mRNA_E_fasciculatus_S2_contig7191.15371.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: CNOT1_TTP_bind (domain-containing protein (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMN3_ECTSI) HSP 1 Score: 445 bits (1145), Expect = 3.720e-145 Identity = 251/268 (93.66%), Postives = 252/268 (94.03%), Query Frame = 2
Query: 2 EIPGEGMLPTCAMSLEAAAILLKALGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSMQRQGGGXXXXXXXXXXXXXXXXXX-------EPTGVAAALGSI 784
E PGEGMLPTCAMSLEAAAILLKALGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMA+SYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFH YPEKELRITGIL GSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAG MFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHP LVEEIERSMQRQGGG XXXXXXXXXXXXXXX EPTGVAAAL SI
Sbjct: 752 ETPGEGMLPTCAMSLEAAAILLKALGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMANSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILLGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPALVEEIERSMQRQGGGGPGXXXXXXXXXXXXXXXXXXXXXXEPTGVAAALESI 1019
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN6_9PHAE) HSP 1 Score: 439 bits (1129), Expect = 1.330e-136 Identity = 224/231 (96.97%), Postives = 225/231 (97.40%), Query Frame = 2
Query: 2 EIPGEGMLPTCAMSLEAAAILLKALGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSMQRQGGG 694
E PGEGMLPTCAMSLEAAAILLK LGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMA+SYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFH YPEKELRITGIL GSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAG MFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHP LVEEIERSMQRQGGG
Sbjct: 780 ETPGEGMLPTCAMSLEAAAILLKMLGATGLVSPAAEALAKKNPGIQASAKQLAEAGKKMHPTLNQLLNPPEEIESMANSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHNYPEKELRITGILLGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGKMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPALVEEIERSMQRQGGG 1010
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: Hypothetical (protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G852_9STRA) HSP 1 Score: 255 bits (651), Expect = 2.410e-78 Identity = 125/161 (77.64%), Postives = 140/161 (86.96%), Query Frame = 2
Query: 212 EEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSMQRQGGG 694
+EIE MA+SYFQ+IYT+EQSI EVI ML++FK+S + REQEIFACM+HNLFDEYRFFHKYPEKELRITGILFG+LIQHQLVSSITLGIALRYVLEALR+APG G MFRFGMFALEQFK RL EWPQYCSHIVQI HL H LV+EI+R+M+ GG
Sbjct: 253 DEIEDMANSYFQKIYTSEQSIAEVIDMLKKFKTSPNQREQEIFACMIHNLFDEYRFFHKYPEKELRITGILFGTLIQHQLVSSITLGIALRYVLEALRKAPGSGANGKMFRFGMFALEQFKARLYEWPQYCSHIVQIDHLCQQHAELVDEIQRAMKSSKGG 413
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: Hypothetical (protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RR73_9STRA) HSP 1 Score: 243 bits (619), Expect = 6.520e-77 Identity = 121/150 (80.67%), Postives = 133/150 (88.67%), Query Frame = 2
Query: 230 ADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSMQ 679
A+SYFQ+IYT+EQSI EVI ML+RFK+SS+ REQEIFACM+HNLFDEYRFFHKYPEKELRITGILFG+LIQHQLVSSITLGIALRYVLEALR+ G MFRFGMFALEQFK RL EWPQYCSHIVQI +L NHP LVEEI+R+MQ
