   59 LLLLFGGSFRPIFLVFAICGYGAVFSLYLSHWVLSKDSGTVEMKEVAMPIRQGAEGFLKIQYTAIARIAVAIAGLIFLSYTLRP---SNTLSSGVETLGNITLGLVSSVAFLIGALCSAAAGYVSMWVSARSNIRVASAARRSYGEALLVCFRGGAFSAVLDITLCVGGVTSLYVILYVLF--GSLLRPTEVPLLMVGYGFGASFVALFMQLG 266          
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Match: H(+)-exporting (diphosphatase (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FUG0_PHATC)

HSP 1 Score: 240 bits (612), Expect = 3.440e-70
Identity = 125/200 (62.50%), Postives = 154/200 (77.00%), Query Frame = 1
Query:  295 LVMGCCSAGILVTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLAFIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYISMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLYVALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG 894
            LV G C  G + + WL+ +VL  DDGTP MRAVSDPI+EGAEGFL+VQYT+IAK AV L A IV SY  RP    + +  G+  +GNT LG+++   F+ GALCSA +GY+SMWV+A +NIRVASAARR YGEALV+CFRGGAFSAVL++TLC+ GVT LY  L T +V    L+ TD+P+L+VGYGFGASFVALFMQ+G
Sbjct:   26 LVFGSCGFGAIASLWLSRAVLQCDDGTPEMRAVSDPIREGAEGFLRVQYTSIAKFAVPLAALIVFSYQFRPLHPHDAKGVGL--LGNTLLGVVAAVGFVFGALCSALSGYVSMWVAAQSNIRVASAARRTYGEALVVCFRGGAFSAVLNLTLCIVGVTTLYTMLSTVFVNAAGLESTDIPMLLVGYGFGASFVALFMQLG 223          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7226.15407.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
H(+)-exporting1.200e-18395.32diphosphatase n=1 Tax=Ectocarpus siliculosus TaxID... [more]
H(+)-exporting6.930e-12392.34diphosphatase n=1 Tax=Ectocarpus sp. CCAP 1310/34 ... [more]
H(+)-exporting2.360e-7661.33diphosphatase (Fragment) n=1 Tax=Aphanomyces astac... [more]
H(+)-exporting1.930e-7564.49diphosphatase n=1 Tax=Pythium brassicum TaxID=1485... [more]
H(+)-exporting2.970e-7362.62diphosphatase n=1 Tax=Globisporangium ultimum (str... [more]
H(+)-exporting1.050e-7258.08diphosphatase n=2 Tax=Monodopsidaceae TaxID=425072... [more]
Uncharacterized1.990e-7158.61protein n=1 Tax=Pythium oligandrum TaxID=41045 Rep... [more]
H(+)-exporting5.020e-7161.21diphosphatase n=17 Tax=Aphanomyces TaxID=100860 Re... [more]
H(+)-exporting8.370e-7161.97diphosphatase n=1 Tax=Hyaloperonospora arabidopsid... [more]
H(+)-exporting3.440e-7062.50diphosphatase (Fragment) n=1 Tax=Phaeodactylum tri... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7226contigE_fasciculatus_S2_contig7226:5164..7325 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score521.2
Seed ortholog evalue3.2e-145
Seed eggNOG ortholog2880.D7G6Z6
Model size894
KEGG koko:K01507
KEGG Pathwayko00190,map00190
Hectar predicted targeting categorysignal anchor
Exons4
EggNOG free text desc.hydrogen-translocating pyrophosphatase activity
EggNOG OGs2QPJC@2759,COG3808@1
Ec32 ortholog descriptionvacuolar-type H -translocating inorganic pyrophosphatase
Ec32 orthologEc-01_011640.1
EC3.6.1.1
Cds size867
COG Functional cat.C
