mRNA_E_fasciculatus_S2_contig708.15244.1 (mRNA) Ectocarpus fasciculatus EfasUO2

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_E_fasciculatus_S2_contig708.15244.1
Unique NamemRNA_E_fasciculatus_S2_contig708.15244.1
TypemRNA
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Homology
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JK53_9PHAE)

HSP 1 Score: 623 bits (1607), Expect = 1.620e-223
Identity = 322/350 (92.00%), Postives = 333/350 (95.14%), Query Frame = 2
Query:    2 NGNSAMLKLLLSKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGVDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKGARAFGVRIYRPTVARFFATRFARY 1051
            NGN+AMLKLL+SKGADLETEARFPAGSRAIHAAISGENPTAL VLLEAGADFNSRDGA GETPLMLT LADTGALLARELFKVGA PFVKNADGMSAMHVAAGLGNLEVMTVIL N PSALNVLDNKGFTPMGIAALRGQRRAVFHLLS GASDLGVDEQ+AAI WACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKIL+MLVSAEGEENRRKWAEC L +GTPLHLAAAWVS+RAIHVLLSAGARETL N YGKLASEEVGIALRPPA RSPRKEAAV RML+RGPAYRARSYGWPTLDGGNGTSDVTLSSRT+GA +FGV+I+RPT  RFFATRFARY
Sbjct:   50 NGNAAMLKLLISKGADLETEARFPAGSRAIHAAISGENPTALSVLLEAGADFNSRDGA-GETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAILWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEENRRKWAECRLRDGTPLHLAAAWVSVRAIHVLLSAGARETLPNGYGKLASEEVGIALRPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVTLSSRTRGANSFGVQIFRPTGTRFFATRFARY 398          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G4M4_ECTSI)

HSP 1 Score: 621 bits (1601), Expect = 9.890e-222
Identity = 318/350 (90.86%), Postives = 332/350 (94.86%), Query Frame = 2
Query:    2 NGNSAMLKLLLSKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGVDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKGARAFGVRIYRPTVARFFATRFARY 1051
            NGN+AMLKLL+SKGA+LETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGA GETPLMLT LADTGALLARELFKVGA PFVKNADGMSAMHVAAGLGNLEVMTVIL N PS LNVLDNKGFTPMGIAALRGQRRAVFHLLS GASDLGVDEQ+AAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKIL+MLVSAEGE+NRRKWAEC L +GTPLHLAAAWVS+R +HVLLSAGARETL NRYGKLA EEVGIAL PPA RSPRKEAAV RML+RGPAYRARSYGWPTLDGGNGTSDV LSSRT+GA++FGV+IYRPT  RFFATRFARY
Sbjct:  105 NGNTAMLKLLISKGANLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGA-GETPLMLTALADTGALLARELFKVGASPFVKNADGMSAMHVAAGLGNLEVMTVILTNTPSVLNVLDNKGFTPMGIAALRGQRRAVFHLLSAGASDLGVDEQNAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILEMLVSAEGEDNRRKWAECRLRDGTPLHLAAAWVSVRVMHVLLSAGARETLPNRYGKLAGEEVGIALGPPARRSPRKEAAVVRMLQRGPAYRARSYGWPTLDGGNGTSDVALSSRTRGAKSFGVQIYRPTGTRFFATRFARY 453          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Similar (to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LDZ2_ECTSI)

HSP 1 Score: 184 bits (468), Expect = 3.890e-51
Identity = 142/370 (38.38%), Postives = 196/370 (52.97%), Query Frame = 2
Query:    5 GNSAMLKLLLSKGADLETEAR-------------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGL----ADTGALLARELFKVGADPFVKNADGM-SAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLG--VDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTP-LHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKGARAFGVRIYRPTVARFFATRFARY 1051
            G   +LKLL+  GADL+  +              F  G+  +H A++GEN  AL +LL AGAD N  DG KG TPLM+T L    A    L A                   +A+HVAA     +++ ++L+ APS +N+ + KG T +  AA  G   AV  LLS GA D          ++  A + GH ++VR++L+ G+  VGG  A+  ++  ++  R  +IL+ML+  EGE+ R KWA     +GTP LHLAAA  S+ A  +LL AGA E   N   K AS  VG AL P   ++P   AAV R+LERGPA+RARS+ W         +  T+ S   G     VRI+RPT  +FF+ RF+RY
Sbjct:   50 GRIDILKLLIDNGADLDGTSSLDKFADGFTGNLPFEGGTTPLHGALAGENLDALRLLLLAGADPNLADG-KGCTPLMMTCLKYFRAKNYVLTAXXXXXXXXXXXXXXXXXXXTALHVAATFNAPDLLGLLLSRAPSTVNLPNKKGVTALCYAASEGMEVAVSCLLSAGARDNPSLFANGIGSLLIAVELGHEQVVRVLLDRGVQAVGGELAMSYALRRSILKRFPRILQMLLDVEGEQKRVKWARLRHTDGTPALHLAAACESLVAASILLQAGADEGTANGLDKGASCCVGAAL-PANKKNPDTSAAVCRLLERGPAFRARSWAWAAESSEAPAASGTVCSMKGGRATLDVRIFRPTGNQFFSARFSRY 417          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4_ECTSI)

