mRNA_E_fasciculatus_S2_contig714.15318.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW87_9PHAE) HSP 1 Score: 393 bits (1009), Expect = 2.220e-133 Identity = 209/237 (88.19%), Postives = 215/237 (90.72%), Query Frame = 1
Query: 16 TEHFPSKMTFLRPLCLLSLALRTASGTQSCSRLRRRTNPAPTAFASSPFLITRKPALHIAAWRWRPQPAAHRWRTVQRRGTATAMVTTAEDE----EPREGPRLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIASGSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
TEH PSKMTFLRPLCLLSLALR ASG QSCSRLRRRTNPA AFASSPFLITR ALH AWRWRP+PAAHR T QRRGTATAM TTAEDE EP + P LGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLG+RTSDIN+E+ASGSDVVVVAVKPDVVP VLREIAPHLR+DALVVSIAAGIPLAVLEQL PGKRVVRVMPNTPCLVSEGATGFSMGSLAT
Sbjct: 3 TEHSPSKMTFLRPLCLLSLALRNASGAQSCSRLRRRTNPALAAFASSPFLITRAAALHNGAWRWRPEPAAHR-HTAQRRGTATAMATTAEDEVEAPEPGDAPTLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGIRTSDINVEVASGSDVVVVAVKPDVVPAVLREIAPHLRKDALVVSIAAGIPLAVLEQLAPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 238
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWF9_ECTSI) HSP 1 Score: 279 bits (713), Expect = 4.080e-89 Identity = 149/164 (90.85%), Postives = 152/164 (92.68%), Query Frame = 1
Query: 235 RTVQRRGTATAMVTTAEDE----EPREGPRLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIASGSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
RT QRRGTATAM TT EDE EP +GPRLGFVGAGMMATAMVNGIVASKVTEP NVFVSAPHRSSLDR AKLGVRTSDINLE+ASGSDVVVVAVKPDVVP VLREIAPHLR+DALVVSIAAGIPLAVLEQL PGKRVVRVMPNTPCLVSEGATGFSMGSLAT
Sbjct: 36 RTAQRRGTATAMATTVEDEVEAPEPGDGPRLGFVGAGMMATAMVNGIVASKVTEPDNVFVSAPHRSSLDRFAKLGVRTSDINLEVASGSDVVVVAVKPDVVPAVLREIAPHLRKDALVVSIAAGIPLAVLEQLAPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 199
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G6J4_ECTSI) HSP 1 Score: 183 bits (464), Expect = 1.990e-52 Identity = 90/139 (64.75%), Postives = 113/139 (81.29%), Query Frame = 1
Query: 295 PREGPRLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIASGSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVPGKRVVRVMPNTPCLVSEGATGFSMGSLA 711
P P+LGF+GAGMM++AM+NGI+A+KVTEPGN+ S ++ SLDRL+ GVRTS N E+ +G+DV+V+AVKPDV+P VL EI L +D+LVVSIAAG+PL+ LE LVPGKRV+RVMPNTPCLVSE A FS+GS A
Sbjct: 9 PASNPKLGFIGAGMMSSAMINGIIAAKVTEPGNIIASDVYQPSLDRLSASGVRTSTTNKEVVTGADVIVLAVKPDVIPAVLTEIEQFLTDDSLVVSIAAGVPLSALENLVPGKRVIRVMPNTPCLVSESAAAFSLGSHA 147
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=1 Tax=Capitella teleta TaxID=283909 RepID=R7VCY3_CAPTE) HSP 1 Score: 129 bits (323), Expect = 1.290e-31 Identity = 70/136 (51.47%), Postives = 96/136 (70.59%), Query Frame = 1
Query: 310 RLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIASGSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQ-LVPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
R+GF+GAG MA A+ +GI++S + +P NV S P ++L +KLG RT+ N E+ DVVV++VKP+ VPGVL+EI P + ++ LV SIAAGI LA+LE+ L P RV+RVMPNTP +V GAT S G+ +T
Sbjct: 8 RVGFLGAGQMAQALCSGIISSGLVKPNNVIASDPKPATLQITSKLGARTTTNNAEVMQNCDVVVISVKPNAVPGVLKEILPLVTKNHLVTSIAAGISLALLEESLPPNTRVIRVMPNTPAMVQAGATVISPGTHST 143
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Hypothetical (protein n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4J3C9_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.280e-31 Identity = 67/134 (50.00%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 316 GFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIAS-GSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
GF+GAGMMA+A++ G+V++KV +P N+ S P+ S + ++ G ++ N E+ DVV++AVKP+VV +A + DALVVSI AG+ L LE L+PG+RVVRVMPNTPCLV E A+GF++G LAT
Sbjct: 5 GFIGAGMMASALMQGLVSNKVVDPSNISCSDPYEPSRKKASEQGFFATESNKEVCERAKDVVILAVKPNVVEAACSSVAA-VESDALVVSILAGVTLKTLEDLLPGRRVVRVMPNTPCLVGEAASGFALGKLAT 137
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4MWR8_9STRA) HSP 1 Score: 127 bits (320), Expect = 3.600e-31 Identity = 67/134 (50.00%), Postives = 94/134 (70.15%), Query Frame = 1
Query: 316 GFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIAS-GSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
GF+GAGMMA+A++ G+V++KV +P N+ S P+ S + ++ G ++ N E+ DVV++AVKP+VV +A + DALVVSI AG+ L LE L+PG+RVVRVMPNTPCLV E A+GF++G LAT
Sbjct: 5 GFIGAGMMASALMQGLVSNKVVDPSNISCSDPYEPSRKKASEQGFFATESNKEVCERAKDVVILAVKPNVVEAACSSVAA-VESDALVVSILAGVTLKTLEDLLPGRRVVRVMPNTPCLVGEAASGFALGKLAT 137
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Hypothetical (protein n=1 Tax=Lotharella globosa TaxID=91324 RepID=A0A7S3YJZ1_9EUKA) HSP 1 Score: 122 bits (307), Expect = 4.380e-30 Identity = 67/138 (48.55%), Postives = 93/138 (67.39%), Query Frame = 1
Query: 307 PRLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKL-GVRTSDINLEIASGSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVP-GKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
PR+GF+GAG MATAM GIV SK+ ++ S + + AKL G T++ N +A GS+ +++AVKP++VP VL E+ L LVVSIAAG+ LA +E+L+P G R+ RVMPNTPCLV E A+ +++G AT
Sbjct: 2 PRVGFIGAGQMATAMARGIVKSKLYPAADIIASDRSKEQRESFAKLVGCSTTEDNKAVAKGSETLILAVKPNIVPYVLAEVKGCLTSSTLVVSIAAGVSLATMEELLPTGTRLARVMPNTPCLVGETASAYALGKNAT 139
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=2 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A6U3Z405_9STRA) HSP 1 Score: 125 bits (313), Expect = 5.150e-30 Identity = 63/137 (45.99%), Postives = 98/137 (71.53%), Query Frame = 1
Query: 313 LGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIAS-GSDVVVVAVKPDVVPGVLREIAP-HLREDALVVSIAAGIPLAVLEQLVP-GKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
+GF+GAGMMA+A++NG+++SK+ P ++ S ++ SLD+ A G+ T+ N E+ + DV+++AVKP ++P V +IA DA+++SIAAG+ LA LE +P G RV+RVMPNTPCL+ A+G+S+GS A+
Sbjct: 8 VGFIGAGMMASALMNGLISSKIASPSSIICSDVYQPSLDKAAANGISTTSSNAEVCNKAKDVIILAVKPHIIPSVCADIAKVEGGSDAVIISIAAGVTLATLEGALPKGARVIRVMPNTPCLIGAAASGYSLGSTAS 144
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2LKD9_9STRA) HSP 1 Score: 124 bits (312), Expect = 5.500e-30 Identity = 67/135 (49.63%), Postives = 90/135 (66.67%), Query Frame = 1
Query: 313 LGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIASGSD-VVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVPGKRVVRVMPNTPCLVSEGATGFSMGSLAT 714
+GF+G GMMA+A+++GI+A V P V+ S S D A G SD N ++ + SD + +AVKP+ V G ++IA A++VSIAAG+ L LE+ +PG+RVVRVMPNTPCLV E A GF+MGSLAT
Sbjct: 5 IGFIGTGMMASALIDGIIAKGVRTPSQVWCSDIWGPSRDAAAAKGYNASDKNADVCANSDDAIFIAVKPNCVMGACKDIADGADTGAVIVSIAAGVTLETLEKALPGRRVVRVMPNTPCLVGESACGFAMGSLAT 139
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Match: Pyrroline-5-carboxylate (reductase n=3 Tax=Percomorphaceae TaxID=1489872 RepID=A0A3Q0RP02_AMPCI) HSP 1 Score: 122 bits (306), Expect = 1.840e-29 Identity = 68/135 (50.37%), Postives = 92/135 (68.15%), Query Frame = 1
Query: 310 RLGFVGAGMMATAMVNGIVASKVTEPGNVFVSAPHRSSLDRLAKLGVRTSDINLEIASGSDVVVVAVKPDVVPGVLREIAPHLREDALVVSIAAGIPLAVLEQLVPGKRVV-RVMPNTPCLVSEGATGFSMGSLA 711
++GF+GAG MA + GI++ V P NV VSAP +L R +LG+ + N+E+ GSDVV VA+KP VVP VL EI+ H+ + ++VS+AAG+ LA LE+L+P VV R+MPN PCLV EGA F+ GS A
Sbjct: 6 KIGFIGAGNMAFGIAKGILSGNVL-PANVKVSAPSSRNLGRFQELGIAVTHSNVEVVCGSDVVFVAIKPHVVPLVLNEISQHVTDRHMIVSVAAGVTLATLEELLPENSVVIRLMPNLPCLVQEGALLFARGSHA 139 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig714.15318.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig714.15318.1 >prot_E_fasciculatus_S2_contig714.15318.1 ID=prot_E_fasciculatus_S2_contig714.15318.1|Name=mRNA_E_fasciculatus_S2_contig714.15318.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=254bp MTFLRPLCLLSLALRTASGTQSCSRLRRRTNPAPTAFASSPFLITRKPALback to top mRNA from alignment at E_fasciculatus_S2_contig714:22456..27837+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig714.15318.1 ID=mRNA_E_fasciculatus_S2_contig714.15318.1|Name=mRNA_E_fasciculatus_S2_contig714.15318.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=5382bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig714:22456..27837+ (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig714:22456..27837+ >mRNA_E_fasciculatus_S2_contig714.15318.1 ID=mRNA_E_fasciculatus_S2_contig714.15318.1|Name=mRNA_E_fasciculatus_S2_contig714.15318.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=762bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig714:22456..27837+ (Ectocarpus fasciculatus EfasUO2)back to top |