mRNA_E_fasciculatus_S2_contig7212.15393.1 (mRNA) Ectocarpus fasciculatus EfasUO2
|
Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812TC40_SYMMI) HSP 1 Score: 121 bits (304), Expect = 2.720e-32 Identity = 64/137 (46.72%), Postives = 88/137 (64.23%), Query Frame = 1
Query: 13 NASLMYTTDPAMAT-KGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYY-NIIAPGNATEVDRCVYNHMSDSDECAERTPSAIKSVHFTQSCKKPWLCAR 417
N SL+YTTDP MA+ KG +PVQGGFL+++P L Y + I+ +G++R W G+ IG+F+GG TIQG+LAYYY N A + +DRC YN M+D+++CA + + IKS HFT C+KPW C R
Sbjct: 27 NKSLIYTTDPNMASHKGEDKMPVQGGFLVIKPSLTDYRRIVDIVV---------EGDYRGSAAWGGTKIGWFWGGRTIQGVLAYYYTNQTAAWRSVRLDRCRYNTMADTEKCAATSMNDIKSAHFTV-CQKPWNCLR 153
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Hypothetical (protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UJ30_9STRA) HSP 1 Score: 124 bits (311), Expect = 2.520e-31 Identity = 66/151 (43.71%), Postives = 89/151 (58.94%), Query Frame = 1
Query: 7 ESNASLMYTTDPAMATK---------GSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPG-----WRGSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDRCVYNHMSDSDECAERTPSAIKSVHFTQSCKKPWLCAR 417
E++ASL +T D M ++ G K P QGGFLLV P ++ YD L AII FR+G + PG W+G+ IGY++GG T+QGLL YYY + APG + EVD C YN+M D++EC +++ HFT C+KPW C R
Sbjct: 158 EADASLQFTYDMGMCSRCQKNATLEHGGKVPPYQGGFLLVSPSMKHYDALTAIIREGD----FREGGAKNAPGKKGIAWKGTRIGYYWGGRTVQGLLPYYYTVEAPGESLEVDMCAYNNMVDNEECQGVPVDYVQNAHFTV-CQKPWKCKR 303
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Hypothetical (protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3B9M4_9EUKA) HSP 1 Score: 118 bits (295), Expect = 1.030e-29 Identity = 65/133 (48.87%), Postives = 84/133 (63.16%), Query Frame = 1
Query: 19 SLMYTTDPAMATKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYNIIAPGNATEV-DRCVYNHM-SDSDECAERTPSAIKSVHFTQSCKKPWLC 411
SL+YT DPAMA K + ALP QGGFLL+ P++ + +EL II R+GN+R G GWR S IG+ YGGAT+QGLLAYYY +AP + + + D C YN M + C+ + S HFT C+KPW C
Sbjct: 64 SLVYTGDPAMAAKNAAALPAQGGFLLIAPNVTIREELLEII---------REGNFRGGGGWRDSRIGWGYGGATVQGLLAYYYKRVAPPSLSAMLDFCRYNRMLTHRFNCSGVAIDEVFSTHFTV-CQKPWTC 186
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XNK0_HETAK) HSP 1 Score: 110 bits (275), Expect = 2.480e-26 Identity = 56/115 (48.70%), Postives = 74/115 (64.35%), Query Frame = 1
Query: 76 VQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDRCVYNHMSDSDE---CAERTPSAIKSVHFTQSCKKPWLC 411
VQGGF+LVRP++ VY E +V FR G++R W GS IG+F+GG TIQG+++YYYN + G EVDRC+YN+M+D+ E C E +K VHFT C+KPW C
Sbjct: 166 VQGGFILVRPNIEVYKE---------YVEIFRVGDFRERGQWGGSGIGHFWGGVTIQGVVSYYYNYLHRGKGAEVDRCIYNNMADAPENGRCRETPLEQVKGVHFTV-CRKPWDC 270
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z761_9STRA) HSP 1 Score: 111 bits (277), Expect = 6.480e-26 Identity = 64/163 (39.26%), Postives = 81/163 (49.69%), Query Frame = 1
Query: 22 LMYTTDPAMATKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYN--------------IIAPGN-------------------ATEVDRCVYNHMSDSDECAERTPSAIKSVHFTQSCKKPWLC 411
L+YTTD MA +PVQGGFLL RP +DEL I+ ++G+W GW S IG+F+GG TIQGLLAYYY +++P + E DRC +NHM D+ EC + SVHFTQSC KPW+C
Sbjct: 214 LVYTTDVKMAPNAHN-MPVQGGFLLCRPSQATFDELVGIV---------KKGDWAPNVGWARSGIGFFHGGPTIQGLLAYYYRHDRTLPNRALPPPLLLSPPXXPLQXXXXXXXRFLKPTELSYEADRCAFNHMWDTPECRSYAIGDVHSVHFTQSCPKPWVC 366
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Predicted (protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7G703_PHATC) HSP 1 Score: 110 bits (274), Expect = 9.240e-26 Identity = 62/159 (38.99%), Postives = 86/159 (54.09%), Query Frame = 1
Query: 1 PTESNASLMYTTDPAMATKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDRCVYNHMSDS----------------------DECAERTPSAIKSVHFTQSCKKPWLC 411
PT NA +T D M + PVQGGFL++RPDL VY+E RAI+ +G++R G GW G +G F+G T QG+++YYYN++ PG A E++RCVYN M D+ ++C ER I + H+T C+KPW C
