prot_E_fasciculatus_S2_contig7095.15266.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7095.15266.1
Unique Nameprot_E_fasciculatus_S2_contig7095.15266.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length277
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: D8LND0_ECTSI (Replication factor C subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LND0_ECTSI)

HSP 1 Score: 369 bits (946), Expect = 1.530e-117
Identity = 188/197 (95.43%), Postives = 194/197 (98.48%), Query Frame = 0
Query:    1 MQVDARVRSDVTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQALAVALQAPKKAKK 197
            MQVDA+VR++VTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGS+GGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNA VSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACV LLEEYGLSRDDLFEVLPEFVLSGKGMKRPP D+FGSLDSKTRSAVTRCYN+QAHKSQALAVALQAPKKAKK
Sbjct:  745 MQVDAKVRTEVTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSVGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNASVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVDLLEEYGLSRDDLFEVLPEFVLSGKGMKRPPPDLFGSLDSKTRSAVTRCYNSQAHKSQALAVALQAPKKAKK 941          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: A0A7S2WPH2_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WPH2_9STRA)

HSP 1 Score: 177 bits (448), Expect = 4.670e-49
Identity = 96/178 (53.93%), Postives = 122/178 (68.54%), Query Frame = 0
Query:   14 AASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQALAVALQA 191
            AAS A+SD D+I   +R D Q+W LLP QA + VRVG+   G LGFP+FP+WLG  S  NKRRRLLG+L+ HL++ VSGG EAVRL+Y   L+R L  PL ++GA G    +A+L+EYG+SR+DLFE LPE  L G G      +    +DSKT+SA TR YN   H+SQA+A A QA
Sbjct:  198 AASEALSDCDLIDSMLRRD-QNWSLLPFQAVMTVRVGTHTRGGLGFPKFPEWLGKNSTGNKRRRLLGDLAMHLSSAVSGGQEAVRLNYAPVLRRRLVSPLLQKGAEGVQETIAMLDEYGMSREDLFETLPELQLPGYG------EDLDKIDSKTKSAFTRKYNQGVHRSQAIAGAAQA 368          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: F0XZ23_AURAN (AAA domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XZ23_AURAN)

HSP 1 Score: 134 bits (338), Expect = 4.640e-32
Identity = 77/172 (44.77%), Postives = 105/172 (61.05%), Query Frame = 0
Query:   14 AASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQAL 185
            AA+A +SD D+I  ++  D Q W LL  +A+L VR G +  GS   P+F  W G  S   K +R  GEL+ HL + +SG  +AVR  Y+  L + +T+PL + GAAG    +A L+EYGLS+DDLFE LP+  L G   K P LD   +LD+K ++  T+ YNA  H SQAL
Sbjct:  450 AAAACLSDVDLIDRRVHAD-QEWGLLTTEASLTVRAGVLVDGSCMAPQFSAWFGKNSTTKKSKRQCGELALHLGSRISGTRDAVRRDYLPMLAKYVTRPLVDGGAAGVAETIARLDEYGLSKDDLFETLPDLQLGGA--KVPGLD---ALDTKVKTHFTKTYNAGTHGSQAL 615          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: B8C9T1_THAPS (Replication factor C subunit 1 n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8C9T1_THAPS)

HSP 1 Score: 127 bits (319), Expect = 2.250e-29
Identity = 72/176 (40.91%), Postives = 101/176 (57.39%), Query Frame = 0
Query:   15 ASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGGGSLG-----FPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQAL 185
            A+ A+SD  I+   +RG  Q+W LLP  + L  +VG   GG  G     +PEF  WLG  S  NK+ RLLGEL  H+N  VS  +  +R++Y+  ++    + L  +        +AL++EYGL RDD+FE L EF+L+    K      FG +DSK ++A TR YN  AHK+QAL
Sbjct:  973 ATLAMSDFGIVEENLRGGDQNWALLPLCSVLAAKVGFHAGGPTGGFLPGYPEFAGWLGKNSTRNKKIRLLGELRHHMNFKVSADSPELRMNYLPIMREQFQELLFCKDGPRVTEAIALMDEYGLDRDDVFENLDEFILTSADSKEKK---FGDMDSKAKAAFTRAYNQLAHKAQAL 1145          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: A0A812KXV0_9DINO (Replication factor C subunit 1 n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812KXV0_9DINO)

