prot_E_fasciculatus_S2_contig7183.15359.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7183.15359.1
Unique Name	prot_E_fasciculatus_S2_contig7183.15359.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	226

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7183.15359.1 vs. uniprot
Match: A0A6H5KGI3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KGI3_9PHAE)

HSP 1 Score: 332 bits (851), Expect = 2.850e-113
Identity = 200/226 (88.50%), Postives = 203/226 (89.82%), Query Frame = 0

Query:    1 MRMGPSMPLLGALLGAGLTATSAFVSTTPIVSSSLSTRQQ-HQPCSSGXXXXXXXXXXXXXXXXXXXXXXXXVGGEGLAELGSMVSGAVGQVHASAMGSGLGTFLLLADDPPAPPNIYGEVAQGGFFIIFSGVFSAYIIATMIRTMPIDQLEKLTAELGGGNEIADLEAQRIETTKRFKELTKDMAQAADPTMGVKPDEALSEKLSQQTAKALQTDIASIEDEYGD 225
            MRMGPSMPLLGALLGAGLTATSAFVSTTP+VSSSLS RQ         XXXXXXXXXXXXXXX         VGGEGLAELGSMVSGAVGQ HASAMGSG+GTFLLLADDPPAPPNIYGEVAQGGFFIIFSGVFSAYIIATMIR MPIDQLEKLTAELGGGNEIADLEAQRIETTKRFKELTKDMAQAADPTMGVKPD ALSE+LSQQT KALQTDIASIEDEYGD
Sbjct:    1 MRMGPSMPLLGALLGAGLTATSAFVSTTPVVSSSLSARQLVXXXXXXXXXXXXXXXXXXXXXXRAMLFGGGGVGGEGLAELGSMVSGAVGQAHASAMGSGMGTFLLLADDPPAPPNIYGEVAQGGFFIIFSGVFSAYIIATMIRNMPIDQLEKLTAELGGGNEIADLEAQRIETTKRFKELTKDMAQAADPTMGVKPDGALSERLSQQTTKALQTDIASIEDEYGD 226

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BLAST of mRNA_E_fasciculatus_S2_contig7183.15359.1 vs. uniprot
Match: D7FMV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV7_ECTSI)

HSP 1 Score: 192 bits (489), Expect = 1.460e-59
Identity = 105/123 (85.37%), Postives = 107/123 (86.99%), Query Frame = 0

Query:  103 FLLLADDPPAPPNIYGEVAQGGFFIIFSGVFSAYIIATMIRTMPIDQLEKLTAELGGGNEIADLEAQRIETTKRFKELTKDMAQAADPTMGVKPDEALSEKLSQQTAKALQTDIASIEDEYGD 225
            FL LA      P     V   GFFIIFSGVFSAYIIATMIRTMPIDQLEKLTAELGGGNEIADLEAQRIETTKRFKELTKDMAQAADPTMGVKPD+ALSE+LSQQT KALQTDIASIEDEYGD
Sbjct:   13 FLRLAFSCLLHPFSTRFVFHRGFFIIFSGVFSAYIIATMIRTMPIDQLEKLTAELGGGNEIADLEAQRIETTKRFKELTKDMAQAADPTMGVKPDDALSERLSQQTTKALQTDIASIEDEYGD 135

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7183.15359.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7183.15359.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5KGI3_9PHAE	2.850e-113	88.50	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D7FMV7_ECTSI	1.460e-59	85.37	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 163..183
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 26..122
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 9..20
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..25
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 123..142
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 21..25
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 143..225
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..8
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..23 score: 0.787
None	No IPR available	TMHMM	TMhelix		coord: 9..31
None	No IPR available	TMHMM	TMhelix		coord: 120..142

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7183	contig	E_fasciculatus_S2_contig7183:1500..5228 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7183.15359.1	mRNA_E_fasciculatus_S2_contig7183.15359.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7183 1329..6150 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7183.15359.1 ID=prot_E_fasciculatus_S2_contig7183.15359.1|Name=mRNA_E_fasciculatus_S2_contig7183.15359.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=226bp
MRMGPSMPLLGALLGAGLTATSAFVSTTPIVSSSLSTRQQHQPCSSGRTT
SATPNSRRRTATTAMLFGGGGVGGEGLAELGSMVSGAVGQVHASAMGSGL
GTFLLLADDPPAPPNIYGEVAQGGFFIIFSGVFSAYIIATMIRTMPIDQL
EKLTAELGGGNEIADLEAQRIETTKRFKELTKDMAQAADPTMGVKPDEAL
SEKLSQQTAKALQTDIASIEDEYGD*