mRNA_E_fasciculatus_S2_contig718.15356.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LE38_ECTSI) HSP 1 Score: 401 bits (1030), Expect = 3.200e-141 Identity = 193/201 (96.02%), Postives = 196/201 (97.51%), Query Frame = 1
Query: 1 MRPARKRLGVRDEVAAAPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPT 603
MRPARK L VRDEVAA PSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARG QRILPSLPNIMRALR+AISCKNPGVI+FACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQD+GEAVSCTVETLERNGGKHAFAHIKHCIPT
Sbjct: 1 MRPARKGLSVRDEVAAVPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGYPQRILPSLPNIMRALRVAISCKNPGVIIFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDVGEAVSCTVETLERNGGKHAFAHIKHCIPT 201
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Hypothetical (protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y192_9STRA) HSP 1 Score: 198 bits (504), Expect = 8.060e-59 Identity = 93/184 (50.54%), Postives = 129/184 (70.11%), Query Frame = 1
Query: 61 FPDRYLRGEVPCS-KHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
FP RY RGE+PCS +H S+ AL+W+CPL+ LDYE+YLPMFF+GIRC E+P +A QGV +LL A++G +RILP+LP +++ LRMA+ K P +I+ A ++ L N +GEA+V YY+ L VFNLF ++ GD +DYGQR DI + T+E LER GG+ +FA+IK+ +PT E
Sbjct: 210 FPIRYKRGELPCSIEHKSSGYALLWICPLQTLDYEHYLPMFFEGIRCTEDPYKYMASQGVMELLDASKGYPERILPTLPEVVKYLRMALMSKLPDIIITALRCIQSLVLCNVGIGEAMVPYYRQLLSVFNLFRGKRRNLGDGMDYGQRKGDDINSVIDETLEVLERTGGEDSFANIKYMVPTYE 393
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Hypothetical (protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H4I7_HETAK) HSP 1 Score: 194 bits (493), Expect = 7.440e-58 Identity = 95/184 (51.63%), Postives = 125/184 (67.93%), Query Frame = 1
Query: 61 FPDRYLRGEVPCS-KHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
FP RY RGE+PCS +H +A AL WVCPL+ LDY++YLP+FFDGIR E+P LARQGV +LL AARG +R+LP LP ++ LR A+ ++P V+L A + +L N VGEALV YY+ L V NLF+ ++ GD +DYGQR +D+ V +E LER GG AFA+IK+ +PT E
Sbjct: 149 FPVRYNRGELPCSVEHTAAGYALTWVCPLQTLDYDHYLPIFFDGIRATEQPYKFLARQGVRELLEAARGYPERVLPCLPEVVAGLRRALDTRDPPVLLAALGCVEELVGCNAGVGEALVPYYRQLLSVMNLFLAKRENLGDAMDYGQRRGEDLAARVGEVLEALERTGGPDAFANIKYSVPTYE 332
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Hypothetical (protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FEA0_9STRA) HSP 1 Score: 188 bits (478), Expect = 1.420e-56 Identity = 92/202 (45.54%), Postives = 130/202 (64.36%), Query Frame = 1
Query: 7 PARKRLGVRDEVAAAPSAFPDRYLRGEVPCS-KHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
P + + G + + FP RY RGE+PC+ +H S+A+ L WVCPL LDYE+YLP+F DGIRC E P LARQG +LL A+G R++P +P +++ LR+A++ +P +IL A + L++L N VGEALV YY+ L V NLF+ + GD IDY Q D+ A+ T+E LE+NGG +AF +IK+ +PT E
Sbjct: 53 PPKPKAGAYRKKDVPTTLFPIRYKRGELPCAIEHRSSANGLSWVCPLHNLDYEHYLPIFVDGIRCTENPYCFLARQGCHELLEGAQGYPDRVIPCIPELIKPLRLALTTNHPDIILAALTFLKELVLCNYGVGEALVPYYRQLLSVLNLFLTKRTNIGDAIDYSQFKGNDMSTAIMETLEVLEKNGGSNAFINIKYMVPTYE 254
