prot_E_fasciculatus_S2_contig7060.15227.1 (polypeptide) Ectocarpus fasciculatus EfasUO2

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_E_fasciculatus_S2_contig7060.15227.1
Unique Nameprot_E_fasciculatus_S2_contig7060.15227.1
Typepolypeptide
OrganismEctocarpus fasciculatus EfasUO2 (Ectocarpus fasciculatus EfasUO2)
Sequence length453
Homology
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BLAST of mRNA_E_fasciculatus_S2_contig7060.15227.1 vs. uniprot
Match: D8LFI8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LFI8_ECTSI)

HSP 1 Score: 684 bits (1766), Expect = 4.150e-245
Identity = 355/454 (78.19%), Postives = 387/454 (85.24%), Query Frame = 0 
Query:    1 METRGVCSKKTQHNKSGRAGLRSSPR-CGREAGKNKPGGCDAGLPHHVMLEIVSFLDTRSIVRGRCLSRAFNSDAPALVKTLDFSMGQQSPSAETIKLFSEVRQVNLNGNRDLVHAVVEGLRGWGSSLRLGVSRHRSIKEQEEPLSKAATTALCALPLTELDMNRVVVEFPRLLRMHAWRTLRRLVIRDGLLEDGSLESLFKSIPEGPLPLRHLDLSRNLHGGYDAVSPFADALRSFPDLECLELSACRIVHNSGNLIVRTLLEGACPELKALNLSLNFFTDGLLEFLCEGLGKPGHGLLNLQKLGFGSRVTGDEMITCFDSIGEALAAGGLPKLDFLLLQGDVRPTEVSEVLSLLSGAGCPMLEVVKLERSPRSSHGEDEYAAEEVAQCLFQLVLSDH-PHLREVHVLGMALHEGMDKDQEAGRASAFYRATNDSTWHDLAVASQARGIQVFV 452
            METRG+ +K+ QHNKSGRAGLRSSPR C REA  NKPGGCDA LPHHV+LEIVSFLDTRSIV GRCLSRAF+SDAPALVKTLDF MGQQSPSAETIKLF EVRQVNL+GNRDLVHAVV GLRGWGSSLRL VS H S+ ++EEPLSK ATT LCALPLTELDM  VV+EFP LL M+AWRTL+RLVIRD  L D SLESL KSIPEG LPLRHLDLSRNL GGYD V PFADALRSFPDLE LELSACRI   SG+ IVRTLLEGACP+L+ L+LSLNFFT+GLL  LCEGLG PGHGLLNL+KLGFGSRVTGDEMITCF+ +G+ALAAGGLPKLDFL LQGDV P +VS VLS L G  CPML +VKLERS  S+ GEDE+ AE+ AQ +F LV+S H PHLREVH LGMAL+EGM+K  EAGR SAFYRA N STWH LAV  +ARG+QVFV
Sbjct:    1 METRGMRAKEKQHNKSGRAGLRSSPRRCAREARNNKPGGCDADLPHHVVLEIVSFLDTRSIVSGRCLSRAFSSDAPALVKTLDFHMGQQSPSAETIKLFPEVRQVNLDGNRDLVHAVVAGLRGWGSSLRLDVSLHDSVPQKEEPLSKTATTDLCALPLTELDMMEVVIEFPPLLPMNAWRTLQRLVIRDAFLGDESLESLSKSIPEGALPLRHLDLSRNLFGGYDTVLPFADALRSFPDLEWLELSACRICRGSGDRIVRTLLEGACPKLRTLDLSLNFFTNGLLASLCEGLGAPGHGLLNLRKLGFGSRVTGDEMITCFEKVGKALAAGGLPKLDFLHLQGDVGPRQVSPVLSRLRGGACPMLAMVKLERSLHSTLGEDEFGAEDAAQSMFNLVISGHIPHLREVHALGMALNEGMEKANEAGRDSAFYRARNQSTWHHLAVEGKARGVQVFV 454
The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7060.15227.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LFI8_ECTSI4.150e-24578.19Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO2
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR032675Leucine-rich repeat domain superfamilyGENE3D3.80.10.10coord: 41..419
e-value: 9.6E-20
score: 72.7
NoneNo IPR availableSUPERFAMILY52047RNI-likecoord: 153..321
IPR036047F-box-like domain superfamilySUPERFAMILY81383F-box domaincoord: 42..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
E_fasciculatus_S2_contig7060contigE_fasciculatus_S2_contig7060:2998..4356 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Ectocarpus fasciculatus EfasUO22022-09-29
Diamond blastp: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef902022-09-16
OGS1.0 of Ectocarpus fasciculatus EfasUO22022-07-07
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_E_fasciculatus_S2_contig7060.15227.1mRNA_E_fasciculatus_S2_contig7060.15227.1Ectocarpus fasciculatus EfasUO2mRNAE_fasciculatus_S2_contig7060 2998..5456 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_E_fasciculatus_S2_contig7060.15227.1 ID=prot_E_fasciculatus_S2_contig7060.15227.1|Name=mRNA_E_fasciculatus_S2_contig7060.15227.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=453bp
METRGVCSKKTQHNKSGRAGLRSSPRCGREAGKNKPGGCDAGLPHHVMLE
IVSFLDTRSIVRGRCLSRAFNSDAPALVKTLDFSMGQQSPSAETIKLFSE
VRQVNLNGNRDLVHAVVEGLRGWGSSLRLGVSRHRSIKEQEEPLSKAATT
ALCALPLTELDMNRVVVEFPRLLRMHAWRTLRRLVIRDGLLEDGSLESLF
KSIPEGPLPLRHLDLSRNLHGGYDAVSPFADALRSFPDLECLELSACRIV
HNSGNLIVRTLLEGACPELKALNLSLNFFTDGLLEFLCEGLGKPGHGLLN
LQKLGFGSRVTGDEMITCFDSIGEALAAGGLPKLDFLLLQGDVRPTEVSE
VLSLLSGAGCPMLEVVKLERSPRSSHGEDEYAAEEVAQCLFQLVLSDHPH
LREVHVLGMALHEGMDKDQEAGRASAFYRATNDSTWHDLAVASQARGIQV
FV*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036047F-box-like_dom_sf
IPR032675LRR_dom_sf