prot_E_fasciculatus_S2_contig7081.15249.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7081.15249.1
Unique Nameprot_E_fasciculatus_S2_contig7081.15249.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length317
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7081.15249.1 vs. uniprot
Match: D7FSD5_ECTSI (Mitochondrial import receptor, Tom70 homolog n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FSD5_ECTSI)

HSP 1 Score: 494 bits (1271), Expect = 4.050e-168
Identity = 264/305 (86.56%), Postives = 277/305 (90.82%), Query Frame = 0 
Query:    1 MQEAAITRELKDAEKAGKEGGGSASVTNTASASRVSSLLDRSLLRMVKRNYDGSREDIFEAADLLSALTEAGASEAAGAEGVPSDVQASVWEWQGTFLQLSGKLDKAMEAYRRCGEGMEAGGEDYPADVLIKMAWVSMDKEDMDAAKDFFARAGVAHPEYGSSFAHRARVDAEKDGAEQVKSFLDKAIALNSEDAFAWEQLCGIHVQAGDIPKATATIEEGLRSVPKSDALLTLKAELKYSMAMKAGDASSCTEILELFDEAIRANPSSPVLYLNKASCLLQMMSDVGAAMEMLEKGVSVDPTSV 305
            M+E AITRELKDAEKAGKEG GSAS T T SASRVSSLLDR LLRMVKRNYDG+REDIFEAA+LLS LTEA  SEA GA+ VP  V+ASVWEWQGTFLQLSGKLD+AMEAYRRCGE MEA GE+YPADVLIKMAWV MDKEDMDAAKD FARAG AHPEYGSSFAHRAR+D+EKDGAEQV+SFL KAI LNSEDAFAWEQLC IHVQAGDIPKAT+TIEEGL  VP SDALLTLKAELKYSMAMKAGDASSC  ILE+FD AIRANPSSPVLYLNKASCLLQMMSDVG AME+LEKGVSVDPTSV
Sbjct:  371 MEETAITRELKDAEKAGKEGDGSASATTT-SASRVSSLLDRGLLRMVKRNYDGAREDIFEAAELLSTLTEADPSEA-GADEVPPHVKASVWEWQGTFLQLSGKLDEAMEAYRRCGEEMEAEGEEYPADVLIKMAWVCMDKEDMDAAKDLFARAGEAHPEYGSSFAHRARLDSEKDGAEQVRSFLRKAIELNSEDAFAWEQLCRIHVQAGDIPKATSTIEEGLEFVPNSDALLTLKAELKYSMAMKAGDASSCAAILEVFDAAIRANPSSPVLYLNKASCLLQMMSDVGGAMELLEKGVSVDPTSV 673
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BLAST of mRNA_E_fasciculatus_S2_contig7081.15249.1 vs. uniprot
Match: A0A6H5KBR6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KBR6_9PHAE)

HSP 1 Score: 139 bits (350), Expect = 7.680e-36
Identity = 72/78 (92.31%), Postives = 74/78 (94.87%), Query Frame = 0 
Query:  206 VQAGDIPKATATIEEGLRSVPKSDALLTLKAELKYSMAMKAGDASSCTEILELFDEAIRANPSSPVLYLNKASCLLQM 283
            V AGDIPKATATIEEGL+SVPKSDALLTLKAELKYSMAMKAGDASSC  ILELFD AIRANPSSPVLYLNKASCLLQ+
Sbjct:  162 VGAGDIPKATATIEEGLKSVPKSDALLTLKAELKYSMAMKAGDASSCGAILELFDAAIRANPSSPVLYLNKASCLLQV 239
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BLAST of mRNA_E_fasciculatus_S2_contig7081.15249.1 vs. uniprot
Match: A0A534TXG3_9DELT (Tetratricopeptide repeat protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534TXG3_9DELT)

HSP 1 Score: 60.8 bits (146), Expect = 1.300e-6
Identity = 54/180 (30.00%), Postives = 84/180 (46.67%), Query Frame = 0 
Query:  128 DVLIKMAWVSMDKEDMDAAKDFFARAGVAHP---EYGSSFAHRARVDAEKDGAEQVKSFLDKAIALNSEDAFAWEQLCGIHVQ-AGDIPKATATIEEGLRSVPKSDALLTLKAELKYSMAMKAGDASSCTEILELFDEAIRANPSSPVLYLNKASCLLQMMSDVGAAMEMLEKGVSVDPT 303
            + L  MA+          A D++A+     P   +  S+  + A   A+ D         + A+A  +  A A+  L  I+ +  GD+PKA A +E+GLR  P   +L+T K  + Y M+   GD+      +ELFD AI  +P +   YLNK   L QM  +       +EK + +DPT
Sbjct:  488 EALSMMAYALAQSGRYPEALDYYAQCFAKKPHNRDVASNVEYVAAQAAQHDDVRTAVRAFEMALA-EAPSAAAYGALGEIYAKDLGDLPKARAYLEDGLRLAPDDVSLMT-KLGIVYGMS---GDSERA---VELFDRAISRDPGNATAYLNKGMALRQM-GNTADGDRFVEKALQIDPT 658
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7081.15249.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
D7FSD5_ECTSI4.050e-16886.56Mitochondrial import receptor, Tom70 homolog n=2 T... [more]
A0A6H5KBR6_9PHAE7.680e-3692.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A534TXG3_9DELT1.300e-630.00Tetratricopeptide repeat protein n=1 Tax=Deltaprot... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 23..314
e-value: 1.0E-24
score: 89.2
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 89..304
NoneNo IPR availablePANTHERPTHR46208FAMILY NOT NAMEDcoord: 37..304
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 127..304
score: 17.109

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7081contigE_fasciculatus_S2_contig7081:370..6911 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7081.15249.1mRNA_E_fasciculatus_S2_contig7081.15249.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7081 370..6929 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7081.15249.1 ID=prot_E_fasciculatus_S2_contig7081.15249.1|Name=mRNA_E_fasciculatus_S2_contig7081.15249.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=317bp
MQEAAITRELKDAEKAGKEGGGSASVTNTASASRVSSLLDRSLLRMVKRN
YDGSREDIFEAADLLSALTEAGASEAAGAEGVPSDVQASVWEWQGTFLQL
SGKLDKAMEAYRRCGEGMEAGGEDYPADVLIKMAWVSMDKEDMDAAKDFF
ARAGVAHPEYGSSFAHRARVDAEKDGAEQVKSFLDKAIALNSEDAFAWEQ
LCGIHVQAGDIPKATATIEEGLRSVPKSDALLTLKAELKYSMAMKAGDAS
SCTEILELFDEAIRANPSSPVLYLNKASCLLQMMSDVGAAMEMLEKGVSV
DPTSVVRVWLAKMGMLV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013026TPR-contain_dom
IPR011990TPR-like_helical_dom_sf