mRNA_E_fasciculatus_S2_contig7031.15195.1 (mRNA) Ectocarpus fasciculatus EfasUO2
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Overview
Homology
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase zeta catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0N9_9PHAE) HSP 1 Score: 258 bits (659), Expect = 1.860e-75 Identity = 157/273 (57.51%), Postives = 162/273 (59.34%), Query Frame = 1
Query: 1 QSLYPSMMIAYNLCYTTILG--------------------NRGAPGLGEARRAVQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKV-------------------AGHGDTQGSTPSDDHGGEGFLCQSPGREGMRGWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 702
QSLYPSMMIAYNLCYTTILG + + L A A Q R + A HGDTQGSTPSDDHGGEGF +S REGM GWDPRCIHLAPNTAGFCHPSLRQGILP+MLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV
Sbjct: 2320 QSLYPSMMIAYNLCYTTILGKFDPKTGGTSGSLGALPYPESNTSAALERAAEAHQAWRKRDGRTRSPLAAGRGASQQPPLSCLSPVDEEETPTNAAGVAARSPASSATHPTMETPTGPAVEAEPRSSPHPEDDAKHGDTQGSTPSDDHGGEGFPPRSRDREGMPGWDPRCIHLAPNTAGFCHPSLRQGILPVMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 2592
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase zeta catalytic subunit n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G846_ECTSI) HSP 1 Score: 256 bits (655), Expect = 6.440e-75 Identity = 132/140 (94.29%), Postives = 134/140 (95.71%), Query Frame = 1
Query: 283 AGHGDTQGSTPSDDHGGEGFLCQSPGREGMRGWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 702
A GDTQGSTPSDDHGGEGF +S G+EGM GWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV
Sbjct: 2577 AKQGDTQGSTPSDDHGGEGFSPRSRGKEGMPGWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 2716
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YMN6_9STRA) HSP 1 Score: 145 bits (366), Expect = 2.680e-36 Identity = 100/234 (42.74%), Postives = 117/234 (50.00%), Query Frame = 1
Query: 1 QSLYPSMMIAYNLCYTTILGNRGAPGLGEARRAVQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGHGDTQGSTPSDDHGGEGFLCQSPGREGMRGWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 702
QSLYPSM+IAYNLC++TI+G AGH T +D G + P EG P +++PN A FC R G+LP MLRE+LETR+M+KGAM+RA G+RVL RTL+ARQFALKMISNVTYGYTAAG+SGRMPMAELADAIVE GR TL AA R V
Sbjct: 279 QSLYPSMVIAYNLCFSTIMGR--------------------------------------------------------------------LDLSDAGH------TTTDRAGVDPAGTSPPSSEGTSEGGP---YVSPNGAVFCSTDQRVGVLPRMLRELLETRIMVKGAMKRARDRGERVLERTLDARQFALKMISNVTYGYTAAGYSGRMPMAELADAIVECGRATLEAAIRMV 435
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA-directed (DNA polymerase n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A813A9Q7_9DINO) HSP 1 Score: 130 bits (328), Expect = 7.190e-33 Identity = 91/234 (38.89%), Postives = 115/234 (49.15%), Query Frame = 1
Query: 1 QSLYPSMMIAYNLCYTTILGNRGAPGLGEARRAVQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGHGDTQGSTPSDDHGGEGFLCQSPGREGMRGWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 702