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842385.9380534-UTR-E_fasciculatus_S2_contig7226:5163..51901696842385.9380534-UTR-E_fasciculatus_S2_contig7226:5163..5190Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig7226 5164..5190 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842385.9529283-CDS-E_fasciculatus_S2_contig7226:5190..53371696842385.9529283-CDS-E_fasciculatus_S2_contig7226:5190..5337Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7226 5191..5337 +
1696842385.9642284-CDS-E_fasciculatus_S2_contig7226:6018..62521696842385.9642284-CDS-E_fasciculatus_S2_contig7226:6018..6252Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7226 6019..6252 +
1696842385.9753206-CDS-E_fasciculatus_S2_contig7226:6589..68131696842385.9753206-CDS-E_fasciculatus_S2_contig7226:6589..6813Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7226 6590..6813 +
1696842385.9862826-CDS-E_fasciculatus_S2_contig7226:7063..73251696842385.9862826-CDS-E_fasciculatus_S2_contig7226:7063..7325Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig7226 7064..7325 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7226.15407.1prot_E_fasciculatus_S2_contig7226.15407.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig7226 5191..7325 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig7226.15407.1

>prot_E_fasciculatus_S2_contig7226.15407.1 ID=prot_E_fasciculatus_S2_contig7226.15407.1|Name=mRNA_E_fasciculatus_S2_contig7226.15407.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=289bp
MRRASGIGSPSPALGYGANRIGSMEGGGSMMDPEAASAGTAFGTGPPKKS
RFSPAYPRLPVKTAPGLAATAVAALLLLLFMPSGAKPVILVMGCCSAGIL
VTGWLADSVLSKDDGTPAMRAVSDPIKEGAEGFLKVQYTAIAKIAVFLLA
FIVMSYVLRPTGSSELQNTGVRRIGNTTLGLISGACFLVGALCSAAAGYI
SMWVSAHANIRVASAARRGYGEALVICFRGGAFSAVLDITLCVAGVTLLY
VALYTWYVARGVLDDTDVPVLMVGYGFGASFVALFMQVG
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mRNA from alignment at E_fasciculatus_S2_contig7226:5164..7325+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig7226.15407.1 ID=mRNA_E_fasciculatus_S2_contig7226.15407.1|Name=mRNA_E_fasciculatus_S2_contig7226.15407.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2162bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7226:5164..7325+ (Ectocarpus fasciculatus EfasUO2)
TGCTTTCTGACCTTGCGCTACGCCAAGATGAGACGGGCCTCGGGGATCGG TTCTCCTAGCCCGGCGCTTGGTTATGGTGCGAATCGCATCGGCAGCATGG AGGGAGGAGGGAGCATGATGGATCCGGAGGCTGCCTCTGCTGGCACCGCT TTCGGCACCGGCCCTCCGAAGAAGGTGTGGGTACAGCAGTAGTAGTAGCA CACCCGCCGGCTTAACGGCCGGGCTGCCAAGCTGGCATTACGATTTCCTG TGTGCCAGCGTGTTGTTGTGGTCGTCGCACGGCCTGGGCGTTGTGCTCCG CCGATAGTCCGCACATCGAGATGTGTAAGATGGGAGATGGAACAAGACGT TTTCCGAGCGGGGTGATCGACATGAGTACCATGGTCGGCACCGCCGTACC GGTTTGGTTCAGCTCTCTCGCCGATGTACGCATGCTCCACGACTCACACA CGCCTTGCATCCGACCCCCACAGATGGCAGCTTCGCCTGCAGTGCCCTGA CAAGAGGTGCCGGACTGTGTTGCCCTCGTTTTGCACGCACAATATGAGCG ACCTGATGCTCAGCATTTATGGGGCAAAGATAGGAGATACTCCGCGAATG AGTCCCCACAATGAGCATCGAACTATGTACTTGCTGTATGCATCTACAGG