HSP 1 Score: 175 bits (443), Expect = 1.510e-47
Identity = 134/347 (38.62%), Postives = 191/347 (55.04%), Query Frame = 2
Query:    5 GNSAMLKLLLSKGADLETEA----RFPAGSRAIHAAISGENPTALCVLLE---AGADFNSRDGAKGETPLMLTGLADTGAL----LARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAP-SALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGVDE-------QSAAIFWACDGGHPRMVRMML-EHGINRVGGLGAI-PNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPL-HLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWPTLDGGNGTSDVTLSSRTKG 979
            G+++M+K L+ KGAD+ +       FP+GSRAIH A+S     AL  L E   AGAD N R+  +G TPLM+    D        LAREL K G D  + +ADG +A+H AA  GN  ++  +L+    S LN+    G TP+ +A        V  LLS GAS  G+ E       +SAA       G+  ++R++  E G++ VGG  A+ PNS+  A +  +A+IL++L++AEG+E +  WA   L  G PL +LAAA+  +  + VLL+AGA ET T+  G  A E +G  L P     P + AA+ R L+RGPAYRARS+ WP  +      D   +   +G
Sbjct:   51 GSASMIKFLVDKGADINSSTWRPGAFPSGSRAIHVAVSSGYAGALDALRELIKAGADLNGRN-YQGCTPLMMACRVDKEGAERVELARELLKAGVDTTLVDADGRAALHYAAYSGNEALIQALLSKGSLSTLNLATQDGKTPLCVAVEFVHCGVVSLLLSAGASQRGLQEGNYPCPFRSAAAL-----GYESILRILCSERGMDAVGGGAAVLPNSLACATRRGKARILRLLLAAEGQERQEHWARRRLVLGRPLVYLAAAYGILANVKVLLAAGADETETDPDGYAAPEVIGGQL-PSGTLDPLEAAAIGRELQRGPAYRARSWAWPVGEDAPVAGDAGAAGALRG 390          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Ankyrin (n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LSK8_ECTSI)

HSP 1 Score: 169 bits (429), Expect = 5.310e-44
Identity = 113/293 (38.57%), Postives = 157/293 (53.58%), Query Frame = 2
Query:   77 GSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGA------LLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASD--LGVDEQSAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQ--AKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYGWP 922
            G RA+H AI+  N     +LL+AGAD +S +G KG TPLMLT + +  A      ++ARE                +A+  AA      ++ ++L  AP+ LN     G TP+  AA+ G+ +AV HLLS GA       ++    +  A    H  +VR++L + G+  +GG   IP ++G A   R+  A I++ML+SAEG E    WA C       LH A ++ +I A  VLL+AGA ET  N  G+ A E VG    P   R P K+ A+ RMLERGPAYRARS+ WP
Sbjct:  189 GVRALHVAINHYNVDVFRLLLKAGADPDSANG-KGLTPLMLTCILEDSARGEQRAVMAREXXXXXXXXXXXXXXXKTALGFAAARDQTNLIDILLQKAPTTLNRATPDGLTPLYAAAMSGKGKAVSHLLSAGARQPPASAEKDMCPLVAAVRENHQEVVRVLLTDRGMKAIGGADVIPRAVGAAASARKGRASIVRMLLSAEGHEREGHWARCRYKEDPVLHSAVSFGNISATRVLLAAGADETAENEDGRPAREVVGFNA-PSLQRDPAKKGAIVRMLERGPAYRARSWAWP 479          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAW5_9PHAE)

