mRNA_E_fasciculatus_S2_contig708.15244.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE) HSP 1 Score: 623 bits (1607), Expect = 1.620e-223 Identity = 322/350 (92.00%), Postives = 333/350 (95.14%), Query Frame = 2
Query: 2 NGNSAMLKLLLSKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGVDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKGARAFGVRIYRPTVARFFATRFARY 1051
NGN+AMLKLL+SKGADLETEARFPAGSRAIHAAISGENPTAL VLLEAGADFNSRDGA GETPLMLT LADTGALLARELFKVGA PFVKNADGMSAMHVAAGLGNLEVMTVIL N PSALNVLDNKGFTPMGIAALRGQRRAVFHLLS GASDLGVDEQ+AAI WACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKIL+MLVSAEGEENRRKWAEC L +GTPLHLAAAWVS+RAIHVLLSAGARETL N YGKLASEEVGIALRPPA RSPRKEAAV RML+RGPAYRARSYGWPTLDGGNGTSDVTLSSRT+GA +FGV+I+RPT RFFATRFARY
Sbjct: 50 NGNAAMLKLLISKGADLETEARFPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGA-GETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGANSFGVQIFRPTGTRFFATRFARY 398
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI) HSP 1 Score: 621 bits (1601), Expect = 9.890e-222 Identity = 318/350 (90.86%), Postives = 332/350 (94.86%), Query Frame = 2
Query: 2 NGNSAMLKLLLSKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGVDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKGARAFGVRIYRPTVARFFATRFARY 1051
NGN+AMLKLL+SKGA+LETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGA GETPLMLT LADTGALLARELFKVGA PFVKNADGMSAMHVAAGLGNLEVMTVIL N PS LNVLDNKGFTPMGIAALRGQRRAVFHLLS GASDLGVDEQ+AAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKIL+MLVSAEGE+NRRKWAEC L +GTPLHLAAAWVS+R +HVLLSAGARETL NRYGKLA EEVGIAL PPA RSPRKEAAV RML+RGPAYRARSYGWPTLDGGNGTSDV LSSRT+GA++FGV+IYRPT RFFATRFARY
Sbjct: 105 NGNTAMLKLLISKGANLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGA-GETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAKSFGVQIYRPTGTRFFATRFARY 453
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI) HSP 1 Score: 184 bits (468), Expect = 3.890e-51 Identity = 142/370 (38.38%), Postives = 196/370 (52.97%), Query Frame = 2
Query: 5 GNSAMLKLLLSKGADLETEAR-------------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGL----ADTGALLARELFKVGADPFVKNADGM-SAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLG--VDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTP-LHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKGARAFGVRIYRPTVARFFATRFARY 1051
G +LKLL+ GADL+ + F G+ +H A++GEN AL +LL AGAD N DG KG TPLM+T L A L A +A+HVAA +++ ++L+ APS +N+ + KG T + AA G AV LLS GA D ++ A + GH ++VR++L+ G+ VGG A+ ++ ++ R +IL+ML+ EGE+ R KWA +GTP LHLAAA S+ A +LL AGA E N K AS VG AL P ++P AAV R+LERGPA+RARS+ W + T+ S G VRI+RPT +FF+ RF+RY
Sbjct: 50 GRIDILKLLIDNGADLDGTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADG-KGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAAL-PANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEAPAASGTVCSMKGGRATLDVRIFRPTGNQFFSARFSRY 417
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI) HSP 1 Score: 175 bits (443), Expect = 1.510e-47 Identity = 134/347 (38.62%), Postives = 191/347 (55.04%), Query Frame = 2
Query: 5 GNSAMLKLLLSKGADLETEA----RFPAGSRAIHAAISGENPTALCVLLE---AGADFNSRDGAKGETPLMLTGLADTGAL----LARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAP-SALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGVDE-------QSAAIFWACDGGHPRMVRMML-EHGINRVGGLGAI-PNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPL-HLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKG 979