Sbjct: 195 PTSINA--FFTLDYNMVGPKKQYKPVQGGFLVMRPDLNVYEEFRAIVL---------EGDFRDGQGW-GGKVGPFHGSMTFQGIISYYYNVLHPGQAIELNRCVYNQMCDNPRTGKTVNDVVQGECRTNTETCEDCRERNLEDIVTTHYTL-CQKPWWC 340
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Putative (zinc-protease albF n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZ22_ECTSI) HSP 1 Score: 107 bits (267), Expect = 1.630e-25 Identity = 58/100 (58.00%), Postives = 69/100 (69.00%), Query Frame = 1
Query: 52 TKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDRCVYNHMSDSDECAER 351
T+ + + V L++ P DEL A HVV FRQG+W+VGPGWR SHIGYFYGGATIQGLLAYYYNIIAPGNATEVDR V + + + C +R
Sbjct: 178 TQYHRVMHVDADTLMLHP----MDELMARPRDYVHVVWFRQGDWKVGPGWRRSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDR-VGSRRAPALSCGKR 272
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4T1G8_9STRA) HSP 1 Score: 109 bits (273), Expect = 2.120e-25 Identity = 62/150 (41.33%), Postives = 85/150 (56.67%), Query Frame = 1
Query: 10 SNASLMYTTDPAMATKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDRCVYNHMSDS----------------DECAERTPSAIKSVHFTQSCKKPWLC 411
S+ + +T D M G K + VQGGFL+VRP L V++E R+II +GN+R G GW G + GYF G IQGL AYYY+ + PG A E++RC +N M+D ++C+ + S + SVHFT C+KPWLC
Sbjct: 259 SHINAYFTRDYNMVNPGKKHVGVQGGFLVVRPSLDVFEEYRSIIL---------EGNFRPGAGWGGQYGGYF-GAQQIQGLCAYYYDHLHPGEAAELNRCYFNAMADKPIQQSSGKCRTGEDVCEDCSTKDVSDLYSVHFTL-CQKPWLC 397
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Uncharacterized (protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C6W8_9STRA) HSP 1 Score: 103 bits (258), Expect = 6.840e-24 Identity = 60/130 (46.15%), Postives = 76/130 (58.46%), Query Frame = 1
Query: 22 LMYTTDPAMATKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYNIIAPGNATEVDRCVYNHMSDSDECAERTPSAIKSVHFTQSCKKPWLC 411
L+YT D MA+ +PVQGGFLL+RP L ++ L I+ R+G++ G GW S IG+F+GG TIQGLLAYYY + P A D CV N+M D+C R P S HFT C+KPW C
Sbjct: 171 LVYTEDAPMASNKHN-MPVQGGFLLLRPSLEIFQTLVEIV---------RKGDF-TGDGWNKSGIGWFWGGDTIQGLLAYYYRAVKPERAFIADPCVVNNML-IDDCRTRDPLETYSYHFTL-CQKPWKC 287
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCJ8_ECTSI) HSP 1 Score: 104 bits (259), Expect = 8.340e-24 Identity = 56/137 (40.88%), Postives = 78/137 (56.93%), Query Frame = 1
Query: 7 ESNASLMYTTDPAMATKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQGNWRVGPGWRGSHIGYFYGGATIQGLLAYYYNIIAPGNAT--EVDRCVYNHMSDSDECAERTPSAIKSVHFTQSCKKPWLC 411
++ SL+YT D M + + +PVQGGFL+VRPD V+ +L I+ ++ ++ GW GS IG F+GG +QG+L YYY AP VDR VYN+M D C S ++S HFT +C+KPW C
Sbjct: 186 DAEESLLYTADINMGSSYTPVMPVQGGFLVVRPDPEVFQDLVQIV---------KRTSFYPSKGWGGSMIGLFWGGVNVQGILPYYYERRAPAGVLYRSVDRSVYNNMVDRPSCQAVDISQVRSAHFT-NCQKPWEC 312 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7212.15393.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7212.15393.1 >prot_E_fasciculatus_S2_contig7212.15393.1 ID=prot_E_fasciculatus_S2_contig7212.15393.1|Name=mRNA_E_fasciculatus_S2_contig7212.15393.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=138bp MYTTDPAMATKGSKALPVQGGFLLVRPDLRVYDELRAIITYVQHVVCFRQback to top mRNA from alignment at E_fasciculatus_S2_contig7212:75..1309+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7212.15393.1 ID=mRNA_E_fasciculatus_S2_contig7212.15393.1|Name=mRNA_E_fasciculatus_S2_contig7212.15393.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1235bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7212:75..1309+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7212:75..1309+ >mRNA_E_fasciculatus_S2_contig7212.15393.1 ID=mRNA_E_fasciculatus_S2_contig7212.15393.1|Name=mRNA_E_fasciculatus_S2_contig7212.15393.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=414bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7212:75..1309+ (Ectocarpus fasciculatus EfasUO2)back to top |