HSP 1 Score: 150 bits (379), Expect = 4.300e-39
Identity = 105/274 (38.32%), Postives = 155/274 (56.57%), Query Frame = 2
Query:    2 NGNSAMLKLLLSKGADLETEAR-----------FPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLM----LTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASD--LGVDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARE 772
            +G + ++ LL  +GA+LE               + +GS A+HAA+      +L  LL+AGAD N+ D A G TPLM    L G AD   ++ REL + GADP  ++ +GM A+H A+   + +V+ ++L  A + LN     G TP+  AA  G + +V  LLS GASD  L   + ++A+  A   G   +VR++L+HG++ VGGLGA+P +I  A +   AKIL ML++  GEE RR+WA       T LH A +  S+  +  +LSAGA E
Sbjct:   46 HGRAGVVTLLAKRGAELEATCPRDVRDDRGMYVYSSGSPAVHAAVYARRVDSLRALLDAGADPNAAD-ATGHTPLMQACRLFGAADR-YVVVRELLRGGADPARQSDNGMIALHYASFRDDTDVIGLLLPKAMATLNQDTGYGGTPLCCAASGGYKESVRCLLSFGASDNALWSKKGASALVGAVQEGRQEIVRILLDHGMDAVGGLGAVPKAIWTATRKGHAKILHMLLAVAGEETRRQWATMPYNESTLLHCATSVGSLSVMSAILSAGADE 317          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LME7_ECTSI)

HSP 1 Score: 121 bits (304), Expect = 1.800e-28
Identity = 84/234 (35.90%), Postives = 128/234 (54.70%), Query Frame = 2
Query:   65 RFPAGSRAIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLT---GLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGV--DEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTP----LHLAAAWVSIRA 739
            + P G   + AA+      AL  +L AGAD N+ DG  G   L +    G  +    + REL K GA+P ++     SA+H AA  G+  + T +LA AP+ LN+++ +G TP+G A   G+ +AV  LLS GASD  V  + +S ++  A   GH  ++ ++L  G+  VGGL +IP+++G AV   + + L +L+S EGEE R  WA   + +       LH AA + S+ A
Sbjct:   12 KIPKGLGLVSAAVIVRRIPALQCVLRAGADPNTPDGV-GCNALQVACFDGDDERRLCIVRELLKWGANPNLRGGPYGSALHTAAKEGHTNLFTTLLAAAPATLNLVNEQGLTPLGTATSFGRHKAVTCLLSLGASDRQVFQETRSGSLQEAVVAGHDTLLSLLLGKGLEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSVEGEERRTFWARTRVSDDYSGKCMLHFAAEFTSLSA 244          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ9_9PHAE)

HSP 1 Score: 74.7 bits (182), Expect = 4.530e-12
Identity = 56/167 (33.53%), Postives = 84/167 (50.30%), Query Frame = 2
Query:  239 LFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDLGV-DEQSAAIFWACDGGHPRMVRMML-EHGINRVGGLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSI 733
            + + GADP     DG           N  + T +LA AP+ LN++D +G TP+  A   GQ +AV  LLS GASD  V  E  +        GH  ++ ++L   G   VGGL +IP+++G AV   + + L +L+S EG E R + + C   +  P      W+S+
Sbjct:   33 VLRAGADP--NTPDGQR---------NTNLFTTLLAAAPARLNLVDEQGLTPLETATSFGQHKAVTCLLSPGASDRQVFQETRSGSLQEAVAGHDTLLPLLLFGKGFEAVGGLDSIPDAMGCAVTKSRTRTLNLLLSVEGGEARGR-SSC---SSRPGQTKQRWISM 184          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: Uncharacterized (protein n=1 Tax=Strigamia maritima TaxID=126957 RepID=T1IV76_STRMM)