Sbjct: 1 ANSYFQKIYTSEQSIAEVIEMLKRFKTSSNQREQEIFACMIHNLFDEYRFFHKYPEKELRITGILFGTLIQHQLVSSITLGIALRYVLEALRKPHWQS--GKMFRFGMFALEQFKARLSEWPQYCSHIVQIDYLNANHPDLVEEIKRAMQ 148
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: Ccr4-not (transcription n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TUR4_9STRA) HSP 1 Score: 257 bits (657), Expect = 2.360e-73 Identity = 123/156 (78.85%), Postives = 138/156 (88.46%), Query Frame = 2
Query: 218 IESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSMQRQ 685
IE MA++YFQ+IYT+EQSI +VI ML+RFKSS D +E EIFACM+ NLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSS+TLG+ALRYVLEALRR PGP AG +RFGMFALEQF+GRL EWPQYCSH++QIPHL NHP LV EIER+M RQ
Sbjct: 736 IEEMANAYFQKIYTSEQSIPDVIEMLKRFKSSKDAKELEIFACMIRNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSLTLGVALRYVLEALRRPPGPGNAGKWYRFGMFALEQFQGRLHEWPQYCSHLIQIPHLRQNHPDLVLEIERAMSRQ 891
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: CCR4-Not (complex component, Not1-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZHM2_9STRA) HSP 1 Score: 250 bits (638), Expect = 8.200e-71 Identity = 120/157 (76.43%), Postives = 132/157 (84.08%), Query Frame = 2
Query: 206 PPEEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSM 676
P +I MA++YFQRIYT+EQSI EV+ ML RF++S D REQ+IFACMVHNLFDEYRFFHKYPEKELRITG+LFG LIQ LVSSITLGIALRYVLEALR+ PGP G MFRFGMFALEQFKGRLGEWPQYCSHI I HL HP LV E+ER+M
Sbjct: 801 PASDIMEMANAYFQRIYTSEQSIPEVLEMLRRFQASDDKREQDIFACMVHNLFDEYRFFHKYPEKELRITGVLFGMLIQQGLVSSITLGIALRYVLEALRKPPGPGAEGKMFRFGMFALEQFKGRLGEWPQYCSHIASIQHLAAQHPELVREMERAM 957
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: Hypothetical (protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4W626_9STRA) HSP 1 Score: 244 bits (624), Expect = 5.820e-69 Identity = 127/188 (67.55%), Postives = 148/188 (78.72%), Query Frame = 2
Query: 143 SAKQLAEAGKKMHPTLNQLLNPP----EEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPA------GNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSM 676
S K+L +A +HP+LN ++ ++IE MA+SYFQ+IYT+EQSI EV+ ML+RFK S + RE +IFACM+HNLFDEYRFF KYPEKELRITGILFG LIQHQLVSSITLGIALRYVLEALR+ P P + G MFRFGMFALEQFKGRL EWPQYCSHIVQIPHL + LV+EIE +M
Sbjct: 525 SVKRLIDACVSVHPSLNNVIKQTSGNADDIEEMANSYFQKIYTSEQSIIEVVEMLKRFKISGNARENDIFACMIHNLFDEYRFFSKYPEKELRITGILFGMLIQHQLVSSITLGIALRYVLEALRKPPTPSVSTPNSNSGKMFRFGMFALEQFKGRLHEWPQYCSHIVQIPHLREKYSLLVDEIEGTM 712
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: Hypothetical (protein n=10 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RY41_9STRA) HSP 1 Score: 244 bits (624), Expect = 6.040e-69 Identity = 127/188 (67.55%), Postives = 148/188 (78.72%), Query Frame = 2
Query: 143 SAKQLAEAGKKMHPTLNQLLNPP----EEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPA------GNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSM 676
S K+L +A +HP+LN ++ ++IE MA+SYFQ+IYT+EQSI EV+ ML+RFK S + RE +IFACM+HNLFDEYRFF KYPEKELRITGILFG LIQHQLVSSITLGIALRYVLEALR+ P P + G MFRFGMFALEQFKGRL EWPQYCSHIVQIPHL + LV+EIE +M
