prot_E_fasciculatus_S2_contig7167.15343.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7167.15343.1
Unique Name	prot_E_fasciculatus_S2_contig7167.15343.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	538

Homology

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BLAST of mRNA_E_fasciculatus_S2_contig7167.15343.1 vs. uniprot
Match: D7FZR7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FZR7_ECTSI)

HSP 1 Score: 601 bits (1550), Expect = 4.040e-210
Identity = 348/367 (94.82%), Postives = 358/367 (97.55%), Query Frame = 0

Query:  172 MDFTFARFALNMAMASSRTEPDVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVLVQACISIAQLSRYAPNRAIIAAKGGIAAMVRLLEGFRREERVTEQVIGQALTALVNVTYRSDANRGLVEECGATHPTITIMDALDNEVVLVQACLALANMAYGNQFAALRLLEAGADKAACDLIRDSDKTRHSDVMKAAFICIANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAASCVAILMQHPTNALAMKRGGGVRE 538
            MDFTFARFALNMA+ASSRTEP+VMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGG+PPLVLLCFTSQSPAVLVQACISIAQLSRY PNRAIIAAKGG+AAMVRLLEGFRRE+ VTEQVIGQALTALVNVTYRSDANRGLVEECGAT PTITIMDALDNEVVLVQACLALANMAY NQFAALRLLEAGADKAACDLIRDSDKTRHSDV++AAFIC+ANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    QAASCVAILMQHPTNALAMKR GG++E
Sbjct:    1 MDFTFARFALNMAIASSRTEPEVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGIPPLVLLCFTSQSPAVLVQACISIAQLSRYPPNRAIIAAKGGVAAMVRLLEGFRREDHVTEQVIGQALTALVNVTYRSDANRGLVEECGATLPTITIMDALDNEVVLVQACLALANMAYLNQFAALRLLEAGADKAACDLIRDSDKTRHSDVIEAAFICLANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKNQANKTRCASLDAVSILLELAAAWGVAEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTAAGQAASCVAILMQHPTNALAMKRAGGLKE 367

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BLAST of mRNA_E_fasciculatus_S2_contig7167.15343.1 vs. uniprot
Match: F0YNI0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YNI0_AURAN)

HSP 1 Score: 87.4 bits (215), Expect = 3.570e-15
Identity = 90/306 (29.41%), Postives = 127/306 (41.50%), Query Frame = 0

Query:  136 EAKQTADSEREEKAILCQWLNG------------RVIFCSSSEPRLSSMDFTFARFALNMA-----MASSRTEPDVMLKAGAPAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCFTSQSPAVLVQACISIAQLSRYAPNRAIIAAKGGIAAMVRLLEGFR---------------------------REERVTEQVIGQALTALVNVTYRSDANRGLVEECGATHPTITIMDALDNEVVLVQACLALANMAYGNQFAALRLLEAGADKAACDLIRDSDKTRHSDVMKAA 397
            EA   A+ ER EK++L QWL G             + F       L ++DF F R+ALN         +S T   +  +  AP   +  L++   LV GP+++AL+ +A  +   RA                +Q  A     C +I  L+  A NR  IAA  GI+ +V+LL   R                            + RVTE V   AL A  N+T  S+ANR LV E G   P +           +  A  A+AN+AYG+ FA  + L A AD A C  I   D      +++AA
Sbjct:   44 EAAFIAEKERSEKSLLAQWLQGFAHSLYKGPSTSGLEFALEVGLGLDAIDFAFCRYALNFREFRKYWLASLTVLILRWQLAAP---INALSDAAALVCGPSLMALTHLAQKDGPARAA------------IAEAQDCA-----CHAIGALALLAENRIRIAAANGISILVKLLSMARPPPILAADAANDLVCASSVYRVPKDANEDLRVTEAVQEAALVAFTNLTNSSEANRQLVAELGGVTPMVVCALFARGGAPVRNAAQAIANVAYGSNFAVAKCLMARADVAMCSAISAVDLLCEDSLLEAA 329

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7167.15343.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7167.15343.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D7FZR7_ECTSI	4.040e-210	94.82	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]
F0YNI0_AURAN	3.570e-15	29.41	Uncharacterized protein n=1 Tax=Aureococcus anopha...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 105..125
None	No IPR available	PANTHER	PTHR47249	FAMILY NOT NAMED	coord: 138..471
IPR000225	Armadillo	SMART	SM00185	arm_5	coord: 229..270 e-value: 61.0 score: 7.2 coord: 319..360 e-value: 4.2 score: 16.2 coord: 271..317 e-value: 5.5 score: 15.2 coord: 188..228 e-value: 23.0 score: 10.4
IPR000225	Armadillo	PROSITE	PS50176	ARM_REPEAT	coord: 282..330 score: 9.712
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 176..344 e-value: 7.2E-19 score: 69.7
IPR011989	Armadillo-like helical	GENE3D	1.25.10.10		coord: 345..537 e-value: 3.8E-11 score: 44.7
IPR016024	Armadillo-type fold	SUPERFAMILY	48371	ARM repeat	coord: 191..469

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7167	contig	E_fasciculatus_S2_contig7167:1224..7817 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7167.15343.1	mRNA_E_fasciculatus_S2_contig7167.15343.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7167 1224..7817 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7167.15343.1 ID=prot_E_fasciculatus_S2_contig7167.15343.1|Name=mRNA_E_fasciculatus_S2_contig7167.15343.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=538bp
MSASSAIRNESKASQGPAWGLQEQLSRLRKDGGSKNVAPTVQQDPSGRSK
IRVSVTGPALAHKIEQHFAGDKASNREILGFCAQEVDKALSVLVQRVKKK
VLVTIDKIDTQLLRLEGNMRQLCDEVEKKGNRMMREAKQTADSEREEKAI
LCQWLNGRVIFCSSSEPRLSSMDFTFARFALNMAMASSRTEPDVMLKAGA
PAFLVGMLTNPNELVTGPAVLALSQMAHHEACQRALGLAGGVPPLVLLCF
TSQSPAVLVQACISIAQLSRYAPNRAIIAAKGGIAAMVRLLEGFRREERV
TEQVIGQALTALVNVTYRSDANRGLVEECGATHPTITIMDALDNEVVLVQ
ACLALANMAYGNQFAALRLLEAGADKAACDLIRDSDKTRHSDVMKAAFIC
IANLANNPLNQAHVGAGDSVELALSVCKHCQSARVVRSAARALCSLTLKN
QANKTRCASLDAVSILLELAAAWGVAEDDGGSSKQTGTISSSRSAAAAAA
ATAEEEGAAAGQAASCVAILMQHPTNALAMKRGGGVRE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR016024	ARM-type_fold
IPR011989	ARM-like
IPR000225	Armadillo