G+++M+K L+ KGAD+ + FP+GSRAIH A+S AL L E AGAD N R+ +G TPLM+ D LAREL K G D + +ADG +A+H AA GN ++ +L+ S LN+ G TP+ +A V LLS GAS G+ E +SAA G+ ++R++ E G++ VGG A+ PNS+ A + +A+IL++L++AEG+E + WA L G PL +LAAA+ + + VLL+AGA ET T+ G A E +G L P P + AA+ R L+RGPAYRARS+ WP + D + +G
Sbjct: 51 GSASMIKFLVDKGADINSSTWRPGAFPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRN-YQGCTPLMMACRVDKEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAAL-----GYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQL-PSGTLDPLEAAAIGRELQRGPAYRARSWAWPVGEDAPVAGDAGAAGALRG 390
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Ankyrin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI) HSP 1 Score: 169 bits (429), Expect = 5.310e-44 Identity = 113/293 (38.57%), Postives = 157/293 (53.58%), Query Frame = 2
Query: 77 GSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGA------LLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASD--LGVDEQSAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQ--AKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWP 922
G RA+H AI+ N +LL+AGAD +S +G KG TPLMLT + + A ++ARE +A+ AA ++ ++L AP+ LN G TP+ AA+ G+ +AV HLLS GA ++ + A H +VR++L + G+ +GG IP ++G A R+ A I++ML+SAEG E WA C LH A ++ +I A VLL+AGA ET N G+ A E VG P R P K+ A+ RMLERGPAYRARS+ WP
Sbjct: 189 GVRALHVAINHYNVDVFRLLLKAGADPDSANG-KGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNA-PSLQRDPAKKGAIVRMLERGPAYRARSWAWP 479
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE) HSP 1 Score: 150 bits (379), Expect = 4.300e-39 Identity = 105/274 (38.32%), Postives = 155/274 (56.57%), Query Frame = 2
Query: 2 NGNSAMLKLLLSKGADLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLM----LTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASD--LGVDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARE 772
+G + ++ LL +GA+LE + +GS A+HAA+ +L LL+AGAD N+ D A G TPLM L G AD ++ REL + GADP ++ +GM A+H A+ + +V+ ++L A + LN G TP+ AA G + +V LLS GASD L + ++A+ A G +VR++L+HG++ VGGLGA+P +I A + AKIL ML++ GEE RR+WA T LH A + S+ + +LSAGA E
Sbjct: 46 HGRAGVVTLLAKRGAELEATCPRDVRDDRGMYVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAAD-ATGHTPLMQACRLFGAADR-YVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDHGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAGADE 317
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME7_ECTSI) HSP 1 Score: 121 bits (304), Expect = 1.800e-28 Identity = 84/234 (35.90%), Postives = 128/234 (54.70%), Query Frame = 2
Query: 65 RFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLT---GLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGV--DEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTP----LHLAAAWVSIRA 739
+ P G + AA+ AL +L AGAD N+ DG G L + G + + REL K GA+P ++ SA+H AA G+ + T +LA AP+ LN+++ +G TP+G A G+ +AV LLS GASD V + +S ++ A GH ++ ++L G+ VGGL +IP+++G AV + + L +L+S EGEE R WA + + LH AA + S+ A
Sbjct: 12 KIPKGLGLVSAAVIVRRIPALQCVLRAGADPNTPDGV-GCNALQVACFDGDDERRLCIVRELLKWGANPNLRGGPYGSALHTAAKEGHTNLFTTLLAAAPATLNLVNEQGLTPLGTATSFGRHKAVTCLLSLGASDRQVFQETRSGSLQEAVVAGHDTLLSLLLGKGLEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSVEGEERRTFWARTRVSDDYSGKCMLHFAAEFTSLSA 244