Sbjct: 792 SVKRLIDACVSVHPSLNNVIKQTSGNADDIEEMANSYFQKIYTSEQSIIEVVEMLKRFKISGNARENDIFACMIHNLFDEYRFFSKYPEKELRITGILFGMLIQHQLVSSITLGIALRYVLEALRKPPTPSVSTPNSNSGKMFRFGMFALEQFKGRLHEWPQYCSHIVQIPHLREKYSLLVDEIEGTM 979
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: CCR4-NOT (transcription complex subunit 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JVQ8_FISSO) HSP 1 Score: 240 bits (612), Expect = 2.380e-67 Identity = 134/228 (58.77%), Postives = 163/228 (71.49%), Query Frame = 2
Query: 62 LLKALGATGLVSPAAEALAK--KNPGIQASAKQLAEAGKKMHPTLNQLL---NPP---------EEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPDPAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSM---QRQGGG 694
LL++L A+ L P +L + + + K L +A HP+L L NPP E++E MA +YFQ+IYT+EQSI +V+ ML+RFK+S +++E EIFACMVHNLF+EYRFF+KYPEKELRITGILFG+LIQ QLVSSITLGIALRYVLEALR+ P G MF+FGMFALEQFKGRL EWPQYCSHIVQIPHL + LV EIE M Q++G G
Sbjct: 607 LLESLEASVLAQPVVGSLDRVLATGTLGENVKSLMDACLTAHPSLRVALSGQNPPTPLAPLTSSEDVEDMATAYFQKIYTSEQSIGDVVEMLKRFKTSGNSKENEIFACMVHNLFNEYRFFNKYPEKELRITGILFGALIQEQLVSSITLGIALRYVLEALRKPPETTSTGKMFKFGMFALEQFKGRLHEWPQYCSHIVQIPHLKEKYAELVAEIESEMNKSQKRGSG 834
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Match: Hypothetical (protein n=2 Tax=Amphiprora paludosa TaxID=265537 RepID=A0A7S2YLA2_9STRA) HSP 1 Score: 236 bits (601), Expect = 6.900e-66 Identity = 116/161 (72.05%), Postives = 134/161 (83.23%), Query Frame = 2
Query: 212 EEIESMADSYFQRIYTAEQSIEEVIAMLERFKSSSDTREQEIFACMVHNLFDEYRFFHKYPEKELRITGILFGSLIQHQLVSSITLGIALRYVLEALRRAPGPD----PAGNMFRFGMFALEQFKGRLGEWPQYCSHIVQIPHLVGNHPTLVEEIERSMQR 682
E++E MA YFQ IYT++QSI E++ ML+RFK+S +++E EIFACMVHNLFDEYRFF KYPEKELRITGILFG+LIQ QLVSSITLGIALRYVLEALR+ P P +G MF+FGMFALEQFKGRL EWPQYCSHIVQIPHL N+ LV EIE+ M +
Sbjct: 433 EDVEEMATQYFQNIYTSKQSISEIVEMLKRFKTSGNSKENEIFACMVHNLFDEYRFFAKYPEKELRITGILFGALIQEQLVSSITLGIALRYVLEALRKPPTPQGSTTSSGKMFKFGMFALEQFKGRLHEWPQYCSHIVQIPHLKDNYGELVAEIEQEMAK 593 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7191.15371.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7191.15371.1 >prot_E_fasciculatus_S2_contig7191.15371.1 ID=prot_E_fasciculatus_S2_contig7191.15371.1|Name=mRNA_E_fasciculatus_S2_contig7191.15371.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=354bp GDPGRGHAADVRHVPRGRRYPPEGAGSHGAGVPRGRGPGEEEPGHPGVGEback to top mRNA from alignment at E_fasciculatus_S2_contig7191:4922..7176- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7191.15371.1 ID=mRNA_E_fasciculatus_S2_contig7191.15371.1|Name=mRNA_E_fasciculatus_S2_contig7191.15371.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2255bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7191:4922..7176- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7191:4922..7176- >mRNA_E_fasciculatus_S2_contig7191.15371.1 ID=mRNA_E_fasciculatus_S2_contig7191.15371.1|Name=mRNA_E_fasciculatus_S2_contig7191.15371.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1062bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7191:4922..7176- (Ectocarpus fasciculatus EfasUO2)back to top |