QSLYPS++IAYN+CY+T LG +G+ R H QG GFL SP G+ + +APN A F +R+G+LPLML +ILETRVM+K AM+R E VL R L+ARQFALKMI+NVTYGYT+AGFSGRMP AE+ADAIV + R+TL+A+ RT+
Sbjct: 25 QSLYPSIVIAYNMCYSTCLGRLSPRQVGKWFERCSTSR----------------------------------------------------------HISCQGKLNEK----LGFLEYSPPSAGLER-AAKDAFIAPNGAVFVSRHVRRGVLPLMLNDILETRVMVKNAMKRKEAVNDPVLTRILHARQFALKMIANVTYGYTSAGFSGRMPCAEIADAIVHTARRTLLASMRTI 195
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase (Fragment) n=1 Tax=Dunaliella tertiolecta TaxID=3047 RepID=A0A7S3VKE1_DUNTE) HSP 1 Score: 135 bits (340), Expect = 1.000e-32 Identity = 111/227 (48.90%), Postives = 132/227 (58.15%), Query Frame = 1
Query: 1 QSLYPSMMIAYNLCYTTILGNRGAPGLGEARRAVQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGHGDTQGSTPSDDHGGEGFLCQSPGREGMRGWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTL 681
QSLYPS +IAYNLCY+T +G G A A++ Q XXXXXXXXXX XXXXXXX +AG+G QG G +L DP+ + + PN GF S R G+LP ML EIL+TRVM+KGAM+R A + LARTL+ARQFALK+I+NVTYGYTAAG+SGRMP AELADAIV+SGRQTL
Sbjct: 550 QSLYPSQIIAYNLCYSTCIGRPAHARAGAAAAALKAQXXXXXXXXXXXRATDCGAGVGALGPAAXXXXXXXAPHAYAEGNGGHAEEADAG---LAGNGLPQGLR----FGCTSYLLPYGSLSPDGPLDPQDLVVTPNGVGFVDASTRPGVLPRMLSEILDTRVMVKGAMKRLTPA-DKALARTLDARQFALKLIANVTYGYTAAGYSGRMPFAELADAIVQSGRQTL 768
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA-directed (DNA polymerase n=1 Tax=Edaphochlamys debaryana TaxID=47281 RepID=A0A836BV74_9CHLO) HSP 1 Score: 127 bits (320), Expect = 5.340e-30 Identity = 65/100 (65.00%), Postives = 79/100 (79.00%), Query Frame = 1
Query: 382 DPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTL 681
DP + ++PN F P +R G+LP ML EILETR+M+KGAM+RA G +VL R LNARQ LK+I+NVTYGYTAAGFSGR+P AELAD+IV+SGRQTL
Sbjct: 4283 DPERLVISPNGVAFVPPEVRPGVLPRMLHEILETRLMVKGAMKRA-GPADKVLLRVLNARQLGLKLIANVTYGYTAAGFSGRLPFAELADSIVQSGRQTL 4381
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase n=1 Tax=Phytophthora cactorum TaxID=29920 RepID=A0A329T4L1_9STRA) HSP 1 Score: 126 bits (316), Expect = 1.700e-29 Identity = 66/103 (64.08%), Postives = 80/103 (77.67%), Query Frame = 1
Query: 394 IHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 702
+ +APN FC S R G+LPL+L EIL TR+M+K +M+ A+GA Q L + LNARQ ALKMISNVTYGYTAAGFSGRMP A+LADAIV++GR TL AA R +
Sbjct: 1177 VIIAPNGTLFCPKSYRHGVLPLILDEILSTRIMVKKSMKSAKGASQERLEKVLNARQLALKMISNVTYGYTAAGFSGRMPCAQLADAIVQTGRCTLEAAVRLI 1279
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase (Fragment) n=1 Tax=Haematococcus lacustris TaxID=44745 RepID=A0A699Z3X2_HAELA) HSP 1 Score: 125 bits (313), Expect = 1.800e-29 Identity = 95/235 (40.43%), Postives = 109/235 (46.38%), Query Frame = 1
Query: 1 QSLYPSMMIAYNLCYTTILGNRGAPGLGEARRAVQRQRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKVAGHGDTQGSTPSDDHGGEGFLCQSPGREGMRG-WDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 702
QSLYPS MIAYNLCY+T LG G+A A+ AG G G T PG G DP + +APN + S+R G+LP ML E+L TRVM K AM+R A RVL R LNARQ LK+ISNVTYGYT+AGFSGRMP AELAD+IV+SGRQTL A R V