HSP 1 Score: 66.2 bits (160), Expect = 3.700e-8
Identity = 47/154 (30.52%), Postives = 79/154 (51.30%), Query Frame = 2
Query:   86 AIHAAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGAS-DLGVDEQSAAIFWACDGGHPRMVRMMLE 544
            A+HAA +  +  A+ VL +AGA  +  D  K  TPL +  + +   ++ R L + G +   +  DGM++MH+AA +GNLE            +N+LD+ G+TP+   +    +  V  LL  GA  ++  +EQ+ A+ WA   G   +  + L 
Sbjct:  498 ALHAACANGHLIAVHVLQQAGAKLDCVDD-KLRTPLTVA-VENKQTVIIRYLIRAGVNLEARGEDGMTSMHIAAKMGNLEACRCFFETRKLNINLLDDGGWTPLVWGSEHRHKDVVRFLLECGADPNVRDNEQNIALHWAAFSGSSEICELFLN 649          
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Match: ankyrin (repeat and KH domain-containing protein 1-like n=1 Tax=Haliotis rufescens TaxID=6454 RepID=UPI001EAFF635)

HSP 1 Score: 65.5 bits (158), Expect = 5.000e-8
Identity = 84/277 (30.32%), Postives = 139/277 (50.18%), Query Frame = 2
Query:    5 GNSAMLKLLLSKGADLETEARFPAGSRAIH-AAISGENPTALCVLLEAGADFNSRDGAKGETPLMLTGLADTGALLARELF-KVGADPFVKNADGMSAMHVAAGLGNLEVMTVILANAPSALNV--LDNKGF---TPMGIAALRGQRRAVFHLLSKGASDLGVDEQSAAIFW-ACDGGHPRMVRMMLEHGINRVG--GLGAIPNSIGVAVQGRQAKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGARET-LTNRYGKLA 802
            G+  +++LL+ KGAD+        G+  +H A   G   T   VL     D +SR G    TP+M+   A  G +   EL    GAD  + +  G + +H+A    +++++  +L+     LNV  +D++G+   TPM +AA RG R+ V  LL+KGA    VDE +  I   AC GGH  MV+ +L   +  +   G  +    +G A QG   +++++LV+ EG + R       LG+   LH A A  +++ + ++LS    +    N+ G+ A
Sbjct:  253 GHIQVVELLVGKGADVSLVDGD--GNNTLHWACYGGHLETVKFVLSLNVVDIDSR-GIGSWTPVMVA--ARRGHMEVVELLVSKGADVSLVDVHGYNILHLACWGKHVKMVKFVLS-----LNVVDIDSRGYRRWTPMMVAARRGNRKVVALLLAKGADVSLVDEYNDNILHLACMGGHVNMVKFVLSLNVVDIDCRGFDSQTPVMGAARQGH-GEVVELLVN-EGADVR---LVDDLGDNI-LHHACAGGNMKTVKLVLSLNVVDVDARNKVGQTA 513          
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig708.15244.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
Uncharacterized1.620e-22392.00protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized9.890e-22290.86protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Similar3.890e-5138.38to ankyrin 2,3/unc44 n=1 Tax=Ectocarpus siliculosu... [more]
Uncharacterized1.510e-4738.62protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSK4... [more]
Ankyrin5.310e-4438.57n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8... [more]
Uncharacterized4.300e-3938.32protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized1.800e-2835.90protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 ... [more]
Uncharacterized4.530e-1233.53protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=... [more]
Uncharacterized3.700e-830.52protein n=1 Tax=Strigamia maritima TaxID=126957 Re... [more]
ankyrin5.000e-830.32repeat and KH domain-containing protein 1-like n=1... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig708contigE_fasciculatus_S2_contig708:1798..3056 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-19
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Properties
Property NameValue
Taxonomic scopeEukaryota
Stop0
Start1
Seed ortholog score617.5
Seed ortholog evalue3.9e-174
Seed eggNOG ortholog2880.D7G4M4
Model size1051
KEGG koko:K10324,ko:K21435
Hectar predicted targeting categoryother localisation
GOsGO:0001654,GO:0001736,GO:0001737,GO:0001738,GO:0001745,GO:0002009,GO:0002165,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0007163,GO:0007164,GO:0007275,GO:0007399,GO:0007423,GO:0007444,GO:0007472,GO:0007476,GO:0007552,GO:0007560,GO:0008150,GO:0008544,GO:0009653,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009913,GO:0009987,GO:0016043,GO:0022008,GO:0030030,GO:0030154,GO:0030182,GO:0030855,GO:0032501,GO:0032502,GO:0035107,GO:0035114,GO:0035120,GO:0035220,GO:0035239,GO:0035295,GO:0035315,GO:0035316,GO:0035317,GO:0042067,GO:0044424,GO:0044464,GO:0048513,GO:0048563,GO:0048569,GO:0048592,GO:0048699,GO:0048707,GO:0048729,GO:0048731,GO:0048736,GO:0048737,GO:0048749,GO:0048856,GO:0048869,GO:0060429,GO:0060562,GO:0071840,GO:0090596,GO:0120036
Exons2
EggNOG free text desc.response to abiotic stimulus
EggNOG OGsCOG0666@1,KOG0504@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-07_000040.1
Cds size1035
COG Functional cat.G
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03036,ko04121
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842368.2979872-CDS-E_fasciculatus_S2_contig708:1797..20521696842368.2979872-CDS-E_fasciculatus_S2_contig708:1797..2052Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig708 1798..2052 -
1696842368.3102586-CDS-E_fasciculatus_S2_contig708:2260..30401696842368.3102586-CDS-E_fasciculatus_S2_contig708:2260..3040Ectocarpus fasciculatus EfasUO2CDSE_fasciculatus_S2_contig708 2261..3040 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1696842368.3210778-UTR-E_fasciculatus_S2_contig708:3040..30561696842368.3210778-UTR-E_fasciculatus_S2_contig708:3040..3056Ectocarpus fasciculatus EfasUO2UTRE_fasciculatus_S2_contig708 3041..3056 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig708.15244.1prot_E_fasciculatus_S2_contig708.15244.1Ectocarpus fasciculatus EfasUO2polypeptideE_fasciculatus_S2_contig708 1798..3040 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_E_fasciculatus_S2_contig708.15244.1

>prot_E_fasciculatus_S2_contig708.15244.1 ID=prot_E_fasciculatus_S2_contig708.15244.1|Name=mRNA_E_fasciculatus_S2_contig708.15244.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=345bp
MLKLLLSKGADLETEARFPAGSRAIHAAISGENPTALCVLLEAGADFNSR
DGAKGETPLMLTGLADTGALLARELFKVGADPFVKNADGMSAMHVAAGLG
NLEVMTVILANAPSALNVLDNKGFTPMGIAALRGQRRAVFHLLSKGASDL
GVDEQSAAIFWACDGGHPRMVRMMLEHGINRVGGLGAIPNSIGVAVQGRQ
AKILKMLVSAEGEENRRKWAECGLGNGTPLHLAAAWVSIRAIHVLLSAGA
RETLTNRYGKLASEEVGIALRPPAGRSPRKEAAVFRMLERGPAYRARSYG
WPTLDGGNGTSDVTLSSRTKGARAFGVRIYRPTVARFFATRFARY
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mRNA from alignment at E_fasciculatus_S2_contig708:1798..3056-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_E_fasciculatus_S2_contig708.15244.1 ID=mRNA_E_fasciculatus_S2_contig708.15244.1|Name=mRNA_E_fasciculatus_S2_contig708.15244.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1259bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig708:1798..3056- (Ectocarpus fasciculatus EfasUO2)
GAACGGCAATTCCGCCATGCTGAAGCTTCTGCTATCGAAAGGTGCCGATC TGGAGACCGAGGCGCGTTTCCCAGCAGGAAGCAGAGCAATTCACGCCGCT ATATCTGGGGAGAATCCTACTGCCTTGTGCGTCCTACTGGAGGCTGGGGC CGACTTCAACAGCCGCGATGGTGCCAAAGGGGAAACTCCGCTTATGTTAA CAGGTCTTGCTGACACAGGAGCTTTACTTGCACGGGAACTGTTCAAGGTC GGGGCCGATCCCTTCGTCAAGAACGCGGATGGCATGAGTGCGATGCACGT AGCGGCAGGCCTGGGCAACCTCGAAGTCATGACCGTGATTTTGGCAAACG CACCATCGGCGCTCAACGTCCTCGACAACAAGGGGTTCACCCCTATGGGC ATTGCTGCACTTAGGGGCCAGCGGCGTGCGGTTTTCCATCTTCTGTCGAA AGGGGCGAGCGACCTGGGGGTCGATGAACAAAGTGCGGCAATTTTCTGGG CTTGCGACGGAGGACATCCACGCATGGTTCGTATGATGCTCGAACACGGC ATCAACAGGGTTGGGGGGCTAGGTGCAATCCCCAACTCTATAGGCGTGGC AGTGCAGGGGCGGCAGGCCAAAATTCTCAAAATGCTGGTTTCCGCCGAGG GAGAGGAGAATCGGCGGAAGTGGGCCGAGTGTGGGTTGGGGAACGGTACT CCGCTCCACCTGGCTGCAGCATGGGTCTCTATAAGGGCGATACATGTGCT GCTCTCGGCTGGAGCGAGGGAGACGCTAACCAACCGCTATGGCAAGGTAT GTGTGTTTGCTCCTATAGAGACCGGGCTTTTGTTACCGGCGGTGGTGGTA TCATAAACGCAGTCCCAGGTGCAAGCCATGGACCTGCCGAGAATTTTCGA GGGCGTTTATTGCGTTGTAATTTGATCATGGGTACGAGTAGGAGCATTCA CCGATCGAAACAAACACATTCGCCCCCCCTCTCTTTCTCCGCCTGCACGT GAAGCTTGCAAGTGAAGAAGTCGGGATAGCCTTGAGGCCACCCGCCGGGA GGAGCCCACGGAAGGAGGCGGCCGTCTTTCGAATGTTGGAGAGGGGACCA GCTTATCGTGCTCGATCGTACGGTTGGCCCACCCTGGATGGCGGCAATGG TACGTCTGACGTGACCCTCTCGTCGAGAACCAAGGGAGCGAGGGCGTTTG GGGTGCGAATTTATCGTCCGACGGTTGCAAGATTCTTCGCAACCCGGTTC GCCAGGTAC
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Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig708:1798..3056-

>mRNA_E_fasciculatus_S2_contig708.15244.1 ID=mRNA_E_fasciculatus_S2_contig708.15244.1|Name=mRNA_E_fasciculatus_S2_contig708.15244.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=1035bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig708:1798..3056- (Ectocarpus fasciculatus EfasUO2)
ATGCTGAAGCTTCTGCTATCGAAAGGTGCCGATCTGGAGACCGAGGCGCG
TTTCCCAGCAGGAAGCAGAGCAATTCACGCCGCTATATCTGGGGAGAATC
CTACTGCCTTGTGCGTCCTACTGGAGGCTGGGGCCGACTTCAACAGCCGC
GATGGTGCCAAAGGGGAAACTCCGCTTATGTTAACAGGTCTTGCTGACAC
AGGAGCTTTACTTGCACGGGAACTGTTCAAGGTCGGGGCCGATCCCTTCG
TCAAGAACGCGGATGGCATGAGTGCGATGCACGTAGCGGCAGGCCTGGGC
AACCTCGAAGTCATGACCGTGATTTTGGCAAACGCACCATCGGCGCTCAA
CGTCCTCGACAACAAGGGGTTCACCCCTATGGGCATTGCTGCACTTAGGG
GCCAGCGGCGTGCGGTTTTCCATCTTCTGTCGAAAGGGGCGAGCGACCTG
GGGGTCGATGAACAAAGTGCGGCAATTTTCTGGGCTTGCGACGGAGGACA
TCCACGCATGGTTCGTATGATGCTCGAACACGGCATCAACAGGGTTGGGG
GGCTAGGTGCAATCCCCAACTCTATAGGCGTGGCAGTGCAGGGGCGGCAG
GCCAAAATTCTCAAAATGCTGGTTTCCGCCGAGGGAGAGGAGAATCGGCG
GAAGTGGGCCGAGTGTGGGTTGGGGAACGGTACTCCGCTCCACCTGGCTG
CAGCATGGGTCTCTATAAGGGCGATACATGTGCTGCTCTCGGCTGGAGCG
AGGGAGACGCTAACCAACCGCTATGGCAAGCTTGCAAGTGAAGAAGTCGG
GATAGCCTTGAGGCCACCCGCCGGGAGGAGCCCACGGAAGGAGGCGGCCG
TCTTTCGAATGTTGGAGAGGGGACCAGCTTATCGTGCTCGATCGTACGGT
TGGCCCACCCTGGATGGCGGCAATGGTACGTCTGACGTGACCCTCTCGTC
GAGAACCAAGGGAGCGAGGGCGTTTGGGGTGCGAATTTATCGTCCGACGG
TTGCAAGATTCTTCGCAACCCGGTTCGCCAGGTAC
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