prot_E_fasciculatus_S2_contig7072.15240.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_E_fasciculatus_S2_contig7072.15240.1
Unique Name	prot_E_fasciculatus_S2_contig7072.15240.1
Type	polypeptide
Organism	Ectocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length	324

Homology

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig7072.15240.1 vs. uniprot
Match: A0A6H5JU07_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JU07_9PHAE)

HSP 1 Score: 489 bits (1259), Expect = 1.940e-170
Identity = 263/326 (80.67%), Postives = 278/326 (85.28%), Query Frame = 0

Query:    1 MTLTTFILTFFVSQSYAMWRSVYKTTRHVQGKLYNLLMLTTTHLRRERPACFDDATGTSTAATGETGGGGERALRGQSRGMRPDRDTGFGQNVGRGGDNVGIGGGGVAWFVGGGEAGASGXXXXXXKASPFTASPPPLPPSPCTCGSRSTKSIPDIRGRGGGSS-NCGCDFPGNSILTDNRMWLAHFERCTRLWQILYYAGCSRKHACFCTNPGLERLHLCGLITEAEIPLLREFPGPVAHRHMPVFQWMVALYLRGLEEGRFVQPVSLTTRIMEQFVGLRDKSGDIGDMVGGRTRTPLAHAVQL-VGVFLLLAPFTLLSERSVGF 324
            MTLTTFILTFFVSQSYAMWRSVY TTRHVQGKLYNLLMLTTTHLRRERPA FDDATGTST+ATGETGGGGER+LRG+ R MRPD D  FG+NVGRG D+V IGGG  AWFVG        XXXXXXKASP  ASPP  PPSPCTCG R T+ IPD    GGGSS  CGC+FPG S+L D R+WLAHFER TRLWQILYYAGCSRKHACFCT+PGLERLHLCGLITEAEIPLLR+FPGPVAHRHMPVFQWMVAL+L GLEEGRF+QPVSLTTR+MEQFVGLRDKSG IGDMVGGRT+   AHAVQL V VFLLL PF L SE  VGF
Sbjct:   94 MTLTTFILTFFVSQSYAMWRSVYMTTRHVQGKLYNLLMLTTTHLRRERPAYFDDATGTSTSATGETGGGGERSLRGEGRSMRPDSDMAFGRNVGRGRDDVRIGGGDAAWFVG--XXXXXXXXXXXXKASPLVASPPLPPPSPCTCGGRGTERIPDTSSGGGGSSCTCGCEFPGKSVLLDTRLWLAHFERYTRLWQILYYAGCSRKHACFCTDPGLERLHLCGLITEAEIPLLRDFPGPVAHRHMPVFQWMVALFLGGLEEGRFLQPVSLTTRMMEQFVGLRDKSGGIGDMVGGRTKLAYAHAVQLLVDVFLLLTPFALFSE--VGF 415

[Close]

BLAST of mRNA_E_fasciculatus_S2_contig7072.15240.1 vs. uniprot
Match: D8LQV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQV7_ECTSI)

HSP 1 Score: 483 bits (1244), Expect = 1.410e-167
Identity = 261/325 (80.31%), Postives = 274/325 (84.31%), Query Frame = 0

Query:    1 MTLTTFILTFFVSQSYAMWRSVYKTTRHVQGKLYNLLMLTTTHLRRERPACFDDATGTSTAATGETGGGGERALRGQSRGMRPDRDTGFGQNVGRGGDNVGIGGGGVAWFVGGGEAGASGXXXXXXKASPFTASPPPLPPSPCTCGSRSTKSIPDIRGRGGGSSNCGCDFPGNSILTDNRMWLAHFERCTRLWQILYYAGCSRKHACFCTNPGLERLHLCGLITEAEIPLLREFPGPVAHRHMPVFQWMVALYLRGLEEGRFVQPVSLTTRIMEQFVGLRDKSGDIGDMVGGRTRTPLAHAVQL-VGVFLLLAPFTLLSERSVGF 324
            MTLTTFILTFFVSQSYAMWRSVYKTTRHVQGKLYNLLMLTTTHLRRERPACFDDATGTSTAA GE+GGGGER LRGQSR +R DRDT  G NVGRGGD+ GIGGG  AWFVG        XXXXXX   P  A       SPCTCGSR T+SIPD  G GGGSSNCG DFPG S+L D+R+WLAHFER TRLW ILYYAGCSRKHACFCT+PGLERLHLCGLITEAEIPLL++FPGPVAHRHMPVFQWMVALYL GLEEGRF+QPVSLTTR+MEQFVGLRDKSG IGDMVGGRT+   AHAVQL V VFLLL PF L SE  VGF
Sbjct:   93 MTLTTFILTFFVSQSYAMWRSVYKTTRHVQGKLYNLLMLTTTHLRRERPACFDDATGTSTAAMGESGGGGERVLRGQSRSVRLDRDTDSGGNVGRGGDDAGIGGGDAAWFVG--XXXXXXXXXXXXXXXPLAAXXXXXXXSPCTCGSRGTESIPDASGGGGGSSNCGRDFPGKSVLWDSRIWLAHFERYTRLWHILYYAGCSRKHACFCTDPGLERLHLCGLITEAEIPLLKDFPGPVAHRHMPVFQWMVALYLGGLEEGRFLQPVSLTTRMMEQFVGLRDKSGGIGDMVGGRTKLAYAHAVQLLVDVFLLLTPFALFSE--VGF 413

The following BLAST results are available for this feature:

BLAST of mRNA_E_fasciculatus_S2_contig7072.15240.1 vs. uniprot

BLAST of mRNA_E_fasciculatus_S2_contig7072.15240.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JU07_9PHAE	1.940e-170	80.67	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LQV7_ECTSI	1.410e-167	80.31	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE	Signal Peptide	coord: 1..17
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 318..324
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_H_REGION	Signal peptide H-region	coord: 2..12
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_N_REGION	Signal peptide N-region	coord: 1..1
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 298..317
None	No IPR available	PHOBIUS	SIGNAL_PEPTIDE_C_REGION	Signal peptide C-region	coord: 13..17
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 18..297
None	No IPR available	SIGNALP_EUK	SignalP-noTM	SignalP-noTM	coord: 1..17 score: 0.692

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
E_fasciculatus_S2_contig7072	contig	E_fasciculatus_S2_contig7072:3520..7331 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO2	2022-07-07

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_E_fasciculatus_S2_contig7072.15240.1	mRNA_E_fasciculatus_S2_contig7072.15240.1	Ectocarpus fasciculatus EfasUO2	mRNA	E_fasciculatus_S2_contig7072 3520..7346 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_E_fasciculatus_S2_contig7072.15240.1 ID=prot_E_fasciculatus_S2_contig7072.15240.1|Name=mRNA_E_fasciculatus_S2_contig7072.15240.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=324bp
MTLTTFILTFFVSQSYAMWRSVYKTTRHVQGKLYNLLMLTTTHLRRERPA
CFDDATGTSTAATGETGGGGERALRGQSRGMRPDRDTGFGQNVGRGGDNV
GIGGGGVAWFVGGGEAGASGGGGGRAKASPFTASPPPLPPSPCTCGSRST
KSIPDIRGRGGGSSNCGCDFPGNSILTDNRMWLAHFERCTRLWQILYYAG
CSRKHACFCTNPGLERLHLCGLITEAEIPLLREFPGPVAHRHMPVFQWMV
ALYLRGLEEGRFVQPVSLTTRIMEQFVGLRDKSGDIGDMVGGRTRTPLAH
AVQLVGVFLLLAPFTLLSERSVGF