HSP 1 Score: 127 bits (318), Expect = 2.800e-29
Identity = 76/179 (42.46%), Postives = 104/179 (58.10%), Query Frame = 0
Query:   15 ASAAVSDADIISG--KMRGDVQHWELLPAQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFE---VLPEFVLSGKG---MKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQAL 185
            A+ A++ +D++S   +MRG    W LL + AA+NV+      GS+ FP FP+W G  S   KRRRLLGELS HLN  VSGG++++R+ Y+  LK     P+ E+GA G P  +A+L+ YGLS+ DL E     P F L        K    D F  +    +S +TR YNA  H+SQAL
Sbjct:  626 AADAIALSDVMSNCVRMRGQ---WSLLTSVAAMNVKAAYHASGSVAFPGFPEWFGKNSTMGKRRRLLGELSMHLNHRVSGGSQSLRMHYMETLKSAFYAPMLEKGADGVPDTIAMLDSYGLSKQDLTESCHAWPFFTLRWLQEFQFKGITTDWFARVPGAVKSKLTRAYNASTHRSQAL 801          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: A0A835YT94_9STRA (P-loop containing nucleoside triphosphate hydrolase protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YT94_9STRA)

HSP 1 Score: 115 bits (287), Expect = 3.180e-25
Identity = 71/189 (37.57%), Postives = 94/189 (49.74%), Query Frame = 0
Query:   13 AAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAG--------------------VSGGTEAVRLSYIH--------------------------------FLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSG 149
            A A+ A+SDA++    +RGDV HWELLP  AAL++RVG    G +GFP FP+WLG  S   KRRRL+ E++TH+NA                     V+   EAV L Y+                                  L R++T+PLR  GA G    +A+L+EYGLSRDDL E + +  L G
Sbjct:  374 ARAADAISDAELAGSMVRGDVNHWELLPLYAALHLRVGLECDGYIGFPGFPQWLGKNSAATKRRRLVAEINTHMNARQARTPSPDNDHLPLESLLSLVNAEREAVWLDYVSSSVLSVRLIVIQSEREKRVXXXXXXXXXXXVPVLTRVITEPLRSAGADGVGEAMAMLDEYGLSRDDLLESMADLTLKG 562          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: A0A448YV84_9STRA (Replication factor C subunit 1 n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448YV84_9STRA)

HSP 1 Score: 108 bits (271), Expect = 4.860e-23
Identity = 69/177 (38.98%), Postives = 99/177 (55.93%), Query Frame = 0
Query:   15 ASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGGGSLG-----FPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLK-RLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQAL 185
            A+ ++SD D++  ++RG   +W LLP  + L V+ G   GG  G     FPEF  W+G  S   K  RLL ELS H+N  VS   + +R +Y+  L+ R+L    R +  A   A + L+++YGLSRDD+ + L   +L  K         F  LDSK ++A TR YNA +H+SQAL
Sbjct:  757 AADSMSDYDMVESQIRGGDLNWSLLPTTSMLAVKTGYHAGGDTGGFLGGFPEFTAWMGKNSSMGKNYRLLSELSHHMNYKVSANDQELRQAYVPVLRDRILGLLSRADPDANKEA-IDLMDDYGLSRDDVVDKLNVLILGKKDFS------FEDLDSKAKAAFTRQYNAGSHRSQAL 926          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: A0A7S1Z658_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1Z658_TRICV)

HSP 1 Score: 105 bits (263), Expect = 4.930e-22
Identity = 69/183 (37.70%), Postives = 94/183 (51.37%), Query Frame = 0
Query:   18 AVSDADIISGKMRGDVQHWELLPAQAALNVRVGSIGGGSLG-----FPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLRE---------EGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQALA 186
            A+SD  +    +RG  Q W LLP  + L V+ G   GG+ G     +PEF  WLG  S   ++ RLL EL  H+N  VS     +RL Y+  L+  L   +           +G  GA   +A+++EYGL RDD+FE L EF L     +      F  LD+K+++A TR YN   H SQALA
Sbjct:  456 AMSDYAVADHFVRGGDQAWALLPLCSVLAVKTGHHAGGTRGGFLPGYPEFAGWLGKNSARGRKVRLLQELDRHMNYRVSADRTELRLRYVPALRGTLLNLMTGGGTDGGGSGQGKGGASRVIAMMDEYGLDRDDVFENLDEFNLDKSAGR------FADLDAKSKAAFTREYNKGVHMSQALA 632          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: UPI000711E472 (replication factor C subunit 1 n=1 Tax=Blastocystis sp. subtype 4 TaxID=944170 RepID=UPI000711E472)