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ9_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 4.530e-12 Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 2
Query: 239 LFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGV-DEQSAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSI 733
+ + GADP DG N + T +LA AP+ LN++D +G TP+ A GQ +AV LLS GASD V E + GH ++ ++L G VGGL +IP+++G AV + + L +L+S EG E R + + C + P W+S+
Sbjct: 33 VLRAGADP--NTPDGQR---------NTNLFTTLLAAAPARLNLVDEQGLTPLETATSFGQHKAVTCLLSPGASDRQVFQETRSGSLQEAVAGHDTLLPLLLFGKGFEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSVEGGEARGR-SSC---SSRPGQTKQRWISM 184
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IV76_STRMM) HSP 1 Score: 66.2 bits (160), Expect = 3.700e-8 Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 2
Query: 86 AIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGAS-DLGVDEQSAAIFWACDGGHPRMVRMMLE 544
A+HAA + + A+ VL +AGA + D K TPL + + + ++ R L + G + + DGM++MH+AA +GNLE +N+LD+ G+TP+ + + V LL GA ++ +EQ+ A+ WA G + + L
Sbjct: 498 ALHAACANGHLIAVHVLQQAGAKLDCVDD-KLRTPLTVA-VENKQTVIIRYLIRAGVNLEARGEDGMTSMHIAAKMGNLEACRCFFETRKLNINLLDDGGWTPLVWGSEHRHKDVVRFLLECGADPNVRDNEQNIALHWAAFSGSSEICELFLN 649
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: ankyrin (repeat and KH domain-containing protein 1-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFF635) HSP 1 Score: 65.5 bits (158), Expect = 5.000e-8 Identity = 84/277 (30.32%), Postives = 139/277 (50.18%), Query Frame = 2
Query: 5 GNSAMLKLLLSKGADLETEARFPAGSRAIH-AAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELF-KVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNV--LDNKGF---TPMGIAALRGQRRAVFHLLSKGASDLGVDEQSAAIFW-ACDGGHPRMVRMMLEHGINRVG--GLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARET-LTNRYGKLA 802
G+ +++LL+ KGAD+ G+ +H A G T VL D +SR G TP+M+ A G + EL GAD + + G + +H+A +++++ +L+ LNV +D++G+ TPM +AA RG R+ V LL+KGA VDE + I AC GGH MV+ +L + + G + +G A QG +++++LV+ EG + R LG+ LH A A +++ + ++LS + N+ G+ A
Sbjct: 253 GHIQVVELLVGKGADVSLVDGD--GNNTLHWACYGGHLETVKFVLSLNVVDIDSR-GIGSWTPVMVA--ARRGHMEVVELLVSKGADVSLVDVHGYNILHLACWGKHVKMVKFVLS-----LNVVDIDSRGYRRWTPMMVAARRGNRKVVALLLAKGADVSLVDEYNDNILHLACMGGHVNMVKFVLSLNVVDIDCRGFDSQTPVMGAARQGH-GEVVELLVN-EGADVR---LVDDLGDNI-LHHACAGGNMKTVKLVLSLNVVDVDARNKVGQTA 513 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig708.15244.1 >prot_E_fasciculatus_S2_contig708.15244.1 ID=prot_E_fasciculatus_S2_contig708.15244.1|Name=mRNA_E_fasciculatus_S2_contig708.15244.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=345bp MLKLLLSKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRback to top mRNA from alignment at E_fasciculatus_S2_contig708:1798..3056- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig708.15244.1 ID=mRNA_E_fasciculatus_S2_contig708.15244.1|Name=mRNA_E_fasciculatus_S2_contig708.15244.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1259bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig708:1798..3056- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig708:1798..3056- >mRNA_E_fasciculatus_S2_contig708.15244.1 ID=mRNA_E_fasciculatus_S2_contig708.15244.1|Name=mRNA_E_fasciculatus_S2_contig708.15244.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1035bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig708:1798..3056- (Ectocarpus fasciculatus EfasUO2)back to top |