ACAATGATCTTCAGCAACGGTTCTGCCTATCGTCCAGCAGTCCTGCCCAC GACCAATAAATAAAAATCACCTAAGATTGACAAAGGTCCTCCACAGCGTT AGTGCCTAGTACTACGGCTCCTGTTGTTGTCGGGGAAGCAGACCCCTTCT CCGCCCTCATGTTGCTCACAGCCGGCCCCTACCCCCGCCCCCCCTCTCTA CCCAGTCGAGATTCTCGCCGGCCTATCCCAGGCTGCCAGTCAAGACGGCA CCGGGCCTAGCTGCAACGGCGGTGGCGGCTCTCCTTCTCTTGCTCTTCAT GCCCTCTGGAGCCAAGCCCGTCATTCTGGTGATGGGGTGCTGCAGCGCGG GAATCTTGGTAACCGGGTGGCTGGCGGATAGCGTGTTGAGCAAAGATGAT GGGACACCGGCCATGCGCGCCGTGTCGGACCCGATCAAGGTCAGTCAAGG AAGAATCAGAGCGTAGAGGCAGGGACTATGACAAGGGCGGGCCGTGTGGT GCAATAATCGCCATTGGGTTGGCTGTAATAGCTTGCGATAAATGTGCTTG GTTGTTGGTTGACGGAGATTGAAGGTCGGTTCTGCGCCGATGTACATCAC GCGGGCTTCGCGCCACAGGGTCTGTTTTTCCCCAATATTGTCCTACCACT GTTTTTTCGAGGATTGTGTTCAACAAGGTGTCTGCCGCCATCTCGTACTG CACCCACTCACCTAGCTGTCTCTTTCTCTCTCCGTGCACCTCGACTACTG TACGTGCGTGGTATGTGACCGAAAAGGAGGGAGCCGAAGGCTTCCTCAAG GTGCAGTACACGGCCATAGCAAAGATCGCCGTCTTCTTGCTTGCATTCAT CGTGATGAGCTACGTACTAAGACCGACGGGGTCTTCAGAGCTACAGAACA CCGGGGTGCGTCGGATCGGCAACACGACGCTGGGCCTGATCAGCGGGGCC TGTTTTCTCGTTGGAGCCTTGTGTTCCGCAGCGGCTGGGTACATCTCCAT GTGAGCACTTGTAGTTCCATCAAAAGAACGACGGGACTTGTCAACGTCCG ATTCTGAAATCAATCGTCCCGCCAGTATGTGCTTGTACGTTGCTCCAACC CACGCTGTCTCCGGTTGCTGAACTGCTGGCACGACTTCGTCGTATCTCAC GTATTGTATGTGCCATGAAAATGACCCAGTCTTCGGGTATTTATTGCTGC TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTATTGTTGACGACACAACAG GTGGGTCAGCGCACACGCTAACATCCGCGTAGCGAGCGCCGCTCGACGAG GGTACGGCGAGGCCTTAGTGATTTGCTTCCGCGGCGGCGCCTTCAGTGCC GTCCTGGACATCACGCTGTGCGTCGCGGGGGTGACGCTGCTGTACGTGGC CCTCTACACGTGGTACGTGGCGAGGGGGGTGCTGGACGACACCGATGTTC CCGTGCTGATGGTTGGCTACGGCTTCGGAGCGTCGTTTGTGGCGCTGTTC ATGCAGGTGGGT
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7226:5164..7325+

>mRNA_E_fasciculatus_S2_contig7226.15407.1 ID=mRNA_E_fasciculatus_S2_contig7226.15407.1|Name=mRNA_E_fasciculatus_S2_contig7226.15407.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=867bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7226:5164..7325+ (Ectocarpus fasciculatus EfasUO2)
ATGAGACGGGCCTCGGGGATCGGTTCTCCTAGCCCGGCGCTTGGTTATGG
TGCGAATCGCATCGGCAGCATGGAGGGAGGAGGGAGCATGATGGATCCGG
AGGCTGCCTCTGCTGGCACCGCTTTCGGCACCGGCCCTCCGAAGAAGTCG
AGATTCTCGCCGGCCTATCCCAGGCTGCCAGTCAAGACGGCACCGGGCCT
AGCTGCAACGGCGGTGGCGGCTCTCCTTCTCTTGCTCTTCATGCCCTCTG
GAGCCAAGCCCGTCATTCTGGTGATGGGGTGCTGCAGCGCGGGAATCTTG
GTAACCGGGTGGCTGGCGGATAGCGTGTTGAGCAAAGATGATGGGACACC
GGCCATGCGCGCCGTGTCGGACCCGATCAAGGAGGGAGCCGAAGGCTTCC
TCAAGGTGCAGTACACGGCCATAGCAAAGATCGCCGTCTTCTTGCTTGCA
TTCATCGTGATGAGCTACGTACTAAGACCGACGGGGTCTTCAGAGCTACA
GAACACCGGGGTGCGTCGGATCGGCAACACGACGCTGGGCCTGATCAGCG
GGGCCTGTTTTCTCGTTGGAGCCTTGTGTTCCGCAGCGGCTGGGTACATC
TCCATGTGGGTCAGCGCACACGCTAACATCCGCGTAGCGAGCGCCGCTCG
ACGAGGGTACGGCGAGGCCTTAGTGATTTGCTTCCGCGGCGGCGCCTTCA
GTGCCGTCCTGGACATCACGCTGTGCGTCGCGGGGGTGACGCTGCTGTAC
GTGGCCCTCTACACGTGGTACGTGGCGAGGGGGGTGCTGGACGACACCGA
TGTTCCCGTGCTGATGGTTGGCTACGGCTTCGGAGCGTCGTTTGTGGCGC
TGTTCATGCAGGTGGGT
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