Sbjct: 248 QSLYPSQMIAYNLCYSTCLGRPSHVRAGQAAAALA----------------------------------------SADSGTDPAAGAKAGTAGAAGVGVRLGVTS---------YAVPPGVMTAGGPLDPDSLVIAPNGVAYAPASVRPGVLPRMLSELLNTRVMTKAAMKRH--AADRVLQRVLNARQMGLKLISNVTYGYTSAGFSGRMPFAELADSIVQSGRQTLENAIRLV 431
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WHC9_GLOUD) HSP 1 Score: 125 bits (314), Expect = 3.110e-29 Identity = 73/122 (59.84%), Postives = 87/122 (71.31%), Query Frame = 1
Query: 337 GFLCQSPGREGMRGWDPRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTV 702
G + SP REG+ I + PN FC S R G+LPL+L EIL TR+M+K +M++A+ A Q L + LNARQ ALKMISNVTYGYTAAGFSGRMP A+LADAIV+SGR TL AA R V
Sbjct: 1018 GVVDFSPSREGILECKDDVI-IVPNGTLFCPKSHRHGMLPLILDEILSTRIMVKKSMKQAKEANQERLEKVLNARQLALKMISNVTYGYTAAGFSGRMPCAQLADAIVQSGRCTLEAAVRMV 1138
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Match: DNA (polymerase zeta catalytic subunit n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VE15_9CHLO) HSP 1 Score: 125 bits (314), Expect = 3.280e-29 Identity = 67/107 (62.62%), Postives = 83/107 (77.57%), Query Frame = 1
Query: 385 PRCIHLAPNTAGFCHPSLRQGILPLMLREILETRVMIKGAMRRAEGAGQRVLARTLNARQFALKMISNVTYGYTAAGFSGRMPMAELADAIVESGRQTLIAAARTVS 705
P + +APN F +R G+LP +L+EIL TR+M+KGAM+RA + VL R LNARQF LK+I+NVTYGYTAAGFSGRMPMAELADAIV+SGR+TL +A R V+
Sbjct: 2109 PERLVVAPNGVAFAPHDVRPGVLPRLLQEILNTRIMVKGAMKRAPKPAK-VLLRCLNARQFGLKLIANVTYGYTAAGFSGRMPMAELADAIVQSGRETLESAIRMVN 2214 The following BLAST results are available for this feature:
BLAST of mRNA_E_fasciculatus_S2_contig7031.15195.1 vs.
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Ectocarpus fasciculatus EfasUO2 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_E_fasciculatus_S2_contig7031.15195.1 >prot_E_fasciculatus_S2_contig7031.15195.1 ID=prot_E_fasciculatus_S2_contig7031.15195.1|Name=mRNA_E_fasciculatus_S2_contig7031.15195.1|organism=Ectocarpus fasciculatus EfasUO2|type=polypeptide|length=229bp MMIAYNLCYTTILGNRGAPGLGEARRAVQRQRAAAAAAAASSSSQQQEESback to top mRNA from alignment at E_fasciculatus_S2_contig7031:53..1510- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_E_fasciculatus_S2_contig7031.15195.1 ID=mRNA_E_fasciculatus_S2_contig7031.15195.1|Name=mRNA_E_fasciculatus_S2_contig7031.15195.1|organism=Ectocarpus fasciculatus EfasUO2|type=mRNA|length=1458bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7031:53..1510- (Ectocarpus fasciculatus EfasUO2)back to top Coding sequence (CDS) from alignment at E_fasciculatus_S2_contig7031:53..1510- >mRNA_E_fasciculatus_S2_contig7031.15195.1 ID=mRNA_E_fasciculatus_S2_contig7031.15195.1|Name=mRNA_E_fasciculatus_S2_contig7031.15195.1|organism=Ectocarpus fasciculatus EfasUO2|type=CDS|length=687bp|location=Sequence derived from alignment at E_fasciculatus_S2_contig7031:53..1510- (Ectocarpus fasciculatus EfasUO2)back to top |