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Uncharacterized (protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y431_AURAN) HSP 1 Score: 181 bits (460), Expect = 3.220e-54 Identity = 88/196 (44.90%), Postives = 127/196 (64.80%), Query Frame = 1
Query: 25 GVRDEVAAAPSAFPDRYLRGEVPCS-KHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
GV + + FP RY RGE+PCS +H + + L W+CPL QLDYE+YLP+F DGIRC E P +ARQG +L+ A+G +LP LP++++ +R+A++ K+P ++ A AL+++ N VGEALV +Y+ L V NLF ++ GD I YGQR D+G AV T+E LE+ GG +AF +IK+ +P E
Sbjct: 30 GVFRKTKVEATMFPIRYRRGELPCSIEHRGSGNNLSWICPLLQLDYEHYLPIFLDGIRCTESPYQFVARQGFDELIEEAKGFPDCVLPCLPDLIKPIRLALNTKDPDIVHAALRALQKIVLSNYGVGEALVPFYRQLLSVMNLFFTKRQNLGDAIFYGQRKGTDLGTAVLETLELLEKTGGPNAFVNIKYMVPAYE 225
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Uncharacterized (protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SS01_9ARCH) HSP 1 Score: 174 bits (442), Expect = 2.690e-50 Identity = 86/194 (44.33%), Postives = 121/194 (62.37%), Query Frame = 1
Query: 31 RDEVAAAPSAFPDRYLRGEVPCS-KHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
R E+ PS P+RY RGE+PC+ +H ++ L W CPLE LDYEYYLP+FFDG++C + +ARQG+ D+L A+RG +RI+P L + R LR A++ + ++L +L QL N EVG L+ Y + FL FM+ K TGDKIDYGQR + D+GE + +E +E +GG A IK +P C+
Sbjct: 130 RPEIKIPPSMLPNRYKRGELPCTIEHGTSGLYLSWACPLENLDYEYYLPLFFDGLQCKDHITSFIARQGIEDMLYASRGHPERIIPVLHLLARPLRNALAKFDEEILLPVLKSLEQLILSNAEVGAELLKYGRQFLVPIAYFMDKNKHTGDKIDYGQRRNDDVGEQIRRVLELMEEHGGPRALQLIKFSVPLCK 323
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Parkin (co-regulated protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJW5_9STRA) HSP 1 Score: 164 bits (415), Expect = 4.030e-46 Identity = 87/189 (46.03%), Postives = 113/189 (59.79%), Query Frame = 1
Query: 46 AAPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMN---CTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPT 603
A PS FP RY G++PCS S LVWVCPL+QLDY YYLP+F DGIRC +PC LARQG+ DLLSAA G+ +R++P L +I ALR A + ++ + C L L EVG ALV +YK FL + N +N + G +I G D+ + T++ LER+GG FA IKH +PT
Sbjct: 151 ATPSRFPGRYAMGDIPCSID-SGDGVLVWVCPLQQLDYHYYLPLFLDGIRCTADPCKMLARQGLLDLLSAATGTPERVVPLLKDIAMALRNACLTDSQELVAYTCKVLETLVGIGPEVGLALVPHYKAFLSLLNKHINDAPLKNAQGKEI--GHNRKLDLSVLIEETLQMLERSGGSGVFAVIKHAVPT 336
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Hypothetical (protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S4ED43_9STRA) HSP 1 Score: 164 bits (416), Expect = 5.560e-46 Identity = 77/184 (41.85%), Postives = 119/184 (64.67%), Query Frame = 1
Query: 61 FPDRYLRGEVPCS-KHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
FP RY RGE+PC+ +H + + L W CPL QLDYE+YLP+F DGIRC + +ARQG +++ A+G +LP +P +++ +R+A++ +P +++ +AL+++ N VGEA+V +Y+ L NLF ++ GD+I YGQR D+G AV T+E LE+ GG +AF +IK +P E
Sbjct: 182 FPTRYERGELPCAIEHGACHNTLSWACPLLQLDYEHYLPIFLDGIRCTDARYKFVARQGFDEMIEEAKGFPDCVLPVVPALIKPIRLALATHDPDIVVAGLNALQKVVLSNYGVGEAMVPFYRQLLQPMNLFYTKRQNIGDQIFYGQRKGTDLGTAVLETLELLEKTGGPNAFVNIKSYVPVYE 365
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Putative (mitochondrial PACRGB n=2 Tax=Leptomonas pyrrhocoris TaxID=157538 RepID=A0A0M9GB55_9TRYP) HSP 1 Score: 162 bits (409), Expect = 1.800e-45 Identity = 82/186 (44.09%), Postives = 117/186 (62.90%), Query Frame = 1
Query: 52 PSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
P+ F Y RG++P S +A L+W + +LDY +YLP+FFDG+R LEEP +A QG DLL +ILP++P I+ L+ A++ ++P V+ +++L VGEALV YY+ L VFNLF N TK+ GD++DYGQRNSQD+ ++ T+ LER GG A+ +IK+ IPT E
Sbjct: 133 PTEFRHHYERGDLPLSVQHAAKRTLMWKVDVSKLDYHHYLPIFFDGLRELEEPFSFVAHQGSLDLLE---NGGAKILPTVPQIIMPLKTALNTRHPDVLRKVFHVIQKLVVSGDHVGEALVPYYRQLLPVFNLFKNRTKNMGDRMDYGQRNSQDLSSLINDTLYLLERYGGPDAYINIKYMIPTYE 315
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Match: Uncharacterized (protein n=18 Tax=Leishmania TaxID=5658 RepID=E9AFU6_LEIMA) HSP 1 Score: 155 bits (393), Expect = 3.980e-43 Identity = 79/197 (40.10%), Postives = 118/197 (59.90%), Query Frame = 1
Query: 19 RLGVRDEVAAAPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQLDYEYYLPMFFDGIRCLEEPCMTLARQGVSDLLSAARGSSQRILPSLPNIMRALRMAISCKNPGVILFACSALRQLATGNKEVGEALVGYYKMFLHVFNLFMNCTKSTGDKIDYGQRNSQDIGEAVSCTVETLERNGGKHAFAHIKHCIPTCE 609
+ G + P+ F Y R ++P S A +L W + +LDY +YLP+FFDG+R LEEP +A QG DLL G +ILP++P ++ L+ A++ ++P V+ +++L +GEALV YY+ L VFN+F N TKS GD++DYGQRNS D+ ++ T+ LER GG A+ +IK+ +PT E
Sbjct: 118 KAGAYSKQRMPPTDFRHHYERSDLPLSIQHGAKRSLHWKVDVSKLDYHHYLPIFFDGLRELEEPFSFVAYQGSMDLLE---GGGAKILPTVPQLIVPLKTALNSRHPDVLRKVFHVIQKLVVSGDHIGEALVPYYRQLLPVFNMFKNRTKSMGDRMDYGQRNSHDLSSLINDTLYLLERYGGPDAYINIKYMVPTYE 311 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig718.15356.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig718.15356.1 >prot_E_fasciculatus_S2_contig718.15356.1 ID=prot_E_fasciculatus_S2_contig718.15356.1|Name=mRNA_E_fasciculatus_S2_contig718.15356.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=204bp MRPARKRLGVRDEVAAAPSAFPDRYLRGEVPCSKHCSAASALVWVCPLEQback to top mRNA from alignment at E_fasciculatus_S2_contig718:15549..18071+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig718.15356.1 ID=mRNA_E_fasciculatus_S2_contig718.15356.1|Name=mRNA_E_fasciculatus_S2_contig718.15356.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=2523bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig718:15549..18071+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig718:15549..18071+ >mRNA_E_fasciculatus_S2_contig718.15356.1 ID=mRNA_E_fasciculatus_S2_contig718.15356.1|Name=mRNA_E_fasciculatus_S2_contig718.15356.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=612bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig718:15549..18071+ (Ectocarpus fasciculatus EfasUO2)back to top |