HSP 1 Score: 103 bits (257), Expect = 3.210e-21
Identity = 58/146 (39.73%), Postives = 79/146 (54.11%), Query Frame = 0
Query:   35 HWELLPAQAALNVRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAH 180
            +W LLP+ A + +R G    G   FP FP  LG YS   K  R +GEL TH+N  ++G   AV + Y   L + L +PL +E   G    +  ++EYG++RDDL +VL    L G+G  R     F  +  KTRS+ TR YN Q H
Sbjct:  600 NWSLLPSMAMITIRGGMKATGKYVFPRFPMMLGKYSTIRKNMRTVGELQTHINMNITGSRRAVVMDYFDMLNQYLLRPLTQEDVHGT---IERMDEYGITRDDLVDVLNGTQL-GQGKTR-----FEQIPGKTRSSFTRIYNGQNH 736          
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Match: A0A1B5KTF5_USTVR (Replication factor C subunit 1 n=2 Tax=Ustilaginoidea virens TaxID=1159556 RepID=A0A1B5KTF5_USTVR)

HSP 1 Score: 99.8 bits (247), Expect = 7.100e-20
Identity = 63/182 (34.62%), Postives = 98/182 (53.85%), Query Frame = 0
Query:   15 ASAAVSDADIISGKMRGDVQHWELLPAQAALN-VRVGSIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLSYIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGKGMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQAL-AVALQAPKK 194
            A+ ++SD D++   + G  QHW L+P  A  + VR  S   G L    F  WLGNYS++NK  R + EL +H+    SG    VR  Y+  L + L   L+ +G    P  + L++ Y ++R+D F+ + E    G G   P +D    +++KT++A TR YNA +H    + A ++ APKK
Sbjct:  754 AAESISDGDLVDRMIHGPQQHWSLMPTHAVFSTVRPASFVAGQLMGSGFTSWLGNYSKQNKLGRYVRELHSHMRLKSSGDHNEVRQQYMPVLWKELVDRLQRDGTDAVPRVIELMDSYFITRED-FDAIQEL---GVG---PMIDEDVRVETKTKAAFTRTYNAMSHPVPFMKASSVVAPKK 928          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7095.15266.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LND0_ECTSI1.530e-11795.43Replication factor C subunit 1 n=2 Tax=Ectocarpus ... [more]
A0A7S2WPH2_9STRA4.670e-4953.93Hypothetical protein n=2 Tax=Rhizochromulina marin... [more]
F0XZ23_AURAN4.640e-3244.77AAA domain-containing protein n=1 Tax=Aureococcus ... [more]
B8C9T1_THAPS2.250e-2940.91Replication factor C subunit 1 n=1 Tax=Thalassiosi... [more]
A0A812KXV0_9DINO2.800e-2942.46Replication factor C subunit 1 n=1 Tax=Symbiodiniu... [more]
A0A835YT94_9STRA3.180e-2537.57P-loop containing nucleoside triphosphate hydrolas... [more]
A0A448YV84_9STRA4.860e-2338.98Replication factor C subunit 1 n=1 Tax=Pseudo-nitz... [more]
A0A7S1Z658_TRICV4.930e-2237.70Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
UPI000711E4723.210e-2139.73replication factor C subunit 1 n=1 Tax=Blastocysti... [more]
A0A1B5KTF5_USTVR7.100e-2034.62Replication factor C subunit 1 n=2 Tax=Ustilaginoi... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D1.20.272.10coord: 4..59
e-value: 3.4E-5
score: 25.5
NoneNo IPR availablePANTHERPTHR23389:SF6REPLICATION FACTOR C SUBUNIT 1coord: 13..226
NoneNo IPR availablePANTHERPTHR23389CHROMOSOME TRANSMISSION FIDELITY FACTOR 18coord: 13..226
IPR013725DNA replication factor RFC1, C-terminalPFAMPF08519RFC1coord: 19..176
e-value: 5.8E-39
score: 133.8
IPR008921DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminalSUPERFAMILY48019post-AAA+ oligomerization domain-likecoord: 11..86

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7095contigE_fasciculatus_S2_contig7095:277..4799 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7095.15266.1mRNA_E_fasciculatus_S2_contig7095.15266.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7095 130..6536 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7095.15266.1 ID=prot_E_fasciculatus_S2_contig7095.15266.1|Name=mRNA_E_fasciculatus_S2_contig7095.15266.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=277bp
MQVDARVRSDVTAAASAAVSDADIISGKMRGDVQHWELLPAQAALNVRVG
SIGGGSLGFPEFPKWLGNYSRENKRRRLLGELSTHLNAGVSGGTEAVRLS
YIHFLKRLLTQPLREEGAAGAPACVALLEEYGLSRDDLFEVLPEFVLSGK
GMKRPPLDVFGSLDSKTRSAVTRCYNAQAHKSQALAVALQAPKKAKKRKA
PPKSVSMEGEDGDDDGGDESEEEEEDNDVSAFKKKVRIYVVVVLGSPAPR
PRPQRRARPRLTPDPKRPRSKGDQEV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008921DNA_pol3_clamp-load_cplx_C
IPR013725DNA_replication_